Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A302:A301
Extra
PDB:
ATOM 1 O3' U A 301 1.120 145.016 53.117 1.00 59.34 O
ATOM 2 P G A 302 1.644 146.529 53.205 1.00 59.58 P
ATOM 3 OP1 G A 302 1.678 146.883 54.629 1.00 60.49 O
ATOM 4 OP2 G A 302 0.893 147.393 52.251 1.00 61.05 O
ATOM 5 O5' G A 302 3.154 146.447 52.714 1.00 59.77 O
ATOM 6 C5' G A 302 4.167 145.830 53.522 1.00 57.65 C
ATOM 7 C4' G A 302 5.484 145.814 52.784 1.00 56.86 C
ATOM 8 O4' G A 302 5.342 145.074 51.545 1.00 56.80 O
ATOM 9 C3' G A 302 5.999 147.167 52.326 1.00 56.24 C
ATOM 10 O3' G A 302 6.677 147.862 53.358 1.00 56.34 O
ATOM 11 C2' G A 302 6.971 146.768 51.239 1.00 56.29 C
ATOM 12 O2' G A 302 8.140 146.279 51.856 1.00 55.51 O
ATOM 13 C1' G A 302 6.199 145.633 50.559 1.00 57.88 C
ATOM 14 N9 G A 302 5.388 146.106 49.434 1.00 60.84 N
ATOM 15 C8 G A 302 4.097 146.588 49.465 1.00 62.12 C
ATOM 16 N7 G A 302 3.678 147.008 48.301 1.00 63.19 N
ATOM 17 C5 G A 302 4.750 146.779 47.447 1.00 63.43 C
ATOM 18 C6 G A 302 4.905 147.054 46.057 1.00 64.67 C
ATOM 19 O6 G A 302 4.107 147.598 45.277 1.00 66.81 O
ATOM 20 N1 G A 302 6.149 146.639 45.590 1.00 64.71 N
ATOM 21 C2 G A 302 7.125 146.050 46.354 1.00 64.41 C
ATOM 22 N2 G A 302 8.251 145.713 45.716 1.00 63.36 N
ATOM 23 N3 G A 302 7.003 145.807 47.647 1.00 63.96 N
ATOM 24 C4 G A 302 5.800 146.195 48.125 1.00 62.38 C
ATOM 25 P G A 303 6.541 149.456 53.458 1.00 56.93 P
ATOM 26 OP1 G A 303 7.297 149.963 54.639 1.00 57.67 O
ATOM 27 OP2 G A 303 5.101 149.716 53.353 1.00 59.12 O
ATOM 28 O5' G A 303 7.226 149.995 52.130 1.00 57.03 O
TER
ATOM 1 O3' U B 300 -3.447 144.603 49.239 1.00 65.17 O
ATOM 2 P U B 301 -2.451 145.719 49.844 1.00 65.88 P
ATOM 3 OP1 U B 301 -3.057 146.341 51.046 1.00 64.93 O
ATOM 4 OP2 U B 301 -1.950 146.592 48.749 1.00 66.22 O
ATOM 5 O5' U B 301 -1.223 144.858 50.356 1.00 65.41 O
ATOM 6 C5' U B 301 -1.373 143.902 51.406 1.00 63.74 C
ATOM 7 C4' U B 301 -0.027 143.329 51.749 1.00 62.26 C
ATOM 8 O4' U B 301 0.404 142.453 50.676 1.00 61.46 O
ATOM 9 C3' U B 301 1.094 144.354 51.859 1.00 61.30 C
ATOM 10 O3' U B 301 1.120 145.016 53.117 1.00 59.34 O
ATOM 11 C2' U B 301 2.325 143.501 51.607 1.00 61.09 C
ATOM 12 O2' U B 301 2.690 142.744 52.734 1.00 61.20 O
ATOM 13 C1' U B 301 1.809 142.555 50.524 1.00 61.46 C
ATOM 14 N1 U B 301 2.116 143.071 49.183 1.00 62.54 N
ATOM 15 C2 U B 301 3.351 142.744 48.670 1.00 62.56 C
ATOM 16 O2 U B 301 4.147 142.042 49.271 1.00 62.71 O
ATOM 17 N3 U B 301 3.623 143.268 47.430 1.00 63.29 N
ATOM 18 C4 U B 301 2.801 144.068 46.657 1.00 64.33 C
ATOM 19 O4 U B 301 3.207 144.473 45.565 1.00 64.37 O
ATOM 20 C5 U B 301 1.524 144.362 47.246 1.00 65.07 C
ATOM 21 C6 U B 301 1.227 143.864 48.459 1.00 64.27 C
ATOM 22 P G B 302 1.644 146.529 53.205 1.00 59.58 P
ATOM 23 OP1 G B 302 1.678 146.883 54.629 1.00 60.49 O
ATOM 24 OP2 G B 302 0.893 147.393 52.251 1.00 61.05 O
ATOM 25 O5' G B 302 3.154 146.447 52.714 1.00 59.77 O
TER
ATOM 2 P G A 302 1.644 146.529 53.205 1.00 59.58 P
ATOM 3 OP1 G A 302 1.678 146.883 54.629 1.00 60.49 O
ATOM 4 OP2 G A 302 0.893 147.393 52.251 1.00 61.05 O
ATOM 5 O5' G A 302 3.154 146.447 52.714 1.00 59.77 O
ATOM 6 C5' G A 302 4.167 145.830 53.522 1.00 57.65 C
ATOM 7 C4' G A 302 5.484 145.814 52.784 1.00 56.86 C
ATOM 8 O4' G A 302 5.342 145.074 51.545 1.00 56.80 O
ATOM 9 C3' G A 302 5.999 147.167 52.326 1.00 56.24 C
ATOM 10 O3' G A 302 6.677 147.862 53.358 1.00 56.34 O
ATOM 11 C2' G A 302 6.971 146.768 51.239 1.00 56.29 C
ATOM 12 O2' G A 302 8.140 146.279 51.856 1.00 55.51 O
ATOM 13 C1' G A 302 6.199 145.633 50.559 1.00 57.88 C
ATOM 14 N9 G A 302 5.388 146.106 49.434 1.00 60.84 N
ATOM 15 C8 G A 302 4.097 146.588 49.465 1.00 62.12 C
ATOM 16 N7 G A 302 3.678 147.008 48.301 1.00 63.19 N
ATOM 17 C5 G A 302 4.750 146.779 47.447 1.00 63.43 C
ATOM 18 C6 G A 302 4.905 147.054 46.057 1.00 64.67 C
ATOM 19 O6 G A 302 4.107 147.598 45.277 1.00 66.81 O
ATOM 20 N1 G A 302 6.149 146.639 45.590 1.00 64.71 N
ATOM 21 C2 G A 302 7.125 146.050 46.354 1.00 64.41 C
ATOM 22 N2 G A 302 8.251 145.713 45.716 1.00 63.36 N
ATOM 23 N3 G A 302 7.003 145.807 47.647 1.00 63.96 N
ATOM 24 C4 G A 302 5.800 146.195 48.125 1.00 62.38 C
ATOM 25 P G A 303 6.541 149.456 53.458 1.00 56.93 P
ATOM 26 OP1 G A 303 7.297 149.963 54.639 1.00 57.67 O
ATOM 27 OP2 G A 303 5.101 149.716 53.353 1.00 59.12 O
ATOM 28 O5' G A 303 7.226 149.995 52.130 1.00 57.03 O
TER
ATOM 1 O3' U B 300 -3.447 144.603 49.239 1.00 65.17 O
ATOM 2 P U B 301 -2.451 145.719 49.844 1.00 65.88 P
ATOM 3 OP1 U B 301 -3.057 146.341 51.046 1.00 64.93 O
ATOM 4 OP2 U B 301 -1.950 146.592 48.749 1.00 66.22 O
ATOM 5 O5' U B 301 -1.223 144.858 50.356 1.00 65.41 O
ATOM 6 C5' U B 301 -1.373 143.902 51.406 1.00 63.74 C
ATOM 7 C4' U B 301 -0.027 143.329 51.749 1.00 62.26 C
ATOM 8 O4' U B 301 0.404 142.453 50.676 1.00 61.46 O
ATOM 9 C3' U B 301 1.094 144.354 51.859 1.00 61.30 C
ATOM 10 O3' U B 301 1.120 145.016 53.117 1.00 59.34 O
ATOM 11 C2' U B 301 2.325 143.501 51.607 1.00 61.09 C
ATOM 12 O2' U B 301 2.690 142.744 52.734 1.00 61.20 O
ATOM 13 C1' U B 301 1.809 142.555 50.524 1.00 61.46 C
ATOM 14 N1 U B 301 2.116 143.071 49.183 1.00 62.54 N
ATOM 15 C2 U B 301 3.351 142.744 48.670 1.00 62.56 C
ATOM 16 O2 U B 301 4.147 142.042 49.271 1.00 62.71 O
ATOM 17 N3 U B 301 3.623 143.268 47.430 1.00 63.29 N
ATOM 18 C4 U B 301 2.801 144.068 46.657 1.00 64.33 C
ATOM 19 O4 U B 301 3.207 144.473 45.565 1.00 64.37 O
ATOM 20 C5 U B 301 1.524 144.362 47.246 1.00 65.07 C
ATOM 21 C6 U B 301 1.227 143.864 48.459 1.00 64.27 C
ATOM 22 P G B 302 1.644 146.529 53.205 1.00 59.58 P
ATOM 23 OP1 G B 302 1.678 146.883 54.629 1.00 60.49 O
ATOM 24 OP2 G B 302 0.893 147.393 52.251 1.00 61.05 O
ATOM 25 O5' G B 302 3.154 146.447 52.714 1.00 59.77 O
TER
Atoms:
OP1: (1.678,146.883,54.629)
OP2: (0.893,147.393,52.251)
C3': (5.999,147.167,52.326)
C1': (6.199,145.633,50.559)
C5': (4.167,145.830,53.522)
O6: (4.107,147.598,45.277)
O4': (5.342,145.074,51.545)
C8: (4.097,146.588,49.465)
C2: (7.125,146.050,46.354)
C6: (4.905,147.054,46.057)
C5: (4.750,146.779,47.447)
C4: (5.800,146.195,48.125)
P: (1.644,146.529,53.205)
C4': (5.484,145.814,52.784)
C2': (6.971,146.768,51.239)
O2': (8.140,146.279,51.856)
N1: (6.149,146.639,45.590)
N2: (8.251,145.713,45.716)
N3: (7.003,145.807,47.647)
N7: (3.678,147.008,48.301)
N9: (5.388,146.106,49.434)
O5': (3.154,146.447,52.714)
O3': (6.677,147.862,53.358)
OP2: (0.893,147.393,52.251)
C3': (5.999,147.167,52.326)
C1': (6.199,145.633,50.559)
C5': (4.167,145.830,53.522)
O6: (4.107,147.598,45.277)
O4': (5.342,145.074,51.545)
C8: (4.097,146.588,49.465)
C2: (7.125,146.050,46.354)
C6: (4.905,147.054,46.057)
C5: (4.750,146.779,47.447)
C4: (5.800,146.195,48.125)
P: (1.644,146.529,53.205)
C4': (5.484,145.814,52.784)
C2': (6.971,146.768,51.239)
O2': (8.140,146.279,51.856)
N1: (6.149,146.639,45.590)
N2: (8.251,145.713,45.716)
N3: (7.003,145.807,47.647)
N7: (3.678,147.008,48.301)
N9: (5.388,146.106,49.434)
O5': (3.154,146.447,52.714)
O3': (6.677,147.862,53.358)
C4: (2.801,144.068,46.657)
N3: (3.623,143.268,47.430)
OP1: (-3.057,146.341,51.046)
OP2: (-1.950,146.592,48.749)
C2: (3.351,142.744,48.670)
C1': (1.809,142.555,50.524)
C3': (1.094,144.354,51.859)
O5': (-1.223,144.858,50.356)
O4': (0.404,142.453,50.676)
C5': (-1.373,143.902,51.406)
P: (-2.451,145.719,49.844)
C4': (-0.027,143.329,51.749)
C2': (2.325,143.501,51.607)
O2': (2.690,142.744,52.734)
N1: (2.116,143.071,49.183)
O4: (3.207,144.473,45.565)
O2: (4.147,142.042,49.271)
C6: (1.227,143.864,48.459)
C5: (1.524,144.362,47.246)
O3': (1.120,145.016,53.117)
N3: (3.623,143.268,47.430)
OP1: (-3.057,146.341,51.046)
OP2: (-1.950,146.592,48.749)
C2: (3.351,142.744,48.670)
C1': (1.809,142.555,50.524)
C3': (1.094,144.354,51.859)
O5': (-1.223,144.858,50.356)
O4': (0.404,142.453,50.676)
C5': (-1.373,143.902,51.406)
P: (-2.451,145.719,49.844)
C4': (-0.027,143.329,51.749)
C2': (2.325,143.501,51.607)
O2': (2.690,142.744,52.734)
N1: (2.116,143.071,49.183)
O4: (3.207,144.473,45.565)
O2: (4.147,142.042,49.271)
C6: (1.227,143.864,48.459)
C5: (1.524,144.362,47.246)
O3': (1.120,145.016,53.117)
Image (generated by PyMOL):