ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1842:A1841

Extra

PDB:
ATOM 1 O3' U A1841 108.961 126.254 89.207 1.00 39.37 O
ATOM 2 P G A1842 108.074 127.450 89.824 1.00 42.05 P
ATOM 3 OP1 G A1842 108.163 127.290 91.277 1.00 41.39 O
ATOM 4 OP2 G A1842 106.725 127.593 89.179 1.00 41.12 O
ATOM 5 O5' G A1842 108.918 128.754 89.494 1.00 43.75 O
ATOM 6 C5' G A1842 110.236 128.932 90.024 1.00 46.49 C
ATOM 7 C4' G A1842 110.830 130.183 89.448 1.00 46.80 C
ATOM 8 O4' G A1842 110.508 130.204 88.029 1.00 47.52 O
ATOM 9 C3' G A1842 110.242 131.468 90.008 1.00 47.46 C
ATOM 10 O3' G A1842 111.180 132.514 89.881 1.00 47.99 O
ATOM 11 C2' G A1842 109.141 131.802 89.026 1.00 48.22 C
ATOM 12 O2' G A1842 108.888 133.189 88.961 1.00 50.41 O
ATOM 13 C1' G A1842 109.773 131.363 87.720 1.00 48.10 C
ATOM 14 N9 G A1842 108.763 131.030 86.729 1.00 49.16 N
ATOM 15 C8 G A1842 107.815 130.035 86.794 1.00 49.85 C
ATOM 16 N7 G A1842 107.081 129.959 85.718 1.00 50.50 N
ATOM 17 C5 G A1842 107.575 130.967 84.899 1.00 49.13 C
ATOM 18 C6 G A1842 107.210 131.344 83.586 1.00 48.54 C
ATOM 19 O6 G A1842 106.376 130.830 82.841 1.00 47.00 O
ATOM 20 N1 G A1842 107.952 132.433 83.139 1.00 48.70 N
ATOM 21 C2 G A1842 108.938 133.063 83.849 1.00 48.05 C
ATOM 22 N2 G A1842 109.524 134.084 83.229 1.00 46.04 N
ATOM 23 N3 G A1842 109.310 132.708 85.069 1.00 48.10 N
ATOM 24 C4 G A1842 108.591 131.655 85.525 1.00 49.33 C
ATOM 25 P A A1843 112.036 132.951 91.144 1.00 47.57 P
ATOM 26 OP1 A A1843 113.104 131.921 91.123 1.00 47.66 O
ATOM 27 OP2 A A1843 111.138 133.077 92.336 1.00 45.67 O
ATOM 28 O5' A A1843 112.609 134.379 90.744 1.00 44.50 O
TER

ATOM 1 O3' C B1840 107.078 122.814 84.267 1.00 38.94 O
ATOM 2 P U B1841 106.398 123.880 85.237 1.00 37.52 P
ATOM 3 OP1 U B1841 105.644 123.198 86.314 1.00 36.46 O
ATOM 4 OP2 U B1841 105.720 124.833 84.351 1.00 37.22 O
ATOM 5 O5' U B1841 107.628 124.616 85.904 1.00 39.71 O
ATOM 6 C5' U B1841 108.304 124.043 87.026 1.00 39.92 C
ATOM 7 C4' U B1841 109.539 124.839 87.329 1.00 40.21 C
ATOM 8 O4' U B1841 110.235 125.053 86.076 1.00 40.53 O
ATOM 9 C3' U B1841 109.280 126.248 87.822 1.00 39.90 C
ATOM 10 O3' U B1841 108.961 126.254 89.207 1.00 39.37 O
ATOM 11 C2' U B1841 110.583 126.947 87.460 1.00 39.95 C
ATOM 12 O2' U B1841 111.677 126.649 88.306 1.00 41.05 O
ATOM 13 C1' U B1841 110.866 126.323 86.098 1.00 41.03 C
ATOM 14 N1 U B1841 110.330 127.155 85.012 1.00 41.92 N
ATOM 15 C2 U B1841 110.962 128.369 84.775 1.00 42.46 C
ATOM 16 O2 U B1841 111.935 128.756 85.420 1.00 44.28 O
ATOM 17 N3 U B1841 110.415 129.112 83.762 1.00 40.06 N
ATOM 18 C4 U B1841 109.336 128.781 82.989 1.00 39.01 C
ATOM 19 O4 U B1841 109.003 129.526 82.075 1.00 38.55 O
ATOM 20 C5 U B1841 108.742 127.520 83.294 1.00 41.30 C
ATOM 21 C6 U B1841 109.249 126.765 84.265 1.00 41.34 C
ATOM 22 P G B1842 108.074 127.450 89.824 1.00 42.05 P
ATOM 23 OP1 G B1842 108.163 127.290 91.277 1.00 41.39 O
ATOM 24 OP2 G B1842 106.725 127.593 89.179 1.00 41.12 O
ATOM 25 O5' G B1842 108.918 128.754 89.494 1.00 43.75 O
TER

Atoms:
OP1: (108.163,127.290,91.277)
OP2: (106.725,127.593,89.179)
C3': (110.242,131.468,90.008)
C1': (109.773,131.363,87.720)
C5': (110.236,128.932,90.024)
O6: (106.376,130.830,82.841)
O4': (110.508,130.204,88.029)
C8: (107.815,130.035,86.794)
C2: (108.938,133.063,83.849)
C6: (107.210,131.344,83.586)
C5: (107.575,130.967,84.899)
C4: (108.591,131.655,85.525)
P: (108.074,127.450,89.824)
C4': (110.830,130.183,89.448)
C2': (109.141,131.802,89.026)
O2': (108.888,133.189,88.961)
N1: (107.952,132.433,83.139)
N2: (109.524,134.084,83.229)
N3: (109.310,132.708,85.069)
N7: (107.081,129.959,85.718)
N9: (108.763,131.030,86.729)
O5': (108.918,128.754,89.494)
O3': (111.180,132.514,89.881)
C4: (109.336,128.781,82.989)
N3: (110.415,129.112,83.762)
OP1: (105.644,123.198,86.314)
OP2: (105.720,124.833,84.351)
C2: (110.962,128.369,84.775)
C1': (110.866,126.323,86.098)
C3': (109.280,126.248,87.822)
O5': (107.628,124.616,85.904)
O4': (110.235,125.053,86.076)
C5': (108.304,124.043,87.026)
P: (106.398,123.880,85.237)
C4': (109.539,124.839,87.329)
C2': (110.583,126.947,87.460)
O2': (111.677,126.649,88.306)
N1: (110.330,127.155,85.012)
O4: (109.003,129.526,82.075)
O2: (111.935,128.756,85.420)
C6: (109.249,126.765,84.265)
C5: (108.742,127.520,83.294)
O3': (108.961,126.254,89.207)
Image (generated by PyMOL):
PyMOL image
show in jmol