ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:11744:11743

Extra

PDB:
ATOM 1 O3' A A1743 18.902 12.406 139.350 1.00 53.21 O
ATOM 2 P A A1744 18.685 13.163 140.744 1.00 59.32 P
ATOM 3 OP1 A A1744 18.817 12.155 141.817 1.00 59.64 O
ATOM 4 OP2 A A1744 17.423 13.909 140.643 1.00 59.48 O
ATOM 5 O5' A A1744 19.921 14.163 140.774 1.00 59.43 O
ATOM 6 C5' A A1744 21.230 13.671 141.024 1.00 59.39 C
ATOM 7 C4' A A1744 22.279 14.683 140.673 1.00 59.36 C
ATOM 8 O4' A A1744 21.979 15.254 139.383 1.00 58.88 O
ATOM 9 C3' A A1744 22.385 15.890 141.594 1.00 60.01 C
ATOM 10 O3' A A1744 23.170 15.635 142.735 1.00 60.48 O
ATOM 11 C2' A A1744 23.021 16.907 140.696 1.00 59.75 C
ATOM 12 O2' A A1744 24.383 16.586 140.546 1.00 59.57 O
ATOM 13 C1' A A1744 22.314 16.618 139.378 1.00 59.11 C
ATOM 14 N9 A A1744 21.068 17.388 139.245 1.00 59.26 N
ATOM 15 C8 A A1744 19.827 16.985 139.646 1.00 59.44 C
ATOM 16 N7 A A1744 18.922 17.891 139.387 1.00 59.55 N
ATOM 17 C5 A A1744 19.607 18.945 138.782 1.00 59.45 C
ATOM 18 C6 A A1744 19.229 20.198 138.264 1.00 59.50 C
ATOM 19 N6 A A1744 18.003 20.707 138.236 1.00 59.68 N
ATOM 20 N1 A A1744 20.171 20.972 137.731 1.00 59.37 N
ATOM 21 C2 A A1744 21.413 20.518 137.721 1.00 59.20 C
ATOM 22 N3 A A1744 21.879 19.367 138.170 1.00 59.13 N
ATOM 23 C4 A A1744 20.924 18.624 138.695 1.00 59.27 C
ATOM 24 P U A1745 22.567 15.867 144.194 1.00 58.29 P
ATOM 25 OP1 U A1745 23.651 15.564 145.163 1.00 58.67 O
ATOM 26 OP2 U A1745 21.295 15.094 144.254 1.00 58.24 O
ATOM 27 O5' U A1745 22.274 17.413 144.211 1.00 58.61 O
TER

ATOM 1 O3' A B1742 14.544 11.810 134.922 1.00 49.55 O
ATOM 2 P A B1743 14.399 12.220 136.431 1.00 52.20 P
ATOM 3 OP1 A B1743 13.957 11.026 137.187 1.00 52.38 O
ATOM 4 OP2 A B1743 13.565 13.430 136.460 1.00 52.49 O
ATOM 5 O5' A B1743 15.885 12.564 136.807 1.00 52.30 O
ATOM 6 C5' A B1743 16.817 11.529 137.039 1.00 52.17 C
ATOM 7 C4' A B1743 18.217 12.055 137.023 1.00 52.15 C
ATOM 8 O4' A B1743 18.439 12.804 135.794 1.00 51.72 O
ATOM 9 C3' A B1743 18.567 13.043 138.128 1.00 52.78 C
ATOM 10 O3' A B1743 18.902 12.406 139.350 1.00 53.21 O
ATOM 11 C2' A B1743 19.714 13.812 137.508 1.00 52.57 C
ATOM 12 O2' A B1743 20.882 13.005 137.506 1.00 52.36 O
ATOM 13 C1' A B1743 19.222 13.937 136.064 1.00 51.98 C
ATOM 14 N9 A B1743 18.373 15.107 135.871 1.00 52.16 N
ATOM 15 C8 A B1743 17.021 15.073 135.827 1.00 52.23 C
ATOM 16 N7 A B1743 16.516 16.245 135.643 1.00 52.41 N
ATOM 17 C5 A B1743 17.618 17.102 135.561 1.00 52.45 C
ATOM 18 C6 A B1743 17.765 18.491 135.369 1.00 52.64 C
ATOM 19 N6 A B1743 16.760 19.352 135.219 1.00 52.82 N
ATOM 20 N1 A B1743 18.994 19.002 135.327 1.00 52.64 N
ATOM 21 C2 A B1743 20.021 18.178 135.473 1.00 52.47 C
ATOM 22 N3 A B1743 20.031 16.875 135.676 1.00 52.30 N
ATOM 23 C4 A B1743 18.777 16.394 135.700 1.00 52.30 C
ATOM 24 P A B1744 18.685 13.163 140.744 1.00 59.32 P
ATOM 25 OP1 A B1744 18.817 12.155 141.817 1.00 59.64 O
ATOM 26 OP2 A B1744 17.423 13.909 140.643 1.00 59.48 O
ATOM 27 O5' A B1744 19.921 14.163 140.774 1.00 59.43 O
TER

Atoms:
OP1: (18.817,12.155,141.817)
OP2: (17.423,13.909,140.643)
C3': (22.385,15.890,141.594)
C1': (22.314,16.618,139.378)
C5': (21.230,13.671,141.024)
O4': (21.979,15.254,139.383)
C8: (19.827,16.985,139.646)
O2': (24.383,16.586,140.546)
C6: (19.229,20.198,138.264)
C5: (19.607,18.945,138.782)
C4: (20.924,18.624,138.695)
P: (18.685,13.163,140.744)
C4': (22.279,14.683,140.673)
C2': (23.021,16.907,140.696)
C2: (21.413,20.518,137.721)
N1: (20.171,20.972,137.731)
N3: (21.879,19.367,138.170)
N6: (18.003,20.707,138.236)
N7: (18.922,17.891,139.387)
N9: (21.068,17.388,139.245)
O5': (19.921,14.163,140.774)
O3': (23.170,15.635,142.735)
OP1: (13.957,11.026,137.187)
OP2: (13.565,13.430,136.460)
C3': (18.567,13.043,138.128)
C1': (19.222,13.937,136.064)
C5': (16.817,11.529,137.039)
O4': (18.439,12.804,135.794)
C8: (17.021,15.073,135.827)
O2': (20.882,13.005,137.506)
C6: (17.765,18.491,135.369)
C5: (17.618,17.102,135.561)
C4: (18.777,16.394,135.700)
P: (14.399,12.220,136.431)
C4': (18.217,12.055,137.023)
C2': (19.714,13.812,137.508)
C2: (20.021,18.178,135.473)
N1: (18.994,19.002,135.327)
N3: (20.031,16.875,135.676)
N6: (16.760,19.352,135.219)
N7: (16.516,16.245,135.643)
N9: (18.373,15.107,135.871)
O5': (15.885,12.564,136.807)
O3': (18.902,12.406,139.350)
Image (generated by PyMOL):
PyMOL image
show in jmol