Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02016:02015
Extra
PDB:
ATOM 1 O3' U A2015 42.386 108.780 109.860 1.00 34.73 O
ATOM 2 P G A2016 43.594 108.075 109.071 1.00 35.35 P
ATOM 3 OP1 G A2016 43.253 106.637 108.939 1.00 35.60 O
ATOM 4 OP2 G A2016 44.875 108.463 109.717 1.00 33.36 O
ATOM 5 O5' G A2016 43.563 108.758 107.633 1.00 33.49 O
ATOM 6 C5' G A2016 42.506 108.511 106.700 1.00 29.80 C
ATOM 7 C4' G A2016 42.609 109.480 105.549 1.00 31.42 C
ATOM 8 O4' G A2016 42.521 110.837 106.064 1.00 31.88 O
ATOM 9 C3' G A2016 43.925 109.461 104.793 1.00 31.13 C
ATOM 10 O3' G A2016 43.946 108.424 103.813 1.00 33.39 O
ATOM 11 C2' G A2016 43.958 110.852 104.177 1.00 30.55 C
ATOM 12 O2' G A2016 43.135 110.972 103.041 1.00 29.03 O
ATOM 13 C1' G A2016 43.356 111.695 105.302 1.00 32.12 C
ATOM 14 N9 G A2016 44.362 112.278 106.191 1.00 34.71 N
ATOM 15 C8 G A2016 44.905 111.700 107.313 1.00 34.65 C
ATOM 16 N7 G A2016 45.801 112.449 107.894 1.00 35.21 N
ATOM 17 C5 G A2016 45.859 113.594 107.110 1.00 34.40 C
ATOM 18 C6 G A2016 46.666 114.751 107.236 1.00 35.08 C
ATOM 19 O6 G A2016 47.531 115.002 108.089 1.00 36.76 O
ATOM 20 N1 G A2016 46.397 115.672 106.232 1.00 34.21 N
ATOM 21 C2 G A2016 45.478 115.502 105.233 1.00 33.60 C
ATOM 22 N2 G A2016 45.354 116.517 104.371 1.00 34.54 N
ATOM 23 N3 G A2016 44.732 114.424 105.093 1.00 33.57 N
ATOM 24 C4 G A2016 44.971 113.515 106.062 1.00 34.14 C
ATOM 25 P C A2017 45.245 107.481 103.664 1.00 35.09 P
ATOM 26 OP1 C A2017 44.869 106.382 102.750 1.00 34.21 O
ATOM 27 OP2 C A2017 45.749 107.160 105.027 1.00 33.85 O
ATOM 28 O5' C A2017 46.307 108.398 102.910 1.00 34.95 O
TER
ATOM 1 O3' G B2014 43.577 111.714 115.173 1.00 32.73 O
ATOM 2 P U B2015 44.638 111.080 114.150 1.00 35.23 P
ATOM 3 OP1 U B2015 45.052 109.775 114.713 1.00 36.54 O
ATOM 4 OP2 U B2015 45.670 112.108 113.842 1.00 35.68 O
ATOM 5 O5' U B2015 43.811 110.819 112.810 1.00 35.61 O
ATOM 6 C5' U B2015 42.591 110.051 112.797 1.00 32.69 C
ATOM 7 C4' U B2015 41.785 110.384 111.561 1.00 32.52 C
ATOM 8 O4' U B2015 41.508 111.811 111.538 1.00 33.24 O
ATOM 9 C3' U B2015 42.497 110.139 110.248 1.00 33.18 C
ATOM 10 O3' U B2015 42.386 108.780 109.860 1.00 34.73 O
ATOM 11 C2' U B2015 41.773 111.083 109.301 1.00 33.04 C
ATOM 12 O2' U B2015 40.526 110.564 108.908 1.00 33.70 O
ATOM 13 C1' U B2015 41.544 112.294 110.206 1.00 33.62 C
ATOM 14 N1 U B2015 42.599 113.319 110.109 1.00 36.97 N
ATOM 15 C2 U B2015 42.588 114.177 109.008 1.00 38.55 C
ATOM 16 O2 U B2015 41.739 114.133 108.138 1.00 41.34 O
ATOM 17 N3 U B2015 43.616 115.086 108.968 1.00 36.93 N
ATOM 18 C4 U B2015 44.631 115.227 109.886 1.00 37.73 C
ATOM 19 O4 U B2015 45.498 116.080 109.701 1.00 37.58 O
ATOM 20 C5 U B2015 44.571 114.321 110.991 1.00 38.42 C
ATOM 21 C6 U B2015 43.583 113.426 111.066 1.00 37.48 C
ATOM 22 P G B2016 43.594 108.075 109.071 1.00 35.35 P
ATOM 23 OP1 G B2016 43.253 106.637 108.939 1.00 35.60 O
ATOM 24 OP2 G B2016 44.875 108.463 109.717 1.00 33.36 O
ATOM 25 O5' G B2016 43.563 108.758 107.633 1.00 33.49 O
TER
ATOM 2 P G A2016 43.594 108.075 109.071 1.00 35.35 P
ATOM 3 OP1 G A2016 43.253 106.637 108.939 1.00 35.60 O
ATOM 4 OP2 G A2016 44.875 108.463 109.717 1.00 33.36 O
ATOM 5 O5' G A2016 43.563 108.758 107.633 1.00 33.49 O
ATOM 6 C5' G A2016 42.506 108.511 106.700 1.00 29.80 C
ATOM 7 C4' G A2016 42.609 109.480 105.549 1.00 31.42 C
ATOM 8 O4' G A2016 42.521 110.837 106.064 1.00 31.88 O
ATOM 9 C3' G A2016 43.925 109.461 104.793 1.00 31.13 C
ATOM 10 O3' G A2016 43.946 108.424 103.813 1.00 33.39 O
ATOM 11 C2' G A2016 43.958 110.852 104.177 1.00 30.55 C
ATOM 12 O2' G A2016 43.135 110.972 103.041 1.00 29.03 O
ATOM 13 C1' G A2016 43.356 111.695 105.302 1.00 32.12 C
ATOM 14 N9 G A2016 44.362 112.278 106.191 1.00 34.71 N
ATOM 15 C8 G A2016 44.905 111.700 107.313 1.00 34.65 C
ATOM 16 N7 G A2016 45.801 112.449 107.894 1.00 35.21 N
ATOM 17 C5 G A2016 45.859 113.594 107.110 1.00 34.40 C
ATOM 18 C6 G A2016 46.666 114.751 107.236 1.00 35.08 C
ATOM 19 O6 G A2016 47.531 115.002 108.089 1.00 36.76 O
ATOM 20 N1 G A2016 46.397 115.672 106.232 1.00 34.21 N
ATOM 21 C2 G A2016 45.478 115.502 105.233 1.00 33.60 C
ATOM 22 N2 G A2016 45.354 116.517 104.371 1.00 34.54 N
ATOM 23 N3 G A2016 44.732 114.424 105.093 1.00 33.57 N
ATOM 24 C4 G A2016 44.971 113.515 106.062 1.00 34.14 C
ATOM 25 P C A2017 45.245 107.481 103.664 1.00 35.09 P
ATOM 26 OP1 C A2017 44.869 106.382 102.750 1.00 34.21 O
ATOM 27 OP2 C A2017 45.749 107.160 105.027 1.00 33.85 O
ATOM 28 O5' C A2017 46.307 108.398 102.910 1.00 34.95 O
TER
ATOM 1 O3' G B2014 43.577 111.714 115.173 1.00 32.73 O
ATOM 2 P U B2015 44.638 111.080 114.150 1.00 35.23 P
ATOM 3 OP1 U B2015 45.052 109.775 114.713 1.00 36.54 O
ATOM 4 OP2 U B2015 45.670 112.108 113.842 1.00 35.68 O
ATOM 5 O5' U B2015 43.811 110.819 112.810 1.00 35.61 O
ATOM 6 C5' U B2015 42.591 110.051 112.797 1.00 32.69 C
ATOM 7 C4' U B2015 41.785 110.384 111.561 1.00 32.52 C
ATOM 8 O4' U B2015 41.508 111.811 111.538 1.00 33.24 O
ATOM 9 C3' U B2015 42.497 110.139 110.248 1.00 33.18 C
ATOM 10 O3' U B2015 42.386 108.780 109.860 1.00 34.73 O
ATOM 11 C2' U B2015 41.773 111.083 109.301 1.00 33.04 C
ATOM 12 O2' U B2015 40.526 110.564 108.908 1.00 33.70 O
ATOM 13 C1' U B2015 41.544 112.294 110.206 1.00 33.62 C
ATOM 14 N1 U B2015 42.599 113.319 110.109 1.00 36.97 N
ATOM 15 C2 U B2015 42.588 114.177 109.008 1.00 38.55 C
ATOM 16 O2 U B2015 41.739 114.133 108.138 1.00 41.34 O
ATOM 17 N3 U B2015 43.616 115.086 108.968 1.00 36.93 N
ATOM 18 C4 U B2015 44.631 115.227 109.886 1.00 37.73 C
ATOM 19 O4 U B2015 45.498 116.080 109.701 1.00 37.58 O
ATOM 20 C5 U B2015 44.571 114.321 110.991 1.00 38.42 C
ATOM 21 C6 U B2015 43.583 113.426 111.066 1.00 37.48 C
ATOM 22 P G B2016 43.594 108.075 109.071 1.00 35.35 P
ATOM 23 OP1 G B2016 43.253 106.637 108.939 1.00 35.60 O
ATOM 24 OP2 G B2016 44.875 108.463 109.717 1.00 33.36 O
ATOM 25 O5' G B2016 43.563 108.758 107.633 1.00 33.49 O
TER
Atoms:
OP1: (43.253,106.637,108.939)
OP2: (44.875,108.463,109.717)
C3': (43.925,109.461,104.793)
C1': (43.356,111.695,105.302)
C5': (42.506,108.511,106.700)
O6: (47.531,115.002,108.089)
O4': (42.521,110.837,106.064)
C8: (44.905,111.700,107.313)
C2: (45.478,115.502,105.233)
C6: (46.666,114.751,107.236)
C5: (45.859,113.594,107.110)
C4: (44.971,113.515,106.062)
P: (43.594,108.075,109.071)
C4': (42.609,109.480,105.549)
C2': (43.958,110.852,104.177)
O2': (43.135,110.972,103.041)
N1: (46.397,115.672,106.232)
N2: (45.354,116.517,104.371)
N3: (44.732,114.424,105.093)
N7: (45.801,112.449,107.894)
N9: (44.362,112.278,106.191)
O5': (43.563,108.758,107.633)
O3': (43.946,108.424,103.813)
OP2: (44.875,108.463,109.717)
C3': (43.925,109.461,104.793)
C1': (43.356,111.695,105.302)
C5': (42.506,108.511,106.700)
O6: (47.531,115.002,108.089)
O4': (42.521,110.837,106.064)
C8: (44.905,111.700,107.313)
C2: (45.478,115.502,105.233)
C6: (46.666,114.751,107.236)
C5: (45.859,113.594,107.110)
C4: (44.971,113.515,106.062)
P: (43.594,108.075,109.071)
C4': (42.609,109.480,105.549)
C2': (43.958,110.852,104.177)
O2': (43.135,110.972,103.041)
N1: (46.397,115.672,106.232)
N2: (45.354,116.517,104.371)
N3: (44.732,114.424,105.093)
N7: (45.801,112.449,107.894)
N9: (44.362,112.278,106.191)
O5': (43.563,108.758,107.633)
O3': (43.946,108.424,103.813)
C4: (44.631,115.227,109.886)
N3: (43.616,115.086,108.968)
OP1: (45.052,109.775,114.713)
OP2: (45.670,112.108,113.842)
C2: (42.588,114.177,109.008)
C1': (41.544,112.294,110.206)
C3': (42.497,110.139,110.248)
O5': (43.811,110.819,112.810)
O4': (41.508,111.811,111.538)
C5': (42.591,110.051,112.797)
P: (44.638,111.080,114.150)
C4': (41.785,110.384,111.561)
C2': (41.773,111.083,109.301)
O2': (40.526,110.564,108.908)
N1: (42.599,113.319,110.109)
O4: (45.498,116.080,109.701)
O2: (41.739,114.133,108.138)
C6: (43.583,113.426,111.066)
C5: (44.571,114.321,110.991)
O3': (42.386,108.780,109.860)
N3: (43.616,115.086,108.968)
OP1: (45.052,109.775,114.713)
OP2: (45.670,112.108,113.842)
C2: (42.588,114.177,109.008)
C1': (41.544,112.294,110.206)
C3': (42.497,110.139,110.248)
O5': (43.811,110.819,112.810)
O4': (41.508,111.811,111.538)
C5': (42.591,110.051,112.797)
P: (44.638,111.080,114.150)
C4': (41.785,110.384,111.561)
C2': (41.773,111.083,109.301)
O2': (40.526,110.564,108.908)
N1: (42.599,113.319,110.109)
O4: (45.498,116.080,109.701)
O2: (41.739,114.133,108.138)
C6: (43.583,113.426,111.066)
C5: (44.571,114.321,110.991)
O3': (42.386,108.780,109.860)
Image (generated by PyMOL):