Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12649:12648
Extra
PDB:
ATOM 1 O3' A A2648 3.980 16.775 9.861 1.00 50.19 O
ATOM 2 P A A2649 2.513 16.994 9.166 1.00 47.25 P
ATOM 3 OP1 A A2649 2.302 15.872 8.221 1.00 47.48 O
ATOM 4 OP2 A A2649 2.483 18.373 8.621 1.00 47.68 O
ATOM 5 O5' A A2649 1.504 16.872 10.405 1.00 47.00 O
ATOM 6 C5' A A2649 0.774 15.681 10.626 1.00 46.91 C
ATOM 7 C4' A A2649 -0.004 15.708 11.920 1.00 46.63 C
ATOM 8 O4' A A2649 0.746 16.378 12.944 1.00 46.19 O
ATOM 9 C3' A A2649 -1.333 16.460 11.923 1.00 47.07 C
ATOM 10 O3' A A2649 -2.370 15.753 11.269 1.00 47.46 O
ATOM 11 C2' A A2649 -1.579 16.661 13.423 1.00 46.63 C
ATOM 12 O2' A A2649 -2.218 15.527 14.019 1.00 46.41 O
ATOM 13 C1' A A2649 -0.139 16.777 13.965 1.00 46.10 C
ATOM 14 N9 A A2649 0.170 18.141 14.347 1.00 46.12 N
ATOM 15 C8 A A2649 0.933 19.050 13.717 1.00 46.31 C
ATOM 16 N7 A A2649 0.928 20.201 14.351 1.00 46.29 N
ATOM 17 C5 A A2649 0.088 20.004 15.443 1.00 46.08 C
ATOM 18 C6 A A2649 -0.299 20.823 16.522 1.00 45.96 C
ATOM 19 N6 A A2649 0.112 22.083 16.653 1.00 46.06 N
ATOM 20 N1 A A2649 -1.104 20.295 17.476 1.00 45.75 N
ATOM 21 C2 A A2649 -1.501 19.017 17.329 1.00 45.67 C
ATOM 22 N3 A A2649 -1.196 18.139 16.358 1.00 45.77 N
ATOM 23 C4 A A2649 -0.383 18.718 15.444 1.00 45.97 C
ATOM 24 P G A2650 -3.533 16.524 10.502 1.00 59.83 P
ATOM 25 OP1 G A2650 -3.336 16.306 9.071 1.00 60.28 O
ATOM 26 OP2 G A2650 -3.547 17.901 11.003 1.00 59.87 O
ATOM 27 O5' G A2650 -4.831 15.718 10.992 1.00 59.86 O
TER
ATOM 1 O3' G B2647 8.597 20.681 9.456 1.00 48.99 O
ATOM 2 P A B2648 7.042 20.642 9.039 1.00 50.46 P
ATOM 3 OP1 A B2648 6.984 20.737 7.525 1.00 51.06 O
ATOM 4 OP2 A B2648 6.333 21.691 9.858 1.00 50.50 O
ATOM 5 O5' A B2648 6.611 19.174 9.509 1.00 50.12 O
ATOM 6 C5' A B2648 6.458 18.924 10.866 1.00 49.62 C
ATOM 7 C4' A B2648 5.875 17.600 11.171 1.00 49.42 C
ATOM 8 O4' A B2648 6.141 17.374 12.566 1.00 48.83 O
ATOM 9 C3' A B2648 4.368 17.513 11.018 1.00 49.79 C
ATOM 10 O3' A B2648 3.980 16.775 9.861 1.00 50.19 O
ATOM 11 C2' A B2648 3.891 16.889 12.319 1.00 49.33 C
ATOM 12 O2' A B2648 3.914 15.487 12.207 1.00 49.15 O
ATOM 13 C1' A B2648 4.976 17.267 13.288 1.00 48.81 C
ATOM 14 N9 A B2648 4.747 18.537 13.980 1.00 48.83 N
ATOM 15 C8 A B2648 5.265 19.771 13.755 1.00 49.00 C
ATOM 16 N7 A B2648 4.887 20.689 14.599 1.00 48.96 N
ATOM 17 C5 A B2648 4.092 19.983 15.469 1.00 48.71 C
ATOM 18 C6 A B2648 3.359 20.352 16.610 1.00 48.57 C
ATOM 19 N6 A B2648 3.363 21.585 17.078 1.00 48.64 N
ATOM 20 N1 A B2648 2.632 19.429 17.275 1.00 48.35 N
ATOM 21 C2 A B2648 2.669 18.184 16.789 1.00 48.29 C
ATOM 22 N3 A B2648 3.326 17.680 15.723 1.00 48.41 N
ATOM 23 C4 A B2648 4.021 18.657 15.107 1.00 48.62 C
ATOM 24 P A B2649 2.513 16.994 9.166 1.00 47.25 P
ATOM 25 OP1 A B2649 2.302 15.872 8.221 1.00 47.48 O
ATOM 26 OP2 A B2649 2.483 18.373 8.621 1.00 47.68 O
ATOM 27 O5' A B2649 1.504 16.872 10.405 1.00 47.00 O
TER
ATOM 2 P A A2649 2.513 16.994 9.166 1.00 47.25 P
ATOM 3 OP1 A A2649 2.302 15.872 8.221 1.00 47.48 O
ATOM 4 OP2 A A2649 2.483 18.373 8.621 1.00 47.68 O
ATOM 5 O5' A A2649 1.504 16.872 10.405 1.00 47.00 O
ATOM 6 C5' A A2649 0.774 15.681 10.626 1.00 46.91 C
ATOM 7 C4' A A2649 -0.004 15.708 11.920 1.00 46.63 C
ATOM 8 O4' A A2649 0.746 16.378 12.944 1.00 46.19 O
ATOM 9 C3' A A2649 -1.333 16.460 11.923 1.00 47.07 C
ATOM 10 O3' A A2649 -2.370 15.753 11.269 1.00 47.46 O
ATOM 11 C2' A A2649 -1.579 16.661 13.423 1.00 46.63 C
ATOM 12 O2' A A2649 -2.218 15.527 14.019 1.00 46.41 O
ATOM 13 C1' A A2649 -0.139 16.777 13.965 1.00 46.10 C
ATOM 14 N9 A A2649 0.170 18.141 14.347 1.00 46.12 N
ATOM 15 C8 A A2649 0.933 19.050 13.717 1.00 46.31 C
ATOM 16 N7 A A2649 0.928 20.201 14.351 1.00 46.29 N
ATOM 17 C5 A A2649 0.088 20.004 15.443 1.00 46.08 C
ATOM 18 C6 A A2649 -0.299 20.823 16.522 1.00 45.96 C
ATOM 19 N6 A A2649 0.112 22.083 16.653 1.00 46.06 N
ATOM 20 N1 A A2649 -1.104 20.295 17.476 1.00 45.75 N
ATOM 21 C2 A A2649 -1.501 19.017 17.329 1.00 45.67 C
ATOM 22 N3 A A2649 -1.196 18.139 16.358 1.00 45.77 N
ATOM 23 C4 A A2649 -0.383 18.718 15.444 1.00 45.97 C
ATOM 24 P G A2650 -3.533 16.524 10.502 1.00 59.83 P
ATOM 25 OP1 G A2650 -3.336 16.306 9.071 1.00 60.28 O
ATOM 26 OP2 G A2650 -3.547 17.901 11.003 1.00 59.87 O
ATOM 27 O5' G A2650 -4.831 15.718 10.992 1.00 59.86 O
TER
ATOM 1 O3' G B2647 8.597 20.681 9.456 1.00 48.99 O
ATOM 2 P A B2648 7.042 20.642 9.039 1.00 50.46 P
ATOM 3 OP1 A B2648 6.984 20.737 7.525 1.00 51.06 O
ATOM 4 OP2 A B2648 6.333 21.691 9.858 1.00 50.50 O
ATOM 5 O5' A B2648 6.611 19.174 9.509 1.00 50.12 O
ATOM 6 C5' A B2648 6.458 18.924 10.866 1.00 49.62 C
ATOM 7 C4' A B2648 5.875 17.600 11.171 1.00 49.42 C
ATOM 8 O4' A B2648 6.141 17.374 12.566 1.00 48.83 O
ATOM 9 C3' A B2648 4.368 17.513 11.018 1.00 49.79 C
ATOM 10 O3' A B2648 3.980 16.775 9.861 1.00 50.19 O
ATOM 11 C2' A B2648 3.891 16.889 12.319 1.00 49.33 C
ATOM 12 O2' A B2648 3.914 15.487 12.207 1.00 49.15 O
ATOM 13 C1' A B2648 4.976 17.267 13.288 1.00 48.81 C
ATOM 14 N9 A B2648 4.747 18.537 13.980 1.00 48.83 N
ATOM 15 C8 A B2648 5.265 19.771 13.755 1.00 49.00 C
ATOM 16 N7 A B2648 4.887 20.689 14.599 1.00 48.96 N
ATOM 17 C5 A B2648 4.092 19.983 15.469 1.00 48.71 C
ATOM 18 C6 A B2648 3.359 20.352 16.610 1.00 48.57 C
ATOM 19 N6 A B2648 3.363 21.585 17.078 1.00 48.64 N
ATOM 20 N1 A B2648 2.632 19.429 17.275 1.00 48.35 N
ATOM 21 C2 A B2648 2.669 18.184 16.789 1.00 48.29 C
ATOM 22 N3 A B2648 3.326 17.680 15.723 1.00 48.41 N
ATOM 23 C4 A B2648 4.021 18.657 15.107 1.00 48.62 C
ATOM 24 P A B2649 2.513 16.994 9.166 1.00 47.25 P
ATOM 25 OP1 A B2649 2.302 15.872 8.221 1.00 47.48 O
ATOM 26 OP2 A B2649 2.483 18.373 8.621 1.00 47.68 O
ATOM 27 O5' A B2649 1.504 16.872 10.405 1.00 47.00 O
TER
Atoms:
OP1: (2.302,15.872,8.221)
OP2: (2.483,18.373,8.621)
C3': (-1.333,16.460,11.923)
C1': (-0.139,16.777,13.965)
C5': (0.774,15.681,10.626)
O4': (0.746,16.378,12.944)
C8: (0.933,19.050,13.717)
O2': (-2.218,15.527,14.019)
C6: (-0.299,20.823,16.522)
C5: (0.088,20.004,15.443)
C4: (-0.383,18.718,15.444)
P: (2.513,16.994,9.166)
C4': (-0.004,15.708,11.920)
C2': (-1.579,16.661,13.423)
C2: (-1.501,19.017,17.329)
N1: (-1.104,20.295,17.476)
N3: (-1.196,18.139,16.358)
N6: (0.112,22.083,16.653)
N7: (0.928,20.201,14.351)
N9: (0.170,18.141,14.347)
O5': (1.504,16.872,10.405)
O3': (-2.370,15.753,11.269)
OP2: (2.483,18.373,8.621)
C3': (-1.333,16.460,11.923)
C1': (-0.139,16.777,13.965)
C5': (0.774,15.681,10.626)
O4': (0.746,16.378,12.944)
C8: (0.933,19.050,13.717)
O2': (-2.218,15.527,14.019)
C6: (-0.299,20.823,16.522)
C5: (0.088,20.004,15.443)
C4: (-0.383,18.718,15.444)
P: (2.513,16.994,9.166)
C4': (-0.004,15.708,11.920)
C2': (-1.579,16.661,13.423)
C2: (-1.501,19.017,17.329)
N1: (-1.104,20.295,17.476)
N3: (-1.196,18.139,16.358)
N6: (0.112,22.083,16.653)
N7: (0.928,20.201,14.351)
N9: (0.170,18.141,14.347)
O5': (1.504,16.872,10.405)
O3': (-2.370,15.753,11.269)
OP1: (6.984,20.737,7.525)
OP2: (6.333,21.691,9.858)
C3': (4.368,17.513,11.018)
C1': (4.976,17.267,13.288)
C5': (6.458,18.924,10.866)
O4': (6.141,17.374,12.566)
C8: (5.265,19.771,13.755)
O2': (3.914,15.487,12.207)
C6: (3.359,20.352,16.610)
C5: (4.092,19.983,15.469)
C4: (4.021,18.657,15.107)
P: (7.042,20.642,9.039)
C4': (5.875,17.600,11.171)
C2': (3.891,16.889,12.319)
C2: (2.669,18.184,16.789)
N1: (2.632,19.429,17.275)
N3: (3.326,17.680,15.723)
N6: (3.363,21.585,17.078)
N7: (4.887,20.689,14.599)
N9: (4.747,18.537,13.980)
O5': (6.611,19.174,9.509)
O3': (3.980,16.775,9.861)
OP2: (6.333,21.691,9.858)
C3': (4.368,17.513,11.018)
C1': (4.976,17.267,13.288)
C5': (6.458,18.924,10.866)
O4': (6.141,17.374,12.566)
C8: (5.265,19.771,13.755)
O2': (3.914,15.487,12.207)
C6: (3.359,20.352,16.610)
C5: (4.092,19.983,15.469)
C4: (4.021,18.657,15.107)
P: (7.042,20.642,9.039)
C4': (5.875,17.600,11.171)
C2': (3.891,16.889,12.319)
C2: (2.669,18.184,16.789)
N1: (2.632,19.429,17.275)
N3: (3.326,17.680,15.723)
N6: (3.363,21.585,17.078)
N7: (4.887,20.689,14.599)
N9: (4.747,18.537,13.980)
O5': (6.611,19.174,9.509)
O3': (3.980,16.775,9.861)
Image (generated by PyMOL):