Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XGJ:D3:D2
Extra
PDB:
ATOM 1 O3' A A 2 33.249 -38.860 -24.114 1.00 64.18 O
ATOM 2 P A A 3 31.780 -39.101 -23.513 1.00 60.03 P
ATOM 3 OP1 A A 3 31.577 -38.107 -22.430 1.00 66.11 O
ATOM 4 OP2 A A 3 31.601 -40.539 -23.204 1.00 71.31 O
ATOM 5 O5' A A 3 30.842 -38.747 -24.757 1.00 64.98 O
ATOM 6 C5' A A 3 30.798 -37.439 -25.271 1.00 61.04 C
ATOM 7 C4' A A 3 30.084 -37.376 -26.607 1.00 61.38 C
ATOM 8 O4' A A 3 30.689 -38.330 -27.513 1.00 77.89 O
ATOM 9 C3' A A 3 28.608 -37.734 -26.578 1.00 65.56 C
ATOM 10 O3' A A 3 27.819 -36.598 -26.203 1.00 69.74 O
ATOM 11 C2' A A 3 28.397 -38.228 -28.005 1.00 68.83 C
ATOM 12 O2' A A 3 28.281 -37.195 -28.955 1.00 69.21 O
ATOM 13 C1' A A 3 29.692 -39.011 -28.248 1.00 75.68 C
ATOM 14 N9 A A 3 29.641 -40.432 -27.844 1.00 70.66 N
ATOM 15 C8 A A 3 30.273 -41.027 -26.782 1.00 68.77 C
ATOM 16 N7 A A 3 30.028 -42.309 -26.672 1.00 71.26 N
ATOM 17 C5 A A 3 29.178 -42.603 -27.730 1.00 82.63 C
ATOM 18 C6 A A 3 28.552 -43.801 -28.171 1.00 82.82 C
ATOM 19 N6 A A 3 28.686 -44.998 -27.575 1.00 80.64 N
ATOM 20 N1 A A 3 27.767 -43.715 -29.270 1.00 72.98 N
ATOM 21 C2 A A 3 27.615 -42.534 -29.885 1.00 79.49 C
ATOM 22 N3 A A 3 28.153 -41.357 -29.559 1.00 84.58 N
ATOM 23 C4 A A 3 28.932 -41.453 -28.465 1.00 78.85 C
ATOM 24 P A A 4 26.621 -36.716 -25.136 1.00 55.72 P
ATOM 25 OP1 A A 4 27.112 -37.441 -23.934 1.00 59.55 O
ATOM 26 OP2 A A 4 25.966 -35.390 -25.000 1.00 59.17 O
ATOM 27 O5' A A 4 25.584 -37.641 -25.910 1.00 61.63 O
TER
ATOM 1 O3' A B 1 37.404 -43.118 -23.619 1.00 71.31 O
ATOM 2 P A B 2 35.985 -43.340 -22.906 1.00 52.46 P
ATOM 3 OP1 A B 2 36.127 -42.974 -21.478 1.00 56.22 O
ATOM 4 OP2 A B 2 35.446 -44.680 -23.250 1.00 53.65 O
ATOM 5 O5' A B 2 35.141 -42.207 -23.650 1.00 60.32 O
ATOM 6 C5' A B 2 35.642 -40.889 -23.566 1.00 59.95 C
ATOM 7 C4' A B 2 35.304 -39.995 -24.742 1.00 67.69 C
ATOM 8 O4' A B 2 35.814 -40.575 -25.964 1.00 68.74 O
ATOM 9 C3' A B 2 33.830 -39.785 -25.024 1.00 70.31 C
ATOM 10 O3' A B 2 33.249 -38.860 -24.114 1.00 64.18 O
ATOM 11 C2' A B 2 33.941 -39.283 -26.453 1.00 62.49 C
ATOM 12 O2' A B 2 34.506 -38.001 -26.578 1.00 71.55 O
ATOM 13 C1' A B 2 34.896 -40.337 -27.010 1.00 62.66 C
ATOM 14 N9 A B 2 34.217 -41.590 -27.397 1.00 68.29 N
ATOM 15 C8 A B 2 34.235 -42.791 -26.740 1.00 67.71 C
ATOM 16 N7 A B 2 33.521 -43.730 -27.313 1.00 64.92 N
ATOM 17 C5 A B 2 32.980 -43.127 -28.435 1.00 73.49 C
ATOM 18 C6 A B 2 32.123 -43.596 -29.465 1.00 78.80 C
ATOM 19 N6 A B 2 31.626 -44.845 -29.552 1.00 65.70 N
ATOM 20 N1 A B 2 31.796 -42.696 -30.421 1.00 79.63 N
ATOM 21 C2 A B 2 32.281 -41.446 -30.352 1.00 76.40 C
ATOM 22 N3 A B 2 33.083 -40.905 -29.438 1.00 67.69 N
ATOM 23 C4 A B 2 33.401 -41.805 -28.497 1.00 69.23 C
ATOM 24 P A B 3 31.780 -39.101 -23.513 1.00 60.03 P
ATOM 25 OP1 A B 3 31.577 -38.107 -22.430 1.00 66.11 O
ATOM 26 OP2 A B 3 31.601 -40.539 -23.204 1.00 71.31 O
ATOM 27 O5' A B 3 30.842 -38.747 -24.757 1.00 64.98 O
TER
ATOM 2 P A A 3 31.780 -39.101 -23.513 1.00 60.03 P
ATOM 3 OP1 A A 3 31.577 -38.107 -22.430 1.00 66.11 O
ATOM 4 OP2 A A 3 31.601 -40.539 -23.204 1.00 71.31 O
ATOM 5 O5' A A 3 30.842 -38.747 -24.757 1.00 64.98 O
ATOM 6 C5' A A 3 30.798 -37.439 -25.271 1.00 61.04 C
ATOM 7 C4' A A 3 30.084 -37.376 -26.607 1.00 61.38 C
ATOM 8 O4' A A 3 30.689 -38.330 -27.513 1.00 77.89 O
ATOM 9 C3' A A 3 28.608 -37.734 -26.578 1.00 65.56 C
ATOM 10 O3' A A 3 27.819 -36.598 -26.203 1.00 69.74 O
ATOM 11 C2' A A 3 28.397 -38.228 -28.005 1.00 68.83 C
ATOM 12 O2' A A 3 28.281 -37.195 -28.955 1.00 69.21 O
ATOM 13 C1' A A 3 29.692 -39.011 -28.248 1.00 75.68 C
ATOM 14 N9 A A 3 29.641 -40.432 -27.844 1.00 70.66 N
ATOM 15 C8 A A 3 30.273 -41.027 -26.782 1.00 68.77 C
ATOM 16 N7 A A 3 30.028 -42.309 -26.672 1.00 71.26 N
ATOM 17 C5 A A 3 29.178 -42.603 -27.730 1.00 82.63 C
ATOM 18 C6 A A 3 28.552 -43.801 -28.171 1.00 82.82 C
ATOM 19 N6 A A 3 28.686 -44.998 -27.575 1.00 80.64 N
ATOM 20 N1 A A 3 27.767 -43.715 -29.270 1.00 72.98 N
ATOM 21 C2 A A 3 27.615 -42.534 -29.885 1.00 79.49 C
ATOM 22 N3 A A 3 28.153 -41.357 -29.559 1.00 84.58 N
ATOM 23 C4 A A 3 28.932 -41.453 -28.465 1.00 78.85 C
ATOM 24 P A A 4 26.621 -36.716 -25.136 1.00 55.72 P
ATOM 25 OP1 A A 4 27.112 -37.441 -23.934 1.00 59.55 O
ATOM 26 OP2 A A 4 25.966 -35.390 -25.000 1.00 59.17 O
ATOM 27 O5' A A 4 25.584 -37.641 -25.910 1.00 61.63 O
TER
ATOM 1 O3' A B 1 37.404 -43.118 -23.619 1.00 71.31 O
ATOM 2 P A B 2 35.985 -43.340 -22.906 1.00 52.46 P
ATOM 3 OP1 A B 2 36.127 -42.974 -21.478 1.00 56.22 O
ATOM 4 OP2 A B 2 35.446 -44.680 -23.250 1.00 53.65 O
ATOM 5 O5' A B 2 35.141 -42.207 -23.650 1.00 60.32 O
ATOM 6 C5' A B 2 35.642 -40.889 -23.566 1.00 59.95 C
ATOM 7 C4' A B 2 35.304 -39.995 -24.742 1.00 67.69 C
ATOM 8 O4' A B 2 35.814 -40.575 -25.964 1.00 68.74 O
ATOM 9 C3' A B 2 33.830 -39.785 -25.024 1.00 70.31 C
ATOM 10 O3' A B 2 33.249 -38.860 -24.114 1.00 64.18 O
ATOM 11 C2' A B 2 33.941 -39.283 -26.453 1.00 62.49 C
ATOM 12 O2' A B 2 34.506 -38.001 -26.578 1.00 71.55 O
ATOM 13 C1' A B 2 34.896 -40.337 -27.010 1.00 62.66 C
ATOM 14 N9 A B 2 34.217 -41.590 -27.397 1.00 68.29 N
ATOM 15 C8 A B 2 34.235 -42.791 -26.740 1.00 67.71 C
ATOM 16 N7 A B 2 33.521 -43.730 -27.313 1.00 64.92 N
ATOM 17 C5 A B 2 32.980 -43.127 -28.435 1.00 73.49 C
ATOM 18 C6 A B 2 32.123 -43.596 -29.465 1.00 78.80 C
ATOM 19 N6 A B 2 31.626 -44.845 -29.552 1.00 65.70 N
ATOM 20 N1 A B 2 31.796 -42.696 -30.421 1.00 79.63 N
ATOM 21 C2 A B 2 32.281 -41.446 -30.352 1.00 76.40 C
ATOM 22 N3 A B 2 33.083 -40.905 -29.438 1.00 67.69 N
ATOM 23 C4 A B 2 33.401 -41.805 -28.497 1.00 69.23 C
ATOM 24 P A B 3 31.780 -39.101 -23.513 1.00 60.03 P
ATOM 25 OP1 A B 3 31.577 -38.107 -22.430 1.00 66.11 O
ATOM 26 OP2 A B 3 31.601 -40.539 -23.204 1.00 71.31 O
ATOM 27 O5' A B 3 30.842 -38.747 -24.757 1.00 64.98 O
TER
Atoms:
OP1: (31.577,-38.107,-22.430)
OP2: (31.601,-40.539,-23.204)
C3': (28.608,-37.734,-26.578)
C1': (29.692,-39.011,-28.248)
C5': (30.798,-37.439,-25.271)
O4': (30.689,-38.330,-27.513)
C8: (30.273,-41.027,-26.782)
O2': (28.281,-37.195,-28.955)
C6: (28.552,-43.801,-28.171)
C5: (29.178,-42.603,-27.730)
C4: (28.932,-41.453,-28.465)
P: (31.780,-39.101,-23.513)
C4': (30.084,-37.376,-26.607)
C2': (28.397,-38.228,-28.005)
C2: (27.615,-42.534,-29.885)
N1: (27.767,-43.715,-29.270)
N3: (28.153,-41.357,-29.559)
N6: (28.686,-44.998,-27.575)
N7: (30.028,-42.309,-26.672)
N9: (29.641,-40.432,-27.844)
O5': (30.842,-38.747,-24.757)
O3': (27.819,-36.598,-26.203)
OP2: (31.601,-40.539,-23.204)
C3': (28.608,-37.734,-26.578)
C1': (29.692,-39.011,-28.248)
C5': (30.798,-37.439,-25.271)
O4': (30.689,-38.330,-27.513)
C8: (30.273,-41.027,-26.782)
O2': (28.281,-37.195,-28.955)
C6: (28.552,-43.801,-28.171)
C5: (29.178,-42.603,-27.730)
C4: (28.932,-41.453,-28.465)
P: (31.780,-39.101,-23.513)
C4': (30.084,-37.376,-26.607)
C2': (28.397,-38.228,-28.005)
C2: (27.615,-42.534,-29.885)
N1: (27.767,-43.715,-29.270)
N3: (28.153,-41.357,-29.559)
N6: (28.686,-44.998,-27.575)
N7: (30.028,-42.309,-26.672)
N9: (29.641,-40.432,-27.844)
O5': (30.842,-38.747,-24.757)
O3': (27.819,-36.598,-26.203)
OP1: (36.127,-42.974,-21.478)
OP2: (35.446,-44.680,-23.250)
C3': (33.830,-39.785,-25.024)
C1': (34.896,-40.337,-27.010)
C5': (35.642,-40.889,-23.566)
O4': (35.814,-40.575,-25.964)
C8: (34.235,-42.791,-26.740)
O2': (34.506,-38.001,-26.578)
C6: (32.123,-43.596,-29.465)
C5: (32.980,-43.127,-28.435)
C4: (33.401,-41.805,-28.497)
P: (35.985,-43.340,-22.906)
C4': (35.304,-39.995,-24.742)
C2': (33.941,-39.283,-26.453)
C2: (32.281,-41.446,-30.352)
N1: (31.796,-42.696,-30.421)
N3: (33.083,-40.905,-29.438)
N6: (31.626,-44.845,-29.552)
N7: (33.521,-43.730,-27.313)
N9: (34.217,-41.590,-27.397)
O5': (35.141,-42.207,-23.650)
O3': (33.249,-38.860,-24.114)
OP2: (35.446,-44.680,-23.250)
C3': (33.830,-39.785,-25.024)
C1': (34.896,-40.337,-27.010)
C5': (35.642,-40.889,-23.566)
O4': (35.814,-40.575,-25.964)
C8: (34.235,-42.791,-26.740)
O2': (34.506,-38.001,-26.578)
C6: (32.123,-43.596,-29.465)
C5: (32.980,-43.127,-28.435)
C4: (33.401,-41.805,-28.497)
P: (35.985,-43.340,-22.906)
C4': (35.304,-39.995,-24.742)
C2': (33.941,-39.283,-26.453)
C2: (32.281,-41.446,-30.352)
N1: (31.796,-42.696,-30.421)
N3: (33.083,-40.905,-29.438)
N6: (31.626,-44.845,-29.552)
N7: (33.521,-43.730,-27.313)
N9: (34.217,-41.590,-27.397)
O5': (35.141,-42.207,-23.650)
O3': (33.249,-38.860,-24.114)
Image (generated by PyMOL):