Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1228:A1227
Extra
PDB:
ATOM 1 O3' U A1227 -25.112 148.193 218.634 1.00 6.57 O
ATOM 2 P G A1228 -23.940 149.289 218.664 1.00 0.01 P
ATOM 3 OP1 G A1228 -22.713 148.654 218.090 1.00 0.01 O
ATOM 4 OP2 G A1228 -23.877 149.831 220.026 1.00 0.01 O
ATOM 5 O5' G A1228 -24.483 150.392 217.671 1.00 0.01 O
ATOM 6 C5' G A1228 -24.133 150.346 216.306 1.00 0.01 C
ATOM 7 C4' G A1228 -24.641 151.549 215.578 1.00 0.01 C
ATOM 8 O4' G A1228 -26.049 151.713 215.845 1.00 0.01 O
ATOM 9 C3' G A1228 -24.016 152.878 215.972 1.00 0.01 C
ATOM 10 O3' G A1228 -22.785 153.117 215.302 1.00 0.01 O
ATOM 11 C2' G A1228 -25.098 153.865 215.587 1.00 0.01 C
ATOM 12 O2' G A1228 -25.051 154.128 214.184 1.00 0.01 O
ATOM 13 C1' G A1228 -26.369 153.073 215.900 1.00 0.01 C
ATOM 14 N9 G A1228 -26.891 153.343 217.239 1.00 0.04 N
ATOM 15 C8 G A1228 -26.538 152.613 218.319 1.00 0.04 C
ATOM 16 N7 G A1228 -27.152 153.012 219.394 1.00 0.04 N
ATOM 17 C5 G A1228 -27.986 154.037 219.001 1.00 0.04 C
ATOM 18 C6 G A1228 -28.888 154.829 219.760 1.00 0.04 C
ATOM 19 O6 G A1228 -29.141 154.756 220.988 1.00 0.04 O
ATOM 20 N1 G A1228 -29.512 155.772 218.948 1.00 0.04 N
ATOM 21 C2 G A1228 -29.286 155.910 217.602 1.00 0.04 C
ATOM 22 N2 G A1228 -29.955 156.863 216.933 1.00 0.04 N
ATOM 23 N3 G A1228 -28.449 155.166 216.913 1.00 0.04 N
ATOM 24 C4 G A1228 -27.841 154.244 217.659 1.00 0.04 C
ATOM 25 P G A1229 -21.411 153.192 216.121 1.00 14.28 P
ATOM 26 OP1 G A1229 -20.412 152.412 215.361 1.00 14.28 O
ATOM 27 OP2 G A1229 -21.699 152.798 217.502 1.00 14.28 O
ATOM 28 O5' G A1229 -21.056 154.741 216.066 1.00 14.28 O
TER
ATOM 1 O3' C B1226 -29.001 147.492 223.575 1.00 4.93 O
ATOM 2 P U B1227 -27.670 148.021 222.837 1.00 6.57 P
ATOM 3 OP1 U B1227 -26.577 147.067 223.179 1.00 6.57 O
ATOM 4 OP2 U B1227 -27.510 149.474 223.181 1.00 6.57 O
ATOM 5 O5' U B1227 -28.030 147.886 221.308 1.00 6.57 O
ATOM 6 C5' U B1227 -27.374 146.938 220.499 1.00 6.57 C
ATOM 7 C4' U B1227 -27.355 147.391 219.076 1.00 6.57 C
ATOM 8 O4' U B1227 -28.668 147.832 218.694 1.00 6.57 O
ATOM 9 C3' U B1227 -26.472 148.575 218.773 1.00 6.57 C
ATOM 10 O3' U B1227 -25.112 148.193 218.634 1.00 6.57 O
ATOM 11 C2' U B1227 -27.083 149.082 217.494 1.00 6.57 C
ATOM 12 O2' U B1227 -26.661 148.276 216.418 1.00 6.57 O
ATOM 13 C1' U B1227 -28.563 148.808 217.717 1.00 6.57 C
ATOM 14 N1 U B1227 -29.297 149.990 218.148 1.00 5.79 N
ATOM 15 C2 U B1227 -29.675 150.755 217.085 1.00 5.79 C
ATOM 16 O2 U B1227 -29.395 150.453 215.958 1.00 5.79 O
ATOM 17 N3 U B1227 -30.364 151.891 217.372 1.00 5.79 N
ATOM 18 C4 U B1227 -30.738 152.343 218.608 1.00 5.79 C
ATOM 19 O4 U B1227 -31.365 153.402 218.614 1.00 5.79 O
ATOM 20 C5 U B1227 -30.329 151.493 219.707 1.00 5.79 C
ATOM 21 C6 U B1227 -29.636 150.355 219.442 1.00 5.79 C
ATOM 22 P G B1228 -23.940 149.289 218.664 1.00 0.01 P
ATOM 23 OP1 G B1228 -22.713 148.654 218.090 1.00 0.01 O
ATOM 24 OP2 G B1228 -23.877 149.831 220.026 1.00 0.01 O
ATOM 25 O5' G B1228 -24.483 150.392 217.671 1.00 0.01 O
TER
ATOM 2 P G A1228 -23.940 149.289 218.664 1.00 0.01 P
ATOM 3 OP1 G A1228 -22.713 148.654 218.090 1.00 0.01 O
ATOM 4 OP2 G A1228 -23.877 149.831 220.026 1.00 0.01 O
ATOM 5 O5' G A1228 -24.483 150.392 217.671 1.00 0.01 O
ATOM 6 C5' G A1228 -24.133 150.346 216.306 1.00 0.01 C
ATOM 7 C4' G A1228 -24.641 151.549 215.578 1.00 0.01 C
ATOM 8 O4' G A1228 -26.049 151.713 215.845 1.00 0.01 O
ATOM 9 C3' G A1228 -24.016 152.878 215.972 1.00 0.01 C
ATOM 10 O3' G A1228 -22.785 153.117 215.302 1.00 0.01 O
ATOM 11 C2' G A1228 -25.098 153.865 215.587 1.00 0.01 C
ATOM 12 O2' G A1228 -25.051 154.128 214.184 1.00 0.01 O
ATOM 13 C1' G A1228 -26.369 153.073 215.900 1.00 0.01 C
ATOM 14 N9 G A1228 -26.891 153.343 217.239 1.00 0.04 N
ATOM 15 C8 G A1228 -26.538 152.613 218.319 1.00 0.04 C
ATOM 16 N7 G A1228 -27.152 153.012 219.394 1.00 0.04 N
ATOM 17 C5 G A1228 -27.986 154.037 219.001 1.00 0.04 C
ATOM 18 C6 G A1228 -28.888 154.829 219.760 1.00 0.04 C
ATOM 19 O6 G A1228 -29.141 154.756 220.988 1.00 0.04 O
ATOM 20 N1 G A1228 -29.512 155.772 218.948 1.00 0.04 N
ATOM 21 C2 G A1228 -29.286 155.910 217.602 1.00 0.04 C
ATOM 22 N2 G A1228 -29.955 156.863 216.933 1.00 0.04 N
ATOM 23 N3 G A1228 -28.449 155.166 216.913 1.00 0.04 N
ATOM 24 C4 G A1228 -27.841 154.244 217.659 1.00 0.04 C
ATOM 25 P G A1229 -21.411 153.192 216.121 1.00 14.28 P
ATOM 26 OP1 G A1229 -20.412 152.412 215.361 1.00 14.28 O
ATOM 27 OP2 G A1229 -21.699 152.798 217.502 1.00 14.28 O
ATOM 28 O5' G A1229 -21.056 154.741 216.066 1.00 14.28 O
TER
ATOM 1 O3' C B1226 -29.001 147.492 223.575 1.00 4.93 O
ATOM 2 P U B1227 -27.670 148.021 222.837 1.00 6.57 P
ATOM 3 OP1 U B1227 -26.577 147.067 223.179 1.00 6.57 O
ATOM 4 OP2 U B1227 -27.510 149.474 223.181 1.00 6.57 O
ATOM 5 O5' U B1227 -28.030 147.886 221.308 1.00 6.57 O
ATOM 6 C5' U B1227 -27.374 146.938 220.499 1.00 6.57 C
ATOM 7 C4' U B1227 -27.355 147.391 219.076 1.00 6.57 C
ATOM 8 O4' U B1227 -28.668 147.832 218.694 1.00 6.57 O
ATOM 9 C3' U B1227 -26.472 148.575 218.773 1.00 6.57 C
ATOM 10 O3' U B1227 -25.112 148.193 218.634 1.00 6.57 O
ATOM 11 C2' U B1227 -27.083 149.082 217.494 1.00 6.57 C
ATOM 12 O2' U B1227 -26.661 148.276 216.418 1.00 6.57 O
ATOM 13 C1' U B1227 -28.563 148.808 217.717 1.00 6.57 C
ATOM 14 N1 U B1227 -29.297 149.990 218.148 1.00 5.79 N
ATOM 15 C2 U B1227 -29.675 150.755 217.085 1.00 5.79 C
ATOM 16 O2 U B1227 -29.395 150.453 215.958 1.00 5.79 O
ATOM 17 N3 U B1227 -30.364 151.891 217.372 1.00 5.79 N
ATOM 18 C4 U B1227 -30.738 152.343 218.608 1.00 5.79 C
ATOM 19 O4 U B1227 -31.365 153.402 218.614 1.00 5.79 O
ATOM 20 C5 U B1227 -30.329 151.493 219.707 1.00 5.79 C
ATOM 21 C6 U B1227 -29.636 150.355 219.442 1.00 5.79 C
ATOM 22 P G B1228 -23.940 149.289 218.664 1.00 0.01 P
ATOM 23 OP1 G B1228 -22.713 148.654 218.090 1.00 0.01 O
ATOM 24 OP2 G B1228 -23.877 149.831 220.026 1.00 0.01 O
ATOM 25 O5' G B1228 -24.483 150.392 217.671 1.00 0.01 O
TER
Atoms:
OP1: (-22.713,148.654,218.090)
OP2: (-23.877,149.831,220.026)
C3': (-24.016,152.878,215.972)
C1': (-26.369,153.073,215.900)
C5': (-24.133,150.346,216.306)
O6: (-29.141,154.756,220.988)
O4': (-26.049,151.713,215.845)
C8: (-26.538,152.613,218.319)
C2: (-29.286,155.910,217.602)
C6: (-28.888,154.829,219.760)
C5: (-27.986,154.037,219.001)
C4: (-27.841,154.244,217.659)
P: (-23.940,149.289,218.664)
C4': (-24.641,151.549,215.578)
C2': (-25.098,153.865,215.587)
O2': (-25.051,154.128,214.184)
N1: (-29.512,155.772,218.948)
N2: (-29.955,156.863,216.933)
N3: (-28.449,155.166,216.913)
N7: (-27.152,153.012,219.394)
N9: (-26.891,153.343,217.239)
O5': (-24.483,150.392,217.671)
O3': (-22.785,153.117,215.302)
OP2: (-23.877,149.831,220.026)
C3': (-24.016,152.878,215.972)
C1': (-26.369,153.073,215.900)
C5': (-24.133,150.346,216.306)
O6: (-29.141,154.756,220.988)
O4': (-26.049,151.713,215.845)
C8: (-26.538,152.613,218.319)
C2: (-29.286,155.910,217.602)
C6: (-28.888,154.829,219.760)
C5: (-27.986,154.037,219.001)
C4: (-27.841,154.244,217.659)
P: (-23.940,149.289,218.664)
C4': (-24.641,151.549,215.578)
C2': (-25.098,153.865,215.587)
O2': (-25.051,154.128,214.184)
N1: (-29.512,155.772,218.948)
N2: (-29.955,156.863,216.933)
N3: (-28.449,155.166,216.913)
N7: (-27.152,153.012,219.394)
N9: (-26.891,153.343,217.239)
O5': (-24.483,150.392,217.671)
O3': (-22.785,153.117,215.302)
C4: (-30.738,152.343,218.608)
N3: (-30.364,151.891,217.372)
OP1: (-26.577,147.067,223.179)
OP2: (-27.510,149.474,223.181)
C2: (-29.675,150.755,217.085)
C1': (-28.563,148.808,217.717)
C3': (-26.472,148.575,218.773)
O5': (-28.030,147.886,221.308)
O4': (-28.668,147.832,218.694)
C5': (-27.374,146.938,220.499)
P: (-27.670,148.021,222.837)
C4': (-27.355,147.391,219.076)
C2': (-27.083,149.082,217.494)
O2': (-26.661,148.276,216.418)
N1: (-29.297,149.990,218.148)
O4: (-31.365,153.402,218.614)
O2: (-29.395,150.453,215.958)
C6: (-29.636,150.355,219.442)
C5: (-30.329,151.493,219.707)
O3': (-25.112,148.193,218.634)
N3: (-30.364,151.891,217.372)
OP1: (-26.577,147.067,223.179)
OP2: (-27.510,149.474,223.181)
C2: (-29.675,150.755,217.085)
C1': (-28.563,148.808,217.717)
C3': (-26.472,148.575,218.773)
O5': (-28.030,147.886,221.308)
O4': (-28.668,147.832,218.694)
C5': (-27.374,146.938,220.499)
P: (-27.670,148.021,222.837)
C4': (-27.355,147.391,219.076)
C2': (-27.083,149.082,217.494)
O2': (-26.661,148.276,216.418)
N1: (-29.297,149.990,218.148)
O4: (-31.365,153.402,218.614)
O2: (-29.395,150.453,215.958)
C6: (-29.636,150.355,219.442)
C5: (-30.329,151.493,219.707)
O3': (-25.112,148.193,218.634)
Image (generated by PyMOL):