Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:B2:B24
Extra
PDB:
ATOM 1 O3' U A 1 54.209 12.688 104.217 1.00120.49 O
ATOM 2 P A A 2 54.279 13.262 102.696 1.00114.38 P
ATOM 3 OP1 A A 2 52.837 13.300 102.354 1.00114.96 O
ATOM 4 OP2 A A 2 55.187 12.569 101.782 1.00114.79 O
ATOM 5 O5' A A 2 54.864 14.754 102.731 1.00108.61 O
ATOM 6 C5' A A 2 54.815 15.541 103.871 1.00 99.10 C
ATOM 7 C4' A A 2 56.086 16.463 104.079 1.00 91.75 C
ATOM 8 O4' A A 2 56.866 15.906 105.109 1.00 90.14 O
ATOM 9 C3' A A 2 57.079 16.771 102.995 1.00 87.20 C
ATOM 10 O3' A A 2 57.926 17.924 103.386 1.00 80.98 O
ATOM 11 C2' A A 2 57.868 15.446 103.076 1.00 87.33 C
ATOM 12 O2' A A 2 59.222 15.511 102.657 1.00 86.55 O
ATOM 13 C1' A A 2 57.914 15.165 104.574 1.00 89.07 C
ATOM 14 N9 A A 2 57.764 13.745 104.932 1.00 89.90 N
ATOM 15 C8 A A 2 57.477 12.725 104.069 1.00 89.63 C
ATOM 16 N7 A A 2 57.483 11.538 104.626 1.00 89.43 N
ATOM 17 C5 A A 2 57.773 11.790 105.958 1.00 89.97 C
ATOM 18 C6 A A 2 57.930 10.934 107.055 1.00 90.44 C
ATOM 19 N6 A A 2 57.829 9.605 106.954 1.00 92.47 N
ATOM 20 N1 A A 2 58.213 11.484 108.250 1.00 90.01 N
ATOM 21 C2 A A 2 58.336 12.815 108.329 1.00 89.51 C
ATOM 22 N3 A A 2 58.216 13.737 107.366 1.00 90.09 N
ATOM 23 C4 A A 2 57.938 13.149 106.175 1.00 90.05 C
ATOM 24 P G A 3 58.236 19.164 102.341 1.00 73.95 P
ATOM 25 OP1 G A 3 59.610 19.698 102.284 1.00 73.26 O
ATOM 26 OP2 G A 3 57.134 20.069 102.527 1.00 74.78 O
ATOM 27 O5' G A 3 58.111 18.512 100.914 1.00 71.64 O
TER
ATOM 1 O3' U B 23 61.155 0.749 99.284 1.00139.86 O
ATOM 2 P G B 24 61.718 2.240 99.229 1.00137.86 P
ATOM 3 OP1 G B 24 62.614 2.095 98.071 1.00138.26 O
ATOM 4 OP2 G B 24 62.186 2.801 100.498 1.00137.37 O
ATOM 5 O5' G B 24 60.463 3.137 98.869 1.00135.04 O
ATOM 6 C5' G B 24 59.876 3.110 97.531 1.00131.08 C
ATOM 7 C4' G B 24 58.614 3.927 97.535 1.00127.77 C
ATOM 8 O4' G B 24 57.820 3.789 98.717 1.00128.10 O
ATOM 9 C3' G B 24 58.887 5.398 97.530 1.00124.89 C
ATOM 10 O3' G B 24 59.229 5.957 96.282 1.00118.60 O
ATOM 11 C2' G B 24 57.618 6.027 97.962 1.00125.63 C
ATOM 12 O2' G B 24 56.674 6.051 96.874 1.00126.08 O
ATOM 13 C1' G B 24 57.271 5.055 99.056 1.00126.93 C
ATOM 14 N9 G B 24 57.742 5.457 100.386 1.00127.00 N
ATOM 15 C8 G B 24 58.565 4.758 101.231 1.00127.10 C
ATOM 16 N7 G B 24 58.871 5.410 102.336 1.00126.75 N
ATOM 17 C5 G B 24 58.191 6.617 102.202 1.00126.95 C
ATOM 18 C6 G B 24 58.106 7.784 103.051 1.00126.89 C
ATOM 19 O6 G B 24 58.656 7.992 104.114 1.00126.62 O
ATOM 20 N1 G B 24 57.229 8.754 102.523 1.00126.76 N
ATOM 21 C2 G B 24 56.557 8.646 101.349 1.00127.02 C
ATOM 22 N2 G B 24 55.717 9.662 101.073 1.00127.93 N
ATOM 23 N3 G B 24 56.670 7.608 100.525 1.00126.97 N
ATOM 24 C4 G B 24 57.456 6.632 101.023 1.00126.95 C
ATOM 25 P C B 25 60.414 6.934 96.339 1.00113.29 P
ATOM 26 OP1 C B 25 60.693 7.125 94.944 1.00112.84 O
ATOM 27 OP2 C B 25 61.334 6.253 97.247 1.00112.84 O
ATOM 28 O5' C B 25 60.127 8.359 96.979 1.00109.54 O
TER
ATOM 2 P A A 2 54.279 13.262 102.696 1.00114.38 P
ATOM 3 OP1 A A 2 52.837 13.300 102.354 1.00114.96 O
ATOM 4 OP2 A A 2 55.187 12.569 101.782 1.00114.79 O
ATOM 5 O5' A A 2 54.864 14.754 102.731 1.00108.61 O
ATOM 6 C5' A A 2 54.815 15.541 103.871 1.00 99.10 C
ATOM 7 C4' A A 2 56.086 16.463 104.079 1.00 91.75 C
ATOM 8 O4' A A 2 56.866 15.906 105.109 1.00 90.14 O
ATOM 9 C3' A A 2 57.079 16.771 102.995 1.00 87.20 C
ATOM 10 O3' A A 2 57.926 17.924 103.386 1.00 80.98 O
ATOM 11 C2' A A 2 57.868 15.446 103.076 1.00 87.33 C
ATOM 12 O2' A A 2 59.222 15.511 102.657 1.00 86.55 O
ATOM 13 C1' A A 2 57.914 15.165 104.574 1.00 89.07 C
ATOM 14 N9 A A 2 57.764 13.745 104.932 1.00 89.90 N
ATOM 15 C8 A A 2 57.477 12.725 104.069 1.00 89.63 C
ATOM 16 N7 A A 2 57.483 11.538 104.626 1.00 89.43 N
ATOM 17 C5 A A 2 57.773 11.790 105.958 1.00 89.97 C
ATOM 18 C6 A A 2 57.930 10.934 107.055 1.00 90.44 C
ATOM 19 N6 A A 2 57.829 9.605 106.954 1.00 92.47 N
ATOM 20 N1 A A 2 58.213 11.484 108.250 1.00 90.01 N
ATOM 21 C2 A A 2 58.336 12.815 108.329 1.00 89.51 C
ATOM 22 N3 A A 2 58.216 13.737 107.366 1.00 90.09 N
ATOM 23 C4 A A 2 57.938 13.149 106.175 1.00 90.05 C
ATOM 24 P G A 3 58.236 19.164 102.341 1.00 73.95 P
ATOM 25 OP1 G A 3 59.610 19.698 102.284 1.00 73.26 O
ATOM 26 OP2 G A 3 57.134 20.069 102.527 1.00 74.78 O
ATOM 27 O5' G A 3 58.111 18.512 100.914 1.00 71.64 O
TER
ATOM 1 O3' U B 23 61.155 0.749 99.284 1.00139.86 O
ATOM 2 P G B 24 61.718 2.240 99.229 1.00137.86 P
ATOM 3 OP1 G B 24 62.614 2.095 98.071 1.00138.26 O
ATOM 4 OP2 G B 24 62.186 2.801 100.498 1.00137.37 O
ATOM 5 O5' G B 24 60.463 3.137 98.869 1.00135.04 O
ATOM 6 C5' G B 24 59.876 3.110 97.531 1.00131.08 C
ATOM 7 C4' G B 24 58.614 3.927 97.535 1.00127.77 C
ATOM 8 O4' G B 24 57.820 3.789 98.717 1.00128.10 O
ATOM 9 C3' G B 24 58.887 5.398 97.530 1.00124.89 C
ATOM 10 O3' G B 24 59.229 5.957 96.282 1.00118.60 O
ATOM 11 C2' G B 24 57.618 6.027 97.962 1.00125.63 C
ATOM 12 O2' G B 24 56.674 6.051 96.874 1.00126.08 O
ATOM 13 C1' G B 24 57.271 5.055 99.056 1.00126.93 C
ATOM 14 N9 G B 24 57.742 5.457 100.386 1.00127.00 N
ATOM 15 C8 G B 24 58.565 4.758 101.231 1.00127.10 C
ATOM 16 N7 G B 24 58.871 5.410 102.336 1.00126.75 N
ATOM 17 C5 G B 24 58.191 6.617 102.202 1.00126.95 C
ATOM 18 C6 G B 24 58.106 7.784 103.051 1.00126.89 C
ATOM 19 O6 G B 24 58.656 7.992 104.114 1.00126.62 O
ATOM 20 N1 G B 24 57.229 8.754 102.523 1.00126.76 N
ATOM 21 C2 G B 24 56.557 8.646 101.349 1.00127.02 C
ATOM 22 N2 G B 24 55.717 9.662 101.073 1.00127.93 N
ATOM 23 N3 G B 24 56.670 7.608 100.525 1.00126.97 N
ATOM 24 C4 G B 24 57.456 6.632 101.023 1.00126.95 C
ATOM 25 P C B 25 60.414 6.934 96.339 1.00113.29 P
ATOM 26 OP1 C B 25 60.693 7.125 94.944 1.00112.84 O
ATOM 27 OP2 C B 25 61.334 6.253 97.247 1.00112.84 O
ATOM 28 O5' C B 25 60.127 8.359 96.979 1.00109.54 O
TER
Atoms:
OP1: (52.837,13.300,102.354)
OP2: (55.187,12.569,101.782)
C3': (57.079,16.771,102.995)
C1': (57.914,15.165,104.574)
C5': (54.815,15.541,103.871)
O4': (56.866,15.906,105.109)
C8: (57.477,12.725,104.069)
O2': (59.222,15.511,102.657)
C6: (57.930,10.934,107.055)
C5: (57.773,11.790,105.958)
C4: (57.938,13.149,106.175)
P: (54.279,13.262,102.696)
C4': (56.086,16.463,104.079)
C2': (57.868,15.446,103.076)
C2: (58.336,12.815,108.329)
N1: (58.213,11.484,108.250)
N3: (58.216,13.737,107.366)
N6: (57.829,9.605,106.954)
N7: (57.483,11.538,104.626)
N9: (57.764,13.745,104.932)
O5': (54.864,14.754,102.731)
O3': (57.926,17.924,103.386)
OP2: (55.187,12.569,101.782)
C3': (57.079,16.771,102.995)
C1': (57.914,15.165,104.574)
C5': (54.815,15.541,103.871)
O4': (56.866,15.906,105.109)
C8: (57.477,12.725,104.069)
O2': (59.222,15.511,102.657)
C6: (57.930,10.934,107.055)
C5: (57.773,11.790,105.958)
C4: (57.938,13.149,106.175)
P: (54.279,13.262,102.696)
C4': (56.086,16.463,104.079)
C2': (57.868,15.446,103.076)
C2: (58.336,12.815,108.329)
N1: (58.213,11.484,108.250)
N3: (58.216,13.737,107.366)
N6: (57.829,9.605,106.954)
N7: (57.483,11.538,104.626)
N9: (57.764,13.745,104.932)
O5': (54.864,14.754,102.731)
O3': (57.926,17.924,103.386)
OP1: (62.614,2.095,98.071)
OP2: (62.186,2.801,100.498)
C3': (58.887,5.398,97.530)
C1': (57.271,5.055,99.056)
C5': (59.876,3.110,97.531)
O6: (58.656,7.992,104.114)
O4': (57.820,3.789,98.717)
C8: (58.565,4.758,101.231)
C2: (56.557,8.646,101.349)
C6: (58.106,7.784,103.051)
C5: (58.191,6.617,102.202)
C4: (57.456,6.632,101.023)
P: (61.718,2.240,99.229)
C4': (58.614,3.927,97.535)
C2': (57.618,6.027,97.962)
O2': (56.674,6.051,96.874)
N1: (57.229,8.754,102.523)
N2: (55.717,9.662,101.073)
N3: (56.670,7.608,100.525)
N7: (58.871,5.410,102.336)
N9: (57.742,5.457,100.386)
O5': (60.463,3.137,98.869)
O3': (59.229,5.957,96.282)
OP2: (62.186,2.801,100.498)
C3': (58.887,5.398,97.530)
C1': (57.271,5.055,99.056)
C5': (59.876,3.110,97.531)
O6: (58.656,7.992,104.114)
O4': (57.820,3.789,98.717)
C8: (58.565,4.758,101.231)
C2: (56.557,8.646,101.349)
C6: (58.106,7.784,103.051)
C5: (58.191,6.617,102.202)
C4: (57.456,6.632,101.023)
P: (61.718,2.240,99.229)
C4': (58.614,3.927,97.535)
C2': (57.618,6.027,97.962)
O2': (56.674,6.051,96.874)
N1: (57.229,8.754,102.523)
N2: (55.717,9.662,101.073)
N3: (56.670,7.608,100.525)
N7: (58.871,5.410,102.336)
N9: (57.742,5.457,100.386)
O5': (60.463,3.137,98.869)
O3': (59.229,5.957,96.282)
Image (generated by PyMOL):