Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1219:A1218
Extra
PDB:
ATOM 1 O3' U A1218 64.459 -84.600 -6.009 1.00 43.63 O
ATOM 2 P G A1219 63.314 -84.787 -4.876 1.00 43.33 P
ATOM 3 OP1 G A1219 63.871 -85.744 -3.877 1.00 36.62 O
ATOM 4 OP2 G A1219 62.006 -85.108 -5.541 1.00 41.78 O
ATOM 5 O5' G A1219 63.200 -83.338 -4.212 1.00 44.30 O
ATOM 6 C5' G A1219 64.325 -82.696 -3.601 1.00 42.24 C
ATOM 7 C4' G A1219 64.303 -81.224 -3.925 1.00 38.82 C
ATOM 8 O4' G A1219 64.276 -81.156 -5.369 1.00 38.69 O
ATOM 9 C3' G A1219 63.087 -80.415 -3.455 1.00 36.03 C
ATOM 10 O3' G A1219 63.288 -79.803 -2.157 1.00 30.19 O
ATOM 11 C2' G A1219 62.986 -79.334 -4.530 1.00 37.94 C
ATOM 12 O2' G A1219 63.821 -78.223 -4.301 1.00 39.56 O
ATOM 13 C1' G A1219 63.523 -80.042 -5.771 1.00 37.84 C
ATOM 14 N9 G A1219 62.506 -80.468 -6.725 1.00 38.46 N
ATOM 15 C8 G A1219 61.769 -81.627 -6.714 1.00 44.80 C
ATOM 16 N7 G A1219 60.933 -81.708 -7.715 1.00 45.74 N
ATOM 17 C5 G A1219 61.136 -80.534 -8.431 1.00 43.72 C
ATOM 18 C6 G A1219 60.518 -80.049 -9.631 1.00 47.45 C
ATOM 19 O6 G A1219 59.623 -80.573 -10.322 1.00 50.66 O
ATOM 20 N1 G A1219 61.040 -78.816 -10.008 1.00 45.35 N
ATOM 21 C2 G A1219 62.005 -78.124 -9.321 1.00 44.28 C
ATOM 22 N2 G A1219 62.355 -76.928 -9.825 1.00 42.49 N
ATOM 23 N3 G A1219 62.580 -78.560 -8.216 1.00 46.37 N
ATOM 24 C4 G A1219 62.104 -79.762 -7.831 1.00 40.41 C
ATOM 25 P A A1220 62.137 -79.854 -0.996 1.00 34.57 P
ATOM 26 OP1 A A1220 61.447 -78.551 -0.813 1.00 24.77 O
ATOM 27 OP2 A A1220 62.786 -80.491 0.183 1.00 40.22 O
ATOM 28 O5' A A1220 61.052 -80.927 -1.482 1.00 31.78 O
TER
ATOM 1 O3' A B1217 61.533 -87.431 -10.883 1.00 23.89 O
ATOM 2 P U B1218 61.319 -86.838 -9.408 1.00 35.08 P
ATOM 3 OP1 U B1218 61.456 -87.956 -8.435 1.00 36.29 O
ATOM 4 OP2 U B1218 60.080 -86.019 -9.394 1.00 36.65 O
ATOM 5 O5' U B1218 62.578 -85.870 -9.238 1.00 32.27 O
ATOM 6 C5' U B1218 63.814 -86.357 -8.713 1.00 34.13 C
ATOM 7 C4' U B1218 64.706 -85.196 -8.348 1.00 39.24 C
ATOM 8 O4' U B1218 64.932 -84.408 -9.539 1.00 35.29 O
ATOM 9 C3' U B1218 64.113 -84.215 -7.344 1.00 42.23 C
ATOM 10 O3' U B1218 64.459 -84.600 -6.009 1.00 43.63 O
ATOM 11 C2' U B1218 64.802 -82.901 -7.690 1.00 40.21 C
ATOM 12 O2' U B1218 66.031 -82.794 -7.016 1.00 43.39 O
ATOM 13 C1' U B1218 65.067 -83.051 -9.192 1.00 36.13 C
ATOM 14 N1 U B1218 64.234 -82.244 -10.096 1.00 43.98 N
ATOM 15 C2 U B1218 64.529 -80.897 -10.225 1.00 46.65 C
ATOM 16 O2 U B1218 65.436 -80.354 -9.626 1.00 47.20 O
ATOM 17 N3 U B1218 63.722 -80.204 -11.092 1.00 41.57 N
ATOM 18 C4 U B1218 62.684 -80.701 -11.840 1.00 43.88 C
ATOM 19 O4 U B1218 62.124 -79.969 -12.660 1.00 43.82 O
ATOM 20 C5 U B1218 62.435 -82.096 -11.650 1.00 40.54 C
ATOM 21 C6 U B1218 63.198 -82.804 -10.806 1.00 37.65 C
ATOM 22 P G B1219 63.314 -84.787 -4.876 1.00 43.33 P
ATOM 23 OP1 G B1219 63.871 -85.744 -3.877 1.00 36.62 O
ATOM 24 OP2 G B1219 62.006 -85.108 -5.541 1.00 41.78 O
ATOM 25 O5' G B1219 63.200 -83.338 -4.212 1.00 44.30 O
TER
ATOM 2 P G A1219 63.314 -84.787 -4.876 1.00 43.33 P
ATOM 3 OP1 G A1219 63.871 -85.744 -3.877 1.00 36.62 O
ATOM 4 OP2 G A1219 62.006 -85.108 -5.541 1.00 41.78 O
ATOM 5 O5' G A1219 63.200 -83.338 -4.212 1.00 44.30 O
ATOM 6 C5' G A1219 64.325 -82.696 -3.601 1.00 42.24 C
ATOM 7 C4' G A1219 64.303 -81.224 -3.925 1.00 38.82 C
ATOM 8 O4' G A1219 64.276 -81.156 -5.369 1.00 38.69 O
ATOM 9 C3' G A1219 63.087 -80.415 -3.455 1.00 36.03 C
ATOM 10 O3' G A1219 63.288 -79.803 -2.157 1.00 30.19 O
ATOM 11 C2' G A1219 62.986 -79.334 -4.530 1.00 37.94 C
ATOM 12 O2' G A1219 63.821 -78.223 -4.301 1.00 39.56 O
ATOM 13 C1' G A1219 63.523 -80.042 -5.771 1.00 37.84 C
ATOM 14 N9 G A1219 62.506 -80.468 -6.725 1.00 38.46 N
ATOM 15 C8 G A1219 61.769 -81.627 -6.714 1.00 44.80 C
ATOM 16 N7 G A1219 60.933 -81.708 -7.715 1.00 45.74 N
ATOM 17 C5 G A1219 61.136 -80.534 -8.431 1.00 43.72 C
ATOM 18 C6 G A1219 60.518 -80.049 -9.631 1.00 47.45 C
ATOM 19 O6 G A1219 59.623 -80.573 -10.322 1.00 50.66 O
ATOM 20 N1 G A1219 61.040 -78.816 -10.008 1.00 45.35 N
ATOM 21 C2 G A1219 62.005 -78.124 -9.321 1.00 44.28 C
ATOM 22 N2 G A1219 62.355 -76.928 -9.825 1.00 42.49 N
ATOM 23 N3 G A1219 62.580 -78.560 -8.216 1.00 46.37 N
ATOM 24 C4 G A1219 62.104 -79.762 -7.831 1.00 40.41 C
ATOM 25 P A A1220 62.137 -79.854 -0.996 1.00 34.57 P
ATOM 26 OP1 A A1220 61.447 -78.551 -0.813 1.00 24.77 O
ATOM 27 OP2 A A1220 62.786 -80.491 0.183 1.00 40.22 O
ATOM 28 O5' A A1220 61.052 -80.927 -1.482 1.00 31.78 O
TER
ATOM 1 O3' A B1217 61.533 -87.431 -10.883 1.00 23.89 O
ATOM 2 P U B1218 61.319 -86.838 -9.408 1.00 35.08 P
ATOM 3 OP1 U B1218 61.456 -87.956 -8.435 1.00 36.29 O
ATOM 4 OP2 U B1218 60.080 -86.019 -9.394 1.00 36.65 O
ATOM 5 O5' U B1218 62.578 -85.870 -9.238 1.00 32.27 O
ATOM 6 C5' U B1218 63.814 -86.357 -8.713 1.00 34.13 C
ATOM 7 C4' U B1218 64.706 -85.196 -8.348 1.00 39.24 C
ATOM 8 O4' U B1218 64.932 -84.408 -9.539 1.00 35.29 O
ATOM 9 C3' U B1218 64.113 -84.215 -7.344 1.00 42.23 C
ATOM 10 O3' U B1218 64.459 -84.600 -6.009 1.00 43.63 O
ATOM 11 C2' U B1218 64.802 -82.901 -7.690 1.00 40.21 C
ATOM 12 O2' U B1218 66.031 -82.794 -7.016 1.00 43.39 O
ATOM 13 C1' U B1218 65.067 -83.051 -9.192 1.00 36.13 C
ATOM 14 N1 U B1218 64.234 -82.244 -10.096 1.00 43.98 N
ATOM 15 C2 U B1218 64.529 -80.897 -10.225 1.00 46.65 C
ATOM 16 O2 U B1218 65.436 -80.354 -9.626 1.00 47.20 O
ATOM 17 N3 U B1218 63.722 -80.204 -11.092 1.00 41.57 N
ATOM 18 C4 U B1218 62.684 -80.701 -11.840 1.00 43.88 C
ATOM 19 O4 U B1218 62.124 -79.969 -12.660 1.00 43.82 O
ATOM 20 C5 U B1218 62.435 -82.096 -11.650 1.00 40.54 C
ATOM 21 C6 U B1218 63.198 -82.804 -10.806 1.00 37.65 C
ATOM 22 P G B1219 63.314 -84.787 -4.876 1.00 43.33 P
ATOM 23 OP1 G B1219 63.871 -85.744 -3.877 1.00 36.62 O
ATOM 24 OP2 G B1219 62.006 -85.108 -5.541 1.00 41.78 O
ATOM 25 O5' G B1219 63.200 -83.338 -4.212 1.00 44.30 O
TER
Atoms:
OP1: (63.871,-85.744,-3.877)
OP2: (62.006,-85.108,-5.541)
C3': (63.087,-80.415,-3.455)
C1': (63.523,-80.042,-5.771)
C5': (64.325,-82.696,-3.601)
O6: (59.623,-80.573,-10.322)
O4': (64.276,-81.156,-5.369)
C8: (61.769,-81.627,-6.714)
C2: (62.005,-78.124,-9.321)
C6: (60.518,-80.049,-9.631)
C5: (61.136,-80.534,-8.431)
C4: (62.104,-79.762,-7.831)
P: (63.314,-84.787,-4.876)
C4': (64.303,-81.224,-3.925)
C2': (62.986,-79.334,-4.530)
O2': (63.821,-78.223,-4.301)
N1: (61.040,-78.816,-10.008)
N2: (62.355,-76.928,-9.825)
N3: (62.580,-78.560,-8.216)
N7: (60.933,-81.708,-7.715)
N9: (62.506,-80.468,-6.725)
O5': (63.200,-83.338,-4.212)
O3': (63.288,-79.803,-2.157)
OP2: (62.006,-85.108,-5.541)
C3': (63.087,-80.415,-3.455)
C1': (63.523,-80.042,-5.771)
C5': (64.325,-82.696,-3.601)
O6: (59.623,-80.573,-10.322)
O4': (64.276,-81.156,-5.369)
C8: (61.769,-81.627,-6.714)
C2: (62.005,-78.124,-9.321)
C6: (60.518,-80.049,-9.631)
C5: (61.136,-80.534,-8.431)
C4: (62.104,-79.762,-7.831)
P: (63.314,-84.787,-4.876)
C4': (64.303,-81.224,-3.925)
C2': (62.986,-79.334,-4.530)
O2': (63.821,-78.223,-4.301)
N1: (61.040,-78.816,-10.008)
N2: (62.355,-76.928,-9.825)
N3: (62.580,-78.560,-8.216)
N7: (60.933,-81.708,-7.715)
N9: (62.506,-80.468,-6.725)
O5': (63.200,-83.338,-4.212)
O3': (63.288,-79.803,-2.157)
C4: (62.684,-80.701,-11.840)
N3: (63.722,-80.204,-11.092)
OP1: (61.456,-87.956,-8.435)
OP2: (60.080,-86.019,-9.394)
C2: (64.529,-80.897,-10.225)
C1': (65.067,-83.051,-9.192)
C3': (64.113,-84.215,-7.344)
O5': (62.578,-85.870,-9.238)
O4': (64.932,-84.408,-9.539)
C5': (63.814,-86.357,-8.713)
P: (61.319,-86.838,-9.408)
C4': (64.706,-85.196,-8.348)
C2': (64.802,-82.901,-7.690)
O2': (66.031,-82.794,-7.016)
N1: (64.234,-82.244,-10.096)
O4: (62.124,-79.969,-12.660)
O2: (65.436,-80.354,-9.626)
C6: (63.198,-82.804,-10.806)
C5: (62.435,-82.096,-11.650)
O3': (64.459,-84.600,-6.009)
N3: (63.722,-80.204,-11.092)
OP1: (61.456,-87.956,-8.435)
OP2: (60.080,-86.019,-9.394)
C2: (64.529,-80.897,-10.225)
C1': (65.067,-83.051,-9.192)
C3': (64.113,-84.215,-7.344)
O5': (62.578,-85.870,-9.238)
O4': (64.932,-84.408,-9.539)
C5': (63.814,-86.357,-8.713)
P: (61.319,-86.838,-9.408)
C4': (64.706,-85.196,-8.348)
C2': (64.802,-82.901,-7.690)
O2': (66.031,-82.794,-7.016)
N1: (64.234,-82.244,-10.096)
O4: (62.124,-79.969,-12.660)
O2: (65.436,-80.354,-9.626)
C6: (63.198,-82.804,-10.806)
C5: (62.435,-82.096,-11.650)
O3': (64.459,-84.600,-6.009)
Image (generated by PyMOL):