ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2HVY:E11:E10

Extra

PDB:
ATOM 1 O3' U A 10 -52.965 -4.321 36.351 1.00 41.87 O
ATOM 2 P G A 11 -52.770 -5.586 37.317 1.00 42.10 P
ATOM 3 OP1 G A 11 -54.116 -6.050 37.727 1.00 42.07 O
ATOM 4 OP2 G A 11 -51.770 -5.250 38.357 1.00 42.03 O
ATOM 5 O5' G A 11 -52.114 -6.674 36.346 1.00 42.33 O
ATOM 6 C5' G A 11 -52.819 -7.156 35.201 1.00 42.72 C
ATOM 7 C4' G A 11 -51.882 -7.893 34.258 1.00 43.00 C
ATOM 8 O4' G A 11 -50.748 -7.046 33.937 1.00 43.08 O
ATOM 9 C3' G A 11 -51.322 -9.201 34.811 1.00 43.14 C
ATOM 10 O3' G A 11 -51.570 -10.257 33.885 1.00 43.42 O
ATOM 11 C2' G A 11 -49.828 -8.943 35.019 1.00 43.11 C
ATOM 12 O2' G A 11 -49.020 -10.047 34.656 1.00 42.98 O
ATOM 13 C1' G A 11 -49.535 -7.753 34.105 1.00 43.17 C
ATOM 14 N9 G A 11 -48.538 -6.830 34.651 1.00 43.18 N
ATOM 15 C8 G A 11 -48.694 -5.996 35.734 1.00 43.19 C
ATOM 16 N7 G A 11 -47.639 -5.279 36.004 1.00 43.16 N
ATOM 17 C5 G A 11 -46.718 -5.659 35.039 1.00 43.17 C
ATOM 18 C6 G A 11 -45.386 -5.217 34.826 1.00 43.16 C
ATOM 19 O6 G A 11 -44.747 -4.378 35.475 1.00 43.17 O
ATOM 20 N1 G A 11 -44.788 -5.852 33.736 1.00 43.19 N
ATOM 21 C2 G A 11 -45.406 -6.800 32.949 1.00 43.23 C
ATOM 22 N2 G A 11 -44.675 -7.302 31.943 1.00 43.23 N
ATOM 23 N3 G A 11 -46.654 -7.223 33.137 1.00 43.17 N
ATOM 24 C4 G A 11 -47.253 -6.614 34.196 1.00 43.16 C
ATOM 25 P A A 12 -52.736 -11.331 34.130 1.00 43.68 P
ATOM 26 OP1 A A 12 -53.703 -11.194 33.018 1.00 43.62 O
ATOM 27 OP2 A A 12 -53.210 -11.245 35.532 1.00 43.62 O
ATOM 28 O5' A A 12 -51.947 -12.714 33.978 1.00 43.69 O
TER

ATOM 1 O3' U B 9 -51.435 1.271 38.623 1.00 41.90 O
ATOM 2 P U B 10 -51.123 -0.191 39.209 1.00 41.80 P
ATOM 3 OP1 U B 10 -52.179 -0.512 40.195 1.00 41.83 O
ATOM 4 OP2 U B 10 -49.702 -0.256 39.620 1.00 41.76 O
ATOM 5 O5' U B 10 -51.294 -1.130 37.925 1.00 41.79 O
ATOM 6 C5' U B 10 -52.556 -1.251 37.264 1.00 41.74 C
ATOM 7 C4' U B 10 -52.416 -2.002 35.951 1.00 41.69 C
ATOM 8 O4' U B 10 -51.460 -1.325 35.098 1.00 41.51 O
ATOM 9 C3' U B 10 -51.888 -3.424 36.080 1.00 41.68 C
ATOM 10 O3' U B 10 -52.965 -4.321 36.351 1.00 41.87 O
ATOM 11 C2' U B 10 -51.238 -3.668 34.719 1.00 41.56 C
ATOM 12 O2' U B 10 -52.142 -4.158 33.746 1.00 41.42 O
ATOM 13 C1' U B 10 -50.741 -2.273 34.326 1.00 41.49 C
ATOM 14 N1 U B 10 -49.253 -2.066 34.502 1.00 41.46 N
ATOM 15 C2 U B 10 -48.379 -2.464 33.498 1.00 41.45 C
ATOM 16 O2 U B 10 -48.734 -2.985 32.454 1.00 41.46 O
ATOM 17 N3 U B 10 -47.047 -2.229 33.758 1.00 41.42 N
ATOM 18 C4 U B 10 -46.506 -1.648 34.894 1.00 41.41 C
ATOM 19 O4 U B 10 -45.292 -1.502 34.983 1.00 41.39 O
ATOM 20 C5 U B 10 -47.471 -1.259 35.895 1.00 41.41 C
ATOM 21 C6 U B 10 -48.774 -1.479 35.665 1.00 41.42 C
ATOM 22 P G B 11 -52.770 -5.586 37.317 1.00 42.10 P
ATOM 23 OP1 G B 11 -54.116 -6.050 37.727 1.00 42.07 O
ATOM 24 OP2 G B 11 -51.770 -5.250 38.357 1.00 42.03 O
ATOM 25 O5' G B 11 -52.114 -6.674 36.346 1.00 42.33 O
TER

Atoms:
OP1: (-54.116,-6.050,37.727)
OP2: (-51.770,-5.250,38.357)
C3': (-51.322,-9.201,34.811)
C1': (-49.535,-7.753,34.105)
C5': (-52.819,-7.156,35.201)
O6: (-44.747,-4.378,35.475)
O4': (-50.748,-7.046,33.937)
C8: (-48.694,-5.996,35.734)
C2: (-45.406,-6.800,32.949)
C6: (-45.386,-5.217,34.826)
C5: (-46.718,-5.659,35.039)
C4: (-47.253,-6.614,34.196)
P: (-52.770,-5.586,37.317)
C4': (-51.882,-7.893,34.258)
C2': (-49.828,-8.943,35.019)
O2': (-49.020,-10.047,34.656)
N1: (-44.788,-5.852,33.736)
N2: (-44.675,-7.302,31.943)
N3: (-46.654,-7.223,33.137)
N7: (-47.639,-5.279,36.004)
N9: (-48.538,-6.830,34.651)
O5': (-52.114,-6.674,36.346)
O3': (-51.570,-10.257,33.885)
C4: (-46.506,-1.648,34.894)
N3: (-47.047,-2.229,33.758)
OP1: (-52.179,-0.512,40.195)
OP2: (-49.702,-0.256,39.620)
C2: (-48.379,-2.464,33.498)
C1': (-50.741,-2.273,34.326)
C3': (-51.888,-3.424,36.080)
O5': (-51.294,-1.130,37.925)
O4': (-51.460,-1.325,35.098)
C5': (-52.556,-1.251,37.264)
P: (-51.123,-0.191,39.209)
C4': (-52.416,-2.002,35.951)
C2': (-51.238,-3.668,34.719)
O2': (-52.142,-4.158,33.746)
N1: (-49.253,-2.066,34.502)
O4: (-45.292,-1.502,34.983)
O2: (-48.734,-2.985,32.454)
C6: (-48.774,-1.479,35.665)
C5: (-47.471,-1.259,35.895)
O3': (-52.965,-4.321,36.351)
Image (generated by PyMOL):
PyMOL image
show in jmol