Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A509:A508
Extra
PDB:
ATOM 1 O3' A A 508 28.300 134.759 79.426 1.00 35.65 O
ATOM 2 P A A 509 28.365 135.671 80.739 1.00 36.32 P
ATOM 3 OP1 A A 509 27.906 134.819 81.859 1.00 35.68 O
ATOM 4 OP2 A A 509 27.689 136.958 80.468 1.00 36.18 O
ATOM 5 O5' A A 509 29.911 135.949 80.956 1.00 37.29 O
ATOM 6 C5' A A 509 30.832 134.896 81.253 1.00 37.04 C
ATOM 7 C4' A A 509 32.236 135.433 81.187 1.00 37.14 C
ATOM 8 O4' A A 509 32.496 135.928 79.847 1.00 36.47 O
ATOM 9 C3' A A 509 32.494 136.668 82.034 1.00 36.79 C
ATOM 10 O3' A A 509 32.715 136.359 83.407 1.00 36.24 O
ATOM 11 C2' A A 509 33.758 137.215 81.394 1.00 36.23 C
ATOM 12 O2' A A 509 34.882 136.486 81.824 1.00 38.46 O
ATOM 13 C1' A A 509 33.503 136.925 79.911 1.00 36.33 C
ATOM 14 N9 A A 509 33.076 138.106 79.146 1.00 37.62 N
ATOM 15 C8 A A 509 31.882 138.777 79.226 1.00 37.41 C
ATOM 16 N7 A A 509 31.818 139.834 78.457 1.00 37.18 N
ATOM 17 C5 A A 509 33.050 139.860 77.815 1.00 37.30 C
ATOM 18 C6 A A 509 33.627 140.757 76.879 1.00 36.97 C
ATOM 19 N6 A A 509 33.024 141.860 76.432 1.00 37.80 N
ATOM 20 N1 A A 509 34.867 140.481 76.428 1.00 36.22 N
ATOM 21 C2 A A 509 35.489 139.401 76.903 1.00 35.83 C
ATOM 22 N3 A A 509 35.069 138.507 77.790 1.00 37.04 N
ATOM 23 C4 A A 509 33.827 138.793 78.214 1.00 37.42 C
ATOM 24 P U A 510 31.904 137.154 84.544 1.00 37.22 P
ATOM 25 OP1 U A 510 32.485 136.786 85.853 1.00 36.83 O
ATOM 26 OP2 U A 510 30.463 136.919 84.296 1.00 36.21 O
ATOM 27 O5' U A 510 32.183 138.695 84.245 1.00 34.86 O
TER
ATOM 1 O3' A B 507 24.922 136.457 74.682 1.00 38.69 O
ATOM 2 P A B 508 25.232 137.150 76.103 1.00 38.95 P
ATOM 3 OP1 A B 508 24.084 136.822 76.977 1.00 39.16 O
ATOM 4 OP2 A B 508 25.620 138.573 75.915 1.00 38.67 O
ATOM 5 O5' A B 508 26.524 136.387 76.633 1.00 39.46 O
ATOM 6 C5' A B 508 26.534 134.966 76.830 1.00 39.58 C
ATOM 7 C4' A B 508 27.935 134.505 77.084 1.00 39.01 C
ATOM 8 O4' A B 508 28.733 134.719 75.896 1.00 39.09 O
ATOM 9 C3' A B 508 28.649 135.292 78.164 1.00 37.76 C
ATOM 10 O3' A B 508 28.300 134.759 79.426 1.00 35.65 O
ATOM 11 C2' A B 508 30.108 135.056 77.807 1.00 40.26 C
ATOM 12 O2' A B 508 30.582 133.802 78.258 1.00 42.54 O
ATOM 13 C1' A B 508 30.050 135.063 76.276 1.00 40.46 C
ATOM 14 N9 A B 508 30.384 136.362 75.699 1.00 41.45 N
ATOM 15 C8 A B 508 29.558 137.403 75.340 1.00 41.94 C
ATOM 16 N7 A B 508 30.197 138.431 74.826 1.00 42.12 N
ATOM 17 C5 A B 508 31.529 138.039 74.847 1.00 41.41 C
ATOM 18 C6 A B 508 32.710 138.673 74.429 1.00 40.72 C
ATOM 19 N6 A B 508 32.750 139.875 73.847 1.00 39.67 N
ATOM 20 N1 A B 508 33.869 138.018 74.622 1.00 41.14 N
ATOM 21 C2 A B 508 33.838 136.801 75.176 1.00 41.28 C
ATOM 22 N3 A B 508 32.794 136.089 75.592 1.00 40.75 N
ATOM 23 C4 A B 508 31.657 136.774 75.398 1.00 41.90 C
ATOM 24 P A B 509 28.365 135.671 80.739 1.00 36.32 P
ATOM 25 OP1 A B 509 27.906 134.819 81.859 1.00 35.68 O
ATOM 26 OP2 A B 509 27.689 136.958 80.468 1.00 36.18 O
ATOM 27 O5' A B 509 29.911 135.949 80.956 1.00 37.29 O
TER
ATOM 2 P A A 509 28.365 135.671 80.739 1.00 36.32 P
ATOM 3 OP1 A A 509 27.906 134.819 81.859 1.00 35.68 O
ATOM 4 OP2 A A 509 27.689 136.958 80.468 1.00 36.18 O
ATOM 5 O5' A A 509 29.911 135.949 80.956 1.00 37.29 O
ATOM 6 C5' A A 509 30.832 134.896 81.253 1.00 37.04 C
ATOM 7 C4' A A 509 32.236 135.433 81.187 1.00 37.14 C
ATOM 8 O4' A A 509 32.496 135.928 79.847 1.00 36.47 O
ATOM 9 C3' A A 509 32.494 136.668 82.034 1.00 36.79 C
ATOM 10 O3' A A 509 32.715 136.359 83.407 1.00 36.24 O
ATOM 11 C2' A A 509 33.758 137.215 81.394 1.00 36.23 C
ATOM 12 O2' A A 509 34.882 136.486 81.824 1.00 38.46 O
ATOM 13 C1' A A 509 33.503 136.925 79.911 1.00 36.33 C
ATOM 14 N9 A A 509 33.076 138.106 79.146 1.00 37.62 N
ATOM 15 C8 A A 509 31.882 138.777 79.226 1.00 37.41 C
ATOM 16 N7 A A 509 31.818 139.834 78.457 1.00 37.18 N
ATOM 17 C5 A A 509 33.050 139.860 77.815 1.00 37.30 C
ATOM 18 C6 A A 509 33.627 140.757 76.879 1.00 36.97 C
ATOM 19 N6 A A 509 33.024 141.860 76.432 1.00 37.80 N
ATOM 20 N1 A A 509 34.867 140.481 76.428 1.00 36.22 N
ATOM 21 C2 A A 509 35.489 139.401 76.903 1.00 35.83 C
ATOM 22 N3 A A 509 35.069 138.507 77.790 1.00 37.04 N
ATOM 23 C4 A A 509 33.827 138.793 78.214 1.00 37.42 C
ATOM 24 P U A 510 31.904 137.154 84.544 1.00 37.22 P
ATOM 25 OP1 U A 510 32.485 136.786 85.853 1.00 36.83 O
ATOM 26 OP2 U A 510 30.463 136.919 84.296 1.00 36.21 O
ATOM 27 O5' U A 510 32.183 138.695 84.245 1.00 34.86 O
TER
ATOM 1 O3' A B 507 24.922 136.457 74.682 1.00 38.69 O
ATOM 2 P A B 508 25.232 137.150 76.103 1.00 38.95 P
ATOM 3 OP1 A B 508 24.084 136.822 76.977 1.00 39.16 O
ATOM 4 OP2 A B 508 25.620 138.573 75.915 1.00 38.67 O
ATOM 5 O5' A B 508 26.524 136.387 76.633 1.00 39.46 O
ATOM 6 C5' A B 508 26.534 134.966 76.830 1.00 39.58 C
ATOM 7 C4' A B 508 27.935 134.505 77.084 1.00 39.01 C
ATOM 8 O4' A B 508 28.733 134.719 75.896 1.00 39.09 O
ATOM 9 C3' A B 508 28.649 135.292 78.164 1.00 37.76 C
ATOM 10 O3' A B 508 28.300 134.759 79.426 1.00 35.65 O
ATOM 11 C2' A B 508 30.108 135.056 77.807 1.00 40.26 C
ATOM 12 O2' A B 508 30.582 133.802 78.258 1.00 42.54 O
ATOM 13 C1' A B 508 30.050 135.063 76.276 1.00 40.46 C
ATOM 14 N9 A B 508 30.384 136.362 75.699 1.00 41.45 N
ATOM 15 C8 A B 508 29.558 137.403 75.340 1.00 41.94 C
ATOM 16 N7 A B 508 30.197 138.431 74.826 1.00 42.12 N
ATOM 17 C5 A B 508 31.529 138.039 74.847 1.00 41.41 C
ATOM 18 C6 A B 508 32.710 138.673 74.429 1.00 40.72 C
ATOM 19 N6 A B 508 32.750 139.875 73.847 1.00 39.67 N
ATOM 20 N1 A B 508 33.869 138.018 74.622 1.00 41.14 N
ATOM 21 C2 A B 508 33.838 136.801 75.176 1.00 41.28 C
ATOM 22 N3 A B 508 32.794 136.089 75.592 1.00 40.75 N
ATOM 23 C4 A B 508 31.657 136.774 75.398 1.00 41.90 C
ATOM 24 P A B 509 28.365 135.671 80.739 1.00 36.32 P
ATOM 25 OP1 A B 509 27.906 134.819 81.859 1.00 35.68 O
ATOM 26 OP2 A B 509 27.689 136.958 80.468 1.00 36.18 O
ATOM 27 O5' A B 509 29.911 135.949 80.956 1.00 37.29 O
TER
Atoms:
OP1: (27.906,134.819,81.859)
OP2: (27.689,136.958,80.468)
C3': (32.494,136.668,82.034)
C1': (33.503,136.925,79.911)
C5': (30.832,134.896,81.253)
O4': (32.496,135.928,79.847)
C8: (31.882,138.777,79.226)
O2': (34.882,136.486,81.824)
C6: (33.627,140.757,76.879)
C5: (33.050,139.860,77.815)
C4: (33.827,138.793,78.214)
P: (28.365,135.671,80.739)
C4': (32.236,135.433,81.187)
C2': (33.758,137.215,81.394)
C2: (35.489,139.401,76.903)
N1: (34.867,140.481,76.428)
N3: (35.069,138.507,77.790)
N6: (33.024,141.860,76.432)
N7: (31.818,139.834,78.457)
N9: (33.076,138.106,79.146)
O5': (29.911,135.949,80.956)
O3': (32.715,136.359,83.407)
OP2: (27.689,136.958,80.468)
C3': (32.494,136.668,82.034)
C1': (33.503,136.925,79.911)
C5': (30.832,134.896,81.253)
O4': (32.496,135.928,79.847)
C8: (31.882,138.777,79.226)
O2': (34.882,136.486,81.824)
C6: (33.627,140.757,76.879)
C5: (33.050,139.860,77.815)
C4: (33.827,138.793,78.214)
P: (28.365,135.671,80.739)
C4': (32.236,135.433,81.187)
C2': (33.758,137.215,81.394)
C2: (35.489,139.401,76.903)
N1: (34.867,140.481,76.428)
N3: (35.069,138.507,77.790)
N6: (33.024,141.860,76.432)
N7: (31.818,139.834,78.457)
N9: (33.076,138.106,79.146)
O5': (29.911,135.949,80.956)
O3': (32.715,136.359,83.407)
OP1: (24.084,136.822,76.977)
OP2: (25.620,138.573,75.915)
C3': (28.649,135.292,78.164)
C1': (30.050,135.063,76.276)
C5': (26.534,134.966,76.830)
O4': (28.733,134.719,75.896)
C8: (29.558,137.403,75.340)
O2': (30.582,133.802,78.258)
C6: (32.710,138.673,74.429)
C5: (31.529,138.039,74.847)
C4: (31.657,136.774,75.398)
P: (25.232,137.150,76.103)
C4': (27.935,134.505,77.084)
C2': (30.108,135.056,77.807)
C2: (33.838,136.801,75.176)
N1: (33.869,138.018,74.622)
N3: (32.794,136.089,75.592)
N6: (32.750,139.875,73.847)
N7: (30.197,138.431,74.826)
N9: (30.384,136.362,75.699)
O5': (26.524,136.387,76.633)
O3': (28.300,134.759,79.426)
OP2: (25.620,138.573,75.915)
C3': (28.649,135.292,78.164)
C1': (30.050,135.063,76.276)
C5': (26.534,134.966,76.830)
O4': (28.733,134.719,75.896)
C8: (29.558,137.403,75.340)
O2': (30.582,133.802,78.258)
C6: (32.710,138.673,74.429)
C5: (31.529,138.039,74.847)
C4: (31.657,136.774,75.398)
P: (25.232,137.150,76.103)
C4': (27.935,134.505,77.084)
C2': (30.108,135.056,77.807)
C2: (33.838,136.801,75.176)
N1: (33.869,138.018,74.622)
N3: (32.794,136.089,75.592)
N6: (32.750,139.875,73.847)
N7: (30.197,138.431,74.826)
N9: (30.384,136.362,75.699)
O5': (26.524,136.387,76.633)
O3': (28.300,134.759,79.426)
Image (generated by PyMOL):