Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:E9:E8
Extra
PDB:
ATOM 1 O3' A A 8 0.874 33.502 113.564 1.00 82.90 O
ATOM 2 P A A 9 -0.715 33.321 113.498 1.00 98.62 P
ATOM 3 OP1 A A 9 -1.321 34.580 112.991 1.00104.28 O
ATOM 4 OP2 A A 9 -1.133 32.781 114.823 1.00 67.10 O
ATOM 5 O5' A A 9 -0.916 32.193 112.394 1.00 84.86 O
ATOM 6 C5' A A 9 -0.386 32.358 111.083 1.00 89.86 C
ATOM 7 C4' A A 9 -0.388 31.035 110.354 1.00101.53 C
ATOM 8 O4' A A 9 0.568 30.133 110.977 1.00102.43 O
ATOM 9 C3' A A 9 -1.709 30.285 110.402 1.00103.54 C
ATOM 10 O3' A A 9 -2.576 30.737 109.365 1.00105.53 O
ATOM 11 C2' A A 9 -1.258 28.845 110.184 1.00 98.35 C
ATOM 12 O2' A A 9 -0.981 28.580 108.826 1.00118.22 O
ATOM 13 C1' A A 9 0.051 28.812 110.978 1.00 87.28 C
ATOM 14 N9 A A 9 -0.129 28.394 112.369 1.00 84.30 N
ATOM 15 C8 A A 9 -0.222 29.201 113.476 1.00 84.07 C
ATOM 16 N7 A A 9 -0.404 28.544 114.596 1.00 83.21 N
ATOM 17 C5 A A 9 -0.424 27.214 114.203 1.00 79.00 C
ATOM 18 C6 A A 9 -0.582 26.022 114.923 1.00 80.83 C
ATOM 19 N6 A A 9 -0.754 25.976 116.243 1.00 79.30 N
ATOM 20 N1 A A 9 -0.557 24.861 114.232 1.00 79.53 N
ATOM 21 C2 A A 9 -0.384 24.911 112.909 1.00 71.53 C
ATOM 22 N3 A A 9 -0.223 25.970 112.118 1.00 78.20 N
ATOM 23 C4 A A 9 -0.252 27.105 112.835 1.00 78.09 C
ATOM 24 P G A 10 -4.128 31.027 109.686 1.00109.75 P
ATOM 25 OP1 G A 10 -4.703 31.714 108.501 1.00113.57 O
ATOM 26 OP2 G A 10 -4.222 31.665 111.025 1.00 98.53 O
ATOM 27 O5' G A 10 -4.787 29.582 109.792 1.00106.10 O
TER
ATOM 1 O3' G B 7 2.516 33.229 119.360 1.00 90.57 O
ATOM 2 P A B 8 1.108 32.912 118.642 1.00 99.24 P
ATOM 3 OP1 A B 8 0.261 34.131 118.699 1.00 92.63 O
ATOM 4 OP2 A B 8 0.585 31.633 119.185 1.00 92.21 O
ATOM 5 O5' A B 8 1.520 32.704 117.119 1.00 82.36 O
ATOM 6 C5' A B 8 2.287 33.694 116.450 1.00 65.65 C
ATOM 7 C4' A B 8 2.730 33.193 115.100 1.00 80.32 C
ATOM 8 O4' A B 8 3.721 32.145 115.265 1.00 83.95 O
ATOM 9 C3' A B 8 1.648 32.542 114.259 1.00 85.21 C
ATOM 10 O3' A B 8 0.874 33.502 113.564 1.00 82.90 O
ATOM 11 C2' A B 8 2.471 31.695 113.306 1.00 79.91 C
ATOM 12 O2' A B 8 3.064 32.487 112.299 1.00 81.67 O
ATOM 13 C1' A B 8 3.550 31.166 114.252 1.00 78.86 C
ATOM 14 N9 A B 8 3.161 29.917 114.905 1.00 72.09 N
ATOM 15 C8 A B 8 2.642 29.767 116.165 1.00 63.15 C
ATOM 16 N7 A B 8 2.403 28.524 116.494 1.00 63.14 N
ATOM 17 C5 A B 8 2.785 27.804 115.372 1.00 67.09 C
ATOM 18 C6 A B 8 2.782 26.425 115.085 1.00 68.66 C
ATOM 19 N6 A B 8 2.367 25.489 115.948 1.00 61.09 N
ATOM 20 N1 A B 8 3.225 26.037 113.869 1.00 62.91 N
ATOM 21 C2 A B 8 3.642 26.975 113.010 1.00 71.76 C
ATOM 22 N3 A B 8 3.695 28.298 113.166 1.00 76.57 N
ATOM 23 C4 A B 8 3.248 28.651 114.383 1.00 66.28 C
ATOM 24 P A B 9 -0.715 33.321 113.498 1.00 98.62 P
ATOM 25 OP1 A B 9 -1.321 34.580 112.991 1.00104.28 O
ATOM 26 OP2 A B 9 -1.133 32.781 114.823 1.00 67.10 O
ATOM 27 O5' A B 9 -0.916 32.193 112.394 1.00 84.86 O
TER
ATOM 2 P A A 9 -0.715 33.321 113.498 1.00 98.62 P
ATOM 3 OP1 A A 9 -1.321 34.580 112.991 1.00104.28 O
ATOM 4 OP2 A A 9 -1.133 32.781 114.823 1.00 67.10 O
ATOM 5 O5' A A 9 -0.916 32.193 112.394 1.00 84.86 O
ATOM 6 C5' A A 9 -0.386 32.358 111.083 1.00 89.86 C
ATOM 7 C4' A A 9 -0.388 31.035 110.354 1.00101.53 C
ATOM 8 O4' A A 9 0.568 30.133 110.977 1.00102.43 O
ATOM 9 C3' A A 9 -1.709 30.285 110.402 1.00103.54 C
ATOM 10 O3' A A 9 -2.576 30.737 109.365 1.00105.53 O
ATOM 11 C2' A A 9 -1.258 28.845 110.184 1.00 98.35 C
ATOM 12 O2' A A 9 -0.981 28.580 108.826 1.00118.22 O
ATOM 13 C1' A A 9 0.051 28.812 110.978 1.00 87.28 C
ATOM 14 N9 A A 9 -0.129 28.394 112.369 1.00 84.30 N
ATOM 15 C8 A A 9 -0.222 29.201 113.476 1.00 84.07 C
ATOM 16 N7 A A 9 -0.404 28.544 114.596 1.00 83.21 N
ATOM 17 C5 A A 9 -0.424 27.214 114.203 1.00 79.00 C
ATOM 18 C6 A A 9 -0.582 26.022 114.923 1.00 80.83 C
ATOM 19 N6 A A 9 -0.754 25.976 116.243 1.00 79.30 N
ATOM 20 N1 A A 9 -0.557 24.861 114.232 1.00 79.53 N
ATOM 21 C2 A A 9 -0.384 24.911 112.909 1.00 71.53 C
ATOM 22 N3 A A 9 -0.223 25.970 112.118 1.00 78.20 N
ATOM 23 C4 A A 9 -0.252 27.105 112.835 1.00 78.09 C
ATOM 24 P G A 10 -4.128 31.027 109.686 1.00109.75 P
ATOM 25 OP1 G A 10 -4.703 31.714 108.501 1.00113.57 O
ATOM 26 OP2 G A 10 -4.222 31.665 111.025 1.00 98.53 O
ATOM 27 O5' G A 10 -4.787 29.582 109.792 1.00106.10 O
TER
ATOM 1 O3' G B 7 2.516 33.229 119.360 1.00 90.57 O
ATOM 2 P A B 8 1.108 32.912 118.642 1.00 99.24 P
ATOM 3 OP1 A B 8 0.261 34.131 118.699 1.00 92.63 O
ATOM 4 OP2 A B 8 0.585 31.633 119.185 1.00 92.21 O
ATOM 5 O5' A B 8 1.520 32.704 117.119 1.00 82.36 O
ATOM 6 C5' A B 8 2.287 33.694 116.450 1.00 65.65 C
ATOM 7 C4' A B 8 2.730 33.193 115.100 1.00 80.32 C
ATOM 8 O4' A B 8 3.721 32.145 115.265 1.00 83.95 O
ATOM 9 C3' A B 8 1.648 32.542 114.259 1.00 85.21 C
ATOM 10 O3' A B 8 0.874 33.502 113.564 1.00 82.90 O
ATOM 11 C2' A B 8 2.471 31.695 113.306 1.00 79.91 C
ATOM 12 O2' A B 8 3.064 32.487 112.299 1.00 81.67 O
ATOM 13 C1' A B 8 3.550 31.166 114.252 1.00 78.86 C
ATOM 14 N9 A B 8 3.161 29.917 114.905 1.00 72.09 N
ATOM 15 C8 A B 8 2.642 29.767 116.165 1.00 63.15 C
ATOM 16 N7 A B 8 2.403 28.524 116.494 1.00 63.14 N
ATOM 17 C5 A B 8 2.785 27.804 115.372 1.00 67.09 C
ATOM 18 C6 A B 8 2.782 26.425 115.085 1.00 68.66 C
ATOM 19 N6 A B 8 2.367 25.489 115.948 1.00 61.09 N
ATOM 20 N1 A B 8 3.225 26.037 113.869 1.00 62.91 N
ATOM 21 C2 A B 8 3.642 26.975 113.010 1.00 71.76 C
ATOM 22 N3 A B 8 3.695 28.298 113.166 1.00 76.57 N
ATOM 23 C4 A B 8 3.248 28.651 114.383 1.00 66.28 C
ATOM 24 P A B 9 -0.715 33.321 113.498 1.00 98.62 P
ATOM 25 OP1 A B 9 -1.321 34.580 112.991 1.00104.28 O
ATOM 26 OP2 A B 9 -1.133 32.781 114.823 1.00 67.10 O
ATOM 27 O5' A B 9 -0.916 32.193 112.394 1.00 84.86 O
TER
Atoms:
OP1: (-1.321,34.580,112.991)
OP2: (-1.133,32.781,114.823)
C3': (-1.709,30.285,110.402)
C1': (0.051,28.812,110.978)
C5': (-0.386,32.358,111.083)
O4': (0.568,30.133,110.977)
C8: (-0.222,29.201,113.476)
O2': (-0.981,28.580,108.826)
C6: (-0.582,26.022,114.923)
C5: (-0.424,27.214,114.203)
C4: (-0.252,27.105,112.835)
P: (-0.715,33.321,113.498)
C4': (-0.388,31.035,110.354)
C2': (-1.258,28.845,110.184)
C2: (-0.384,24.911,112.909)
N1: (-0.557,24.861,114.232)
N3: (-0.223,25.970,112.118)
N6: (-0.754,25.976,116.243)
N7: (-0.404,28.544,114.596)
N9: (-0.129,28.394,112.369)
O5': (-0.916,32.193,112.394)
O3': (-2.576,30.737,109.365)
OP2: (-1.133,32.781,114.823)
C3': (-1.709,30.285,110.402)
C1': (0.051,28.812,110.978)
C5': (-0.386,32.358,111.083)
O4': (0.568,30.133,110.977)
C8: (-0.222,29.201,113.476)
O2': (-0.981,28.580,108.826)
C6: (-0.582,26.022,114.923)
C5: (-0.424,27.214,114.203)
C4: (-0.252,27.105,112.835)
P: (-0.715,33.321,113.498)
C4': (-0.388,31.035,110.354)
C2': (-1.258,28.845,110.184)
C2: (-0.384,24.911,112.909)
N1: (-0.557,24.861,114.232)
N3: (-0.223,25.970,112.118)
N6: (-0.754,25.976,116.243)
N7: (-0.404,28.544,114.596)
N9: (-0.129,28.394,112.369)
O5': (-0.916,32.193,112.394)
O3': (-2.576,30.737,109.365)
OP1: (0.261,34.131,118.699)
OP2: (0.585,31.633,119.185)
C3': (1.648,32.542,114.259)
C1': (3.550,31.166,114.252)
C5': (2.287,33.694,116.450)
O4': (3.721,32.145,115.265)
C8: (2.642,29.767,116.165)
O2': (3.064,32.487,112.299)
C6: (2.782,26.425,115.085)
C5: (2.785,27.804,115.372)
C4: (3.248,28.651,114.383)
P: (1.108,32.912,118.642)
C4': (2.730,33.193,115.100)
C2': (2.471,31.695,113.306)
C2: (3.642,26.975,113.010)
N1: (3.225,26.037,113.869)
N3: (3.695,28.298,113.166)
N6: (2.367,25.489,115.948)
N7: (2.403,28.524,116.494)
N9: (3.161,29.917,114.905)
O5': (1.520,32.704,117.119)
O3': (0.874,33.502,113.564)
OP2: (0.585,31.633,119.185)
C3': (1.648,32.542,114.259)
C1': (3.550,31.166,114.252)
C5': (2.287,33.694,116.450)
O4': (3.721,32.145,115.265)
C8: (2.642,29.767,116.165)
O2': (3.064,32.487,112.299)
C6: (2.782,26.425,115.085)
C5: (2.785,27.804,115.372)
C4: (3.248,28.651,114.383)
P: (1.108,32.912,118.642)
C4': (2.730,33.193,115.100)
C2': (2.471,31.695,113.306)
C2: (3.642,26.975,113.010)
N1: (3.225,26.037,113.869)
N3: (3.695,28.298,113.166)
N6: (2.367,25.489,115.948)
N7: (2.403,28.524,116.494)
N9: (3.161,29.917,114.905)
O5': (1.520,32.704,117.119)
O3': (0.874,33.502,113.564)
Image (generated by PyMOL):