Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0506:0505
Extra
PDB:
ATOM 1 O3' U A 505 20.852 141.296 64.718 1.00 32.24 O
ATOM 2 P G A 506 20.649 141.948 66.164 1.00 33.76 P
ATOM 3 OP1 G A 506 19.590 141.163 66.844 1.00 31.28 O
ATOM 4 OP2 G A 506 20.494 143.420 66.001 1.00 33.84 O
ATOM 5 O5' G A 506 22.028 141.675 66.901 1.00 34.04 O
ATOM 6 C5' G A 506 22.538 140.343 67.010 1.00 34.00 C
ATOM 7 C4' G A 506 23.920 140.360 67.603 1.00 33.55 C
ATOM 8 O4' G A 506 24.842 140.970 66.653 1.00 32.89 O
ATOM 9 C3' G A 506 24.071 141.154 68.904 1.00 33.02 C
ATOM 10 O3' G A 506 24.957 140.445 69.760 1.00 35.11 O
ATOM 11 C2' G A 506 24.763 142.429 68.430 1.00 32.08 C
ATOM 12 O2' G A 506 25.522 143.078 69.427 1.00 30.58 O
ATOM 13 C1' G A 506 25.676 141.852 67.357 1.00 32.31 C
ATOM 14 N9 G A 506 26.283 142.811 66.442 1.00 33.02 N
ATOM 15 C8 G A 506 25.737 143.973 65.951 1.00 34.32 C
ATOM 16 N7 G A 506 26.582 144.675 65.246 1.00 34.29 N
ATOM 17 C5 G A 506 27.747 143.919 65.255 1.00 35.21 C
ATOM 18 C6 G A 506 29.017 144.178 64.684 1.00 36.18 C
ATOM 19 O6 G A 506 29.390 145.175 64.055 1.00 39.09 O
ATOM 20 N1 G A 506 29.905 143.134 64.919 1.00 34.69 N
ATOM 21 C2 G A 506 29.616 141.998 65.619 1.00 34.44 C
ATOM 22 N2 G A 506 30.602 141.106 65.730 1.00 33.72 N
ATOM 23 N3 G A 506 28.445 141.751 66.172 1.00 35.38 N
ATOM 24 C4 G A 506 27.564 142.749 65.956 1.00 34.56 C
ATOM 25 P A A 507 24.714 140.443 71.347 1.00 37.37 P
ATOM 26 OP1 A A 507 23.271 140.675 71.629 1.00 36.65 O
ATOM 27 OP2 A A 507 25.736 141.333 71.964 1.00 35.89 O
ATOM 28 O5' A A 507 25.053 138.943 71.752 1.00 36.87 O
TER
ATOM 1 O3' A B 504 22.904 145.886 61.027 1.00 37.51 O
ATOM 2 P U B 505 22.895 145.712 62.621 1.00 38.11 P
ATOM 3 OP1 U B 505 21.693 146.377 63.174 1.00 38.24 O
ATOM 4 OP2 U B 505 24.230 146.085 63.126 1.00 39.53 O
ATOM 5 O5' U B 505 22.710 144.148 62.826 1.00 36.79 O
ATOM 6 C5' U B 505 21.497 143.486 62.437 1.00 34.75 C
ATOM 7 C4' U B 505 21.673 142.000 62.577 1.00 34.41 C
ATOM 8 O4' U B 505 22.800 141.592 61.763 1.00 34.06 O
ATOM 9 C3' U B 505 22.034 141.563 63.985 1.00 33.20 C
ATOM 10 O3' U B 505 20.852 141.296 64.718 1.00 32.24 O
ATOM 11 C2' U B 505 22.825 140.285 63.760 1.00 34.14 C
ATOM 12 O2' U B 505 21.962 139.177 63.610 1.00 33.64 O
ATOM 13 C1' U B 505 23.537 140.591 62.436 1.00 34.86 C
ATOM 14 N1 U B 505 24.944 141.019 62.515 1.00 36.64 N
ATOM 15 C2 U B 505 25.913 140.034 62.670 1.00 37.78 C
ATOM 16 O2 U B 505 25.645 138.853 62.799 1.00 38.61 O
ATOM 17 N3 U B 505 27.210 140.486 62.669 1.00 37.82 N
ATOM 18 C4 U B 505 27.634 141.789 62.540 1.00 37.72 C
ATOM 19 O4 U B 505 28.841 142.022 62.482 1.00 37.47 O
ATOM 20 C5 U B 505 26.579 142.756 62.415 1.00 36.79 C
ATOM 21 C6 U B 505 25.304 142.350 62.410 1.00 36.76 C
ATOM 22 P G B 506 20.649 141.948 66.164 1.00 33.76 P
ATOM 23 OP1 G B 506 19.590 141.163 66.844 1.00 31.28 O
ATOM 24 OP2 G B 506 20.494 143.420 66.001 1.00 33.84 O
ATOM 25 O5' G B 506 22.028 141.675 66.901 1.00 34.04 O
TER
ATOM 2 P G A 506 20.649 141.948 66.164 1.00 33.76 P
ATOM 3 OP1 G A 506 19.590 141.163 66.844 1.00 31.28 O
ATOM 4 OP2 G A 506 20.494 143.420 66.001 1.00 33.84 O
ATOM 5 O5' G A 506 22.028 141.675 66.901 1.00 34.04 O
ATOM 6 C5' G A 506 22.538 140.343 67.010 1.00 34.00 C
ATOM 7 C4' G A 506 23.920 140.360 67.603 1.00 33.55 C
ATOM 8 O4' G A 506 24.842 140.970 66.653 1.00 32.89 O
ATOM 9 C3' G A 506 24.071 141.154 68.904 1.00 33.02 C
ATOM 10 O3' G A 506 24.957 140.445 69.760 1.00 35.11 O
ATOM 11 C2' G A 506 24.763 142.429 68.430 1.00 32.08 C
ATOM 12 O2' G A 506 25.522 143.078 69.427 1.00 30.58 O
ATOM 13 C1' G A 506 25.676 141.852 67.357 1.00 32.31 C
ATOM 14 N9 G A 506 26.283 142.811 66.442 1.00 33.02 N
ATOM 15 C8 G A 506 25.737 143.973 65.951 1.00 34.32 C
ATOM 16 N7 G A 506 26.582 144.675 65.246 1.00 34.29 N
ATOM 17 C5 G A 506 27.747 143.919 65.255 1.00 35.21 C
ATOM 18 C6 G A 506 29.017 144.178 64.684 1.00 36.18 C
ATOM 19 O6 G A 506 29.390 145.175 64.055 1.00 39.09 O
ATOM 20 N1 G A 506 29.905 143.134 64.919 1.00 34.69 N
ATOM 21 C2 G A 506 29.616 141.998 65.619 1.00 34.44 C
ATOM 22 N2 G A 506 30.602 141.106 65.730 1.00 33.72 N
ATOM 23 N3 G A 506 28.445 141.751 66.172 1.00 35.38 N
ATOM 24 C4 G A 506 27.564 142.749 65.956 1.00 34.56 C
ATOM 25 P A A 507 24.714 140.443 71.347 1.00 37.37 P
ATOM 26 OP1 A A 507 23.271 140.675 71.629 1.00 36.65 O
ATOM 27 OP2 A A 507 25.736 141.333 71.964 1.00 35.89 O
ATOM 28 O5' A A 507 25.053 138.943 71.752 1.00 36.87 O
TER
ATOM 1 O3' A B 504 22.904 145.886 61.027 1.00 37.51 O
ATOM 2 P U B 505 22.895 145.712 62.621 1.00 38.11 P
ATOM 3 OP1 U B 505 21.693 146.377 63.174 1.00 38.24 O
ATOM 4 OP2 U B 505 24.230 146.085 63.126 1.00 39.53 O
ATOM 5 O5' U B 505 22.710 144.148 62.826 1.00 36.79 O
ATOM 6 C5' U B 505 21.497 143.486 62.437 1.00 34.75 C
ATOM 7 C4' U B 505 21.673 142.000 62.577 1.00 34.41 C
ATOM 8 O4' U B 505 22.800 141.592 61.763 1.00 34.06 O
ATOM 9 C3' U B 505 22.034 141.563 63.985 1.00 33.20 C
ATOM 10 O3' U B 505 20.852 141.296 64.718 1.00 32.24 O
ATOM 11 C2' U B 505 22.825 140.285 63.760 1.00 34.14 C
ATOM 12 O2' U B 505 21.962 139.177 63.610 1.00 33.64 O
ATOM 13 C1' U B 505 23.537 140.591 62.436 1.00 34.86 C
ATOM 14 N1 U B 505 24.944 141.019 62.515 1.00 36.64 N
ATOM 15 C2 U B 505 25.913 140.034 62.670 1.00 37.78 C
ATOM 16 O2 U B 505 25.645 138.853 62.799 1.00 38.61 O
ATOM 17 N3 U B 505 27.210 140.486 62.669 1.00 37.82 N
ATOM 18 C4 U B 505 27.634 141.789 62.540 1.00 37.72 C
ATOM 19 O4 U B 505 28.841 142.022 62.482 1.00 37.47 O
ATOM 20 C5 U B 505 26.579 142.756 62.415 1.00 36.79 C
ATOM 21 C6 U B 505 25.304 142.350 62.410 1.00 36.76 C
ATOM 22 P G B 506 20.649 141.948 66.164 1.00 33.76 P
ATOM 23 OP1 G B 506 19.590 141.163 66.844 1.00 31.28 O
ATOM 24 OP2 G B 506 20.494 143.420 66.001 1.00 33.84 O
ATOM 25 O5' G B 506 22.028 141.675 66.901 1.00 34.04 O
TER
Atoms:
OP1: (19.590,141.163,66.844)
OP2: (20.494,143.420,66.001)
C3': (24.071,141.154,68.904)
C1': (25.676,141.852,67.357)
C5': (22.538,140.343,67.010)
O6: (29.390,145.175,64.055)
O4': (24.842,140.970,66.653)
C8: (25.737,143.973,65.951)
C2: (29.616,141.998,65.619)
C6: (29.017,144.178,64.684)
C5: (27.747,143.919,65.255)
C4: (27.564,142.749,65.956)
P: (20.649,141.948,66.164)
C4': (23.920,140.360,67.603)
C2': (24.763,142.429,68.430)
O2': (25.522,143.078,69.427)
N1: (29.905,143.134,64.919)
N2: (30.602,141.106,65.730)
N3: (28.445,141.751,66.172)
N7: (26.582,144.675,65.246)
N9: (26.283,142.811,66.442)
O5': (22.028,141.675,66.901)
O3': (24.957,140.445,69.760)
OP2: (20.494,143.420,66.001)
C3': (24.071,141.154,68.904)
C1': (25.676,141.852,67.357)
C5': (22.538,140.343,67.010)
O6: (29.390,145.175,64.055)
O4': (24.842,140.970,66.653)
C8: (25.737,143.973,65.951)
C2: (29.616,141.998,65.619)
C6: (29.017,144.178,64.684)
C5: (27.747,143.919,65.255)
C4: (27.564,142.749,65.956)
P: (20.649,141.948,66.164)
C4': (23.920,140.360,67.603)
C2': (24.763,142.429,68.430)
O2': (25.522,143.078,69.427)
N1: (29.905,143.134,64.919)
N2: (30.602,141.106,65.730)
N3: (28.445,141.751,66.172)
N7: (26.582,144.675,65.246)
N9: (26.283,142.811,66.442)
O5': (22.028,141.675,66.901)
O3': (24.957,140.445,69.760)
C4: (27.634,141.789,62.540)
N3: (27.210,140.486,62.669)
OP1: (21.693,146.377,63.174)
OP2: (24.230,146.085,63.126)
C2: (25.913,140.034,62.670)
C1': (23.537,140.591,62.436)
C3': (22.034,141.563,63.985)
O5': (22.710,144.148,62.826)
O4': (22.800,141.592,61.763)
C5': (21.497,143.486,62.437)
P: (22.895,145.712,62.621)
C4': (21.673,142.000,62.577)
C2': (22.825,140.285,63.760)
O2': (21.962,139.177,63.610)
N1: (24.944,141.019,62.515)
O4: (28.841,142.022,62.482)
O2: (25.645,138.853,62.799)
C6: (25.304,142.350,62.410)
C5: (26.579,142.756,62.415)
O3': (20.852,141.296,64.718)
N3: (27.210,140.486,62.669)
OP1: (21.693,146.377,63.174)
OP2: (24.230,146.085,63.126)
C2: (25.913,140.034,62.670)
C1': (23.537,140.591,62.436)
C3': (22.034,141.563,63.985)
O5': (22.710,144.148,62.826)
O4': (22.800,141.592,61.763)
C5': (21.497,143.486,62.437)
P: (22.895,145.712,62.621)
C4': (21.673,142.000,62.577)
C2': (22.825,140.285,63.760)
O2': (21.962,139.177,63.610)
N1: (24.944,141.019,62.515)
O4: (28.841,142.022,62.482)
O2: (25.645,138.853,62.799)
C6: (25.304,142.350,62.410)
C5: (26.579,142.756,62.415)
O3': (20.852,141.296,64.718)
Image (generated by PyMOL):