Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0424:0423
Extra
PDB:
ATOM 1 O3' A A 423 60.801 117.449 16.537 1.00 49.85 O
ATOM 2 P A A 424 60.028 117.341 17.934 1.00 50.57 P
ATOM 3 OP1 A A 424 59.216 118.570 18.092 1.00 51.81 O
ATOM 4 OP2 A A 424 61.024 116.978 18.973 1.00 52.74 O
ATOM 5 O5' A A 424 59.046 116.108 17.726 1.00 50.85 O
ATOM 6 C5' A A 424 57.861 116.222 16.926 1.00 48.60 C
ATOM 7 C4' A A 424 57.055 114.959 17.045 1.00 48.83 C
ATOM 8 O4' A A 424 57.803 113.868 16.456 1.00 47.10 O
ATOM 9 C3' A A 424 56.799 114.525 18.481 1.00 48.61 C
ATOM 10 O3' A A 424 55.640 115.181 18.983 1.00 50.39 O
ATOM 11 C2' A A 424 56.630 113.018 18.351 1.00 47.07 C
ATOM 12 O2' A A 424 55.332 112.671 17.916 1.00 46.10 O
ATOM 13 C1' A A 424 57.628 112.695 17.232 1.00 45.90 C
ATOM 14 N9 A A 424 58.955 112.246 17.646 1.00 45.21 N
ATOM 15 C8 A A 424 60.042 113.023 17.954 1.00 44.78 C
ATOM 16 N7 A A 424 61.128 112.335 18.207 1.00 44.98 N
ATOM 17 C5 A A 424 60.725 111.014 18.077 1.00 44.16 C
ATOM 18 C6 A A 424 61.417 109.794 18.207 1.00 43.71 C
ATOM 19 N6 A A 424 62.713 109.701 18.507 1.00 42.85 N
ATOM 20 N1 A A 424 60.721 108.656 18.014 1.00 44.23 N
ATOM 21 C2 A A 424 59.419 108.747 17.716 1.00 46.11 C
ATOM 22 N3 A A 424 58.660 109.832 17.565 1.00 45.17 N
ATOM 23 C4 A A 424 59.382 110.945 17.755 1.00 44.69 C
ATOM 24 P A A 425 55.552 115.575 20.537 1.00 53.58 P
ATOM 25 OP1 A A 425 54.407 116.504 20.695 1.00 52.31 O
ATOM 26 OP2 A A 425 56.895 115.973 21.026 1.00 53.97 O
ATOM 27 O5' A A 425 55.170 114.209 21.254 1.00 54.88 O
TER
ATOM 1 O3' U B 422 66.802 115.849 15.986 1.00 45.58 O
ATOM 2 P A B 423 65.774 115.540 17.179 1.00 44.57 P
ATOM 3 OP1 A B 423 65.904 116.601 18.203 1.00 45.76 O
ATOM 4 OP2 A B 423 65.975 114.125 17.567 1.00 44.66 O
ATOM 5 O5' A B 423 64.341 115.715 16.506 1.00 45.05 O
ATOM 6 C5' A B 423 63.955 116.958 15.870 1.00 44.42 C
ATOM 7 C4' A B 423 62.640 116.782 15.136 1.00 45.52 C
ATOM 8 O4' A B 423 62.786 115.760 14.117 1.00 45.63 O
ATOM 9 C3' A B 423 61.487 116.317 16.012 1.00 46.29 C
ATOM 10 O3' A B 423 60.801 117.449 16.537 1.00 49.85 O
ATOM 11 C2' A B 423 60.612 115.530 15.044 1.00 46.18 C
ATOM 12 O2' A B 423 59.771 116.358 14.272 1.00 45.75 O
ATOM 13 C1' A B 423 61.661 114.900 14.129 1.00 44.19 C
ATOM 14 N9 A B 423 62.123 113.576 14.539 1.00 44.64 N
ATOM 15 C8 A B 423 63.348 113.250 15.079 1.00 45.34 C
ATOM 16 N7 A B 423 63.509 111.967 15.292 1.00 45.91 N
ATOM 17 C5 A B 423 62.306 111.411 14.880 1.00 45.45 C
ATOM 18 C6 A B 423 61.854 110.089 14.833 1.00 46.08 C
ATOM 19 N6 A B 423 62.592 109.046 15.211 1.00 46.75 N
ATOM 20 N1 A B 423 60.603 109.870 14.372 1.00 46.64 N
ATOM 21 C2 A B 423 59.870 110.922 13.982 1.00 45.79 C
ATOM 22 N3 A B 423 60.190 112.212 13.971 1.00 44.75 N
ATOM 23 C4 A B 423 61.437 112.392 14.433 1.00 44.44 C
ATOM 24 P A B 424 60.028 117.341 17.934 1.00 50.57 P
ATOM 25 OP1 A B 424 59.216 118.570 18.092 1.00 51.81 O
ATOM 26 OP2 A B 424 61.024 116.978 18.973 1.00 52.74 O
ATOM 27 O5' A B 424 59.046 116.108 17.726 1.00 50.85 O
TER
ATOM 2 P A A 424 60.028 117.341 17.934 1.00 50.57 P
ATOM 3 OP1 A A 424 59.216 118.570 18.092 1.00 51.81 O
ATOM 4 OP2 A A 424 61.024 116.978 18.973 1.00 52.74 O
ATOM 5 O5' A A 424 59.046 116.108 17.726 1.00 50.85 O
ATOM 6 C5' A A 424 57.861 116.222 16.926 1.00 48.60 C
ATOM 7 C4' A A 424 57.055 114.959 17.045 1.00 48.83 C
ATOM 8 O4' A A 424 57.803 113.868 16.456 1.00 47.10 O
ATOM 9 C3' A A 424 56.799 114.525 18.481 1.00 48.61 C
ATOM 10 O3' A A 424 55.640 115.181 18.983 1.00 50.39 O
ATOM 11 C2' A A 424 56.630 113.018 18.351 1.00 47.07 C
ATOM 12 O2' A A 424 55.332 112.671 17.916 1.00 46.10 O
ATOM 13 C1' A A 424 57.628 112.695 17.232 1.00 45.90 C
ATOM 14 N9 A A 424 58.955 112.246 17.646 1.00 45.21 N
ATOM 15 C8 A A 424 60.042 113.023 17.954 1.00 44.78 C
ATOM 16 N7 A A 424 61.128 112.335 18.207 1.00 44.98 N
ATOM 17 C5 A A 424 60.725 111.014 18.077 1.00 44.16 C
ATOM 18 C6 A A 424 61.417 109.794 18.207 1.00 43.71 C
ATOM 19 N6 A A 424 62.713 109.701 18.507 1.00 42.85 N
ATOM 20 N1 A A 424 60.721 108.656 18.014 1.00 44.23 N
ATOM 21 C2 A A 424 59.419 108.747 17.716 1.00 46.11 C
ATOM 22 N3 A A 424 58.660 109.832 17.565 1.00 45.17 N
ATOM 23 C4 A A 424 59.382 110.945 17.755 1.00 44.69 C
ATOM 24 P A A 425 55.552 115.575 20.537 1.00 53.58 P
ATOM 25 OP1 A A 425 54.407 116.504 20.695 1.00 52.31 O
ATOM 26 OP2 A A 425 56.895 115.973 21.026 1.00 53.97 O
ATOM 27 O5' A A 425 55.170 114.209 21.254 1.00 54.88 O
TER
ATOM 1 O3' U B 422 66.802 115.849 15.986 1.00 45.58 O
ATOM 2 P A B 423 65.774 115.540 17.179 1.00 44.57 P
ATOM 3 OP1 A B 423 65.904 116.601 18.203 1.00 45.76 O
ATOM 4 OP2 A B 423 65.975 114.125 17.567 1.00 44.66 O
ATOM 5 O5' A B 423 64.341 115.715 16.506 1.00 45.05 O
ATOM 6 C5' A B 423 63.955 116.958 15.870 1.00 44.42 C
ATOM 7 C4' A B 423 62.640 116.782 15.136 1.00 45.52 C
ATOM 8 O4' A B 423 62.786 115.760 14.117 1.00 45.63 O
ATOM 9 C3' A B 423 61.487 116.317 16.012 1.00 46.29 C
ATOM 10 O3' A B 423 60.801 117.449 16.537 1.00 49.85 O
ATOM 11 C2' A B 423 60.612 115.530 15.044 1.00 46.18 C
ATOM 12 O2' A B 423 59.771 116.358 14.272 1.00 45.75 O
ATOM 13 C1' A B 423 61.661 114.900 14.129 1.00 44.19 C
ATOM 14 N9 A B 423 62.123 113.576 14.539 1.00 44.64 N
ATOM 15 C8 A B 423 63.348 113.250 15.079 1.00 45.34 C
ATOM 16 N7 A B 423 63.509 111.967 15.292 1.00 45.91 N
ATOM 17 C5 A B 423 62.306 111.411 14.880 1.00 45.45 C
ATOM 18 C6 A B 423 61.854 110.089 14.833 1.00 46.08 C
ATOM 19 N6 A B 423 62.592 109.046 15.211 1.00 46.75 N
ATOM 20 N1 A B 423 60.603 109.870 14.372 1.00 46.64 N
ATOM 21 C2 A B 423 59.870 110.922 13.982 1.00 45.79 C
ATOM 22 N3 A B 423 60.190 112.212 13.971 1.00 44.75 N
ATOM 23 C4 A B 423 61.437 112.392 14.433 1.00 44.44 C
ATOM 24 P A B 424 60.028 117.341 17.934 1.00 50.57 P
ATOM 25 OP1 A B 424 59.216 118.570 18.092 1.00 51.81 O
ATOM 26 OP2 A B 424 61.024 116.978 18.973 1.00 52.74 O
ATOM 27 O5' A B 424 59.046 116.108 17.726 1.00 50.85 O
TER
Atoms:
OP1: (59.216,118.570,18.092)
OP2: (61.024,116.978,18.973)
C3': (56.799,114.525,18.481)
C1': (57.628,112.695,17.232)
C5': (57.861,116.222,16.926)
O4': (57.803,113.868,16.456)
C8: (60.042,113.023,17.954)
O2': (55.332,112.671,17.916)
C6: (61.417,109.794,18.207)
C5: (60.725,111.014,18.077)
C4: (59.382,110.945,17.755)
P: (60.028,117.341,17.934)
C4': (57.055,114.959,17.045)
C2': (56.630,113.018,18.351)
C2: (59.419,108.747,17.716)
N1: (60.721,108.656,18.014)
N3: (58.660,109.832,17.565)
N6: (62.713,109.701,18.507)
N7: (61.128,112.335,18.207)
N9: (58.955,112.246,17.646)
O5': (59.046,116.108,17.726)
O3': (55.640,115.181,18.983)
OP2: (61.024,116.978,18.973)
C3': (56.799,114.525,18.481)
C1': (57.628,112.695,17.232)
C5': (57.861,116.222,16.926)
O4': (57.803,113.868,16.456)
C8: (60.042,113.023,17.954)
O2': (55.332,112.671,17.916)
C6: (61.417,109.794,18.207)
C5: (60.725,111.014,18.077)
C4: (59.382,110.945,17.755)
P: (60.028,117.341,17.934)
C4': (57.055,114.959,17.045)
C2': (56.630,113.018,18.351)
C2: (59.419,108.747,17.716)
N1: (60.721,108.656,18.014)
N3: (58.660,109.832,17.565)
N6: (62.713,109.701,18.507)
N7: (61.128,112.335,18.207)
N9: (58.955,112.246,17.646)
O5': (59.046,116.108,17.726)
O3': (55.640,115.181,18.983)
OP1: (65.904,116.601,18.203)
OP2: (65.975,114.125,17.567)
C3': (61.487,116.317,16.012)
C1': (61.661,114.900,14.129)
C5': (63.955,116.958,15.870)
O4': (62.786,115.760,14.117)
C8: (63.348,113.250,15.079)
O2': (59.771,116.358,14.272)
C6: (61.854,110.089,14.833)
C5: (62.306,111.411,14.880)
C4: (61.437,112.392,14.433)
P: (65.774,115.540,17.179)
C4': (62.640,116.782,15.136)
C2': (60.612,115.530,15.044)
C2: (59.870,110.922,13.982)
N1: (60.603,109.870,14.372)
N3: (60.190,112.212,13.971)
N6: (62.592,109.046,15.211)
N7: (63.509,111.967,15.292)
N9: (62.123,113.576,14.539)
O5': (64.341,115.715,16.506)
O3': (60.801,117.449,16.537)
OP2: (65.975,114.125,17.567)
C3': (61.487,116.317,16.012)
C1': (61.661,114.900,14.129)
C5': (63.955,116.958,15.870)
O4': (62.786,115.760,14.117)
C8: (63.348,113.250,15.079)
O2': (59.771,116.358,14.272)
C6: (61.854,110.089,14.833)
C5: (62.306,111.411,14.880)
C4: (61.437,112.392,14.433)
P: (65.774,115.540,17.179)
C4': (62.640,116.782,15.136)
C2': (60.612,115.530,15.044)
C2: (59.870,110.922,13.982)
N1: (60.603,109.870,14.372)
N3: (60.190,112.212,13.971)
N6: (62.592,109.046,15.211)
N7: (63.509,111.967,15.292)
N9: (62.123,113.576,14.539)
O5': (64.341,115.715,16.506)
O3': (60.801,117.449,16.537)
Image (generated by PyMOL):