Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:C20:C19
Extra
PDB:
ATOM 1 O3' A A 19 17.569 -0.578 25.675 1.00 15.45 O
ATOM 2 P A A 20 18.396 -1.480 26.719 1.00 15.64 P
ATOM 3 OP1 A A 20 18.233 -0.887 28.074 1.00 15.75 O
ATOM 4 OP2 A A 20 19.763 -1.737 26.181 1.00 16.73 O
ATOM 5 O5' A A 20 17.617 -2.861 26.751 1.00 16.27 O
ATOM 6 C5' A A 20 16.400 -2.990 27.461 1.00 14.75 C
ATOM 7 C4' A A 20 15.871 -4.380 27.284 1.00 14.63 C
ATOM 8 O4' A A 20 15.712 -4.615 25.861 1.00 12.82 O
ATOM 9 C3' A A 20 16.831 -5.474 27.709 1.00 16.15 C
ATOM 10 O3' A A 20 16.732 -5.718 29.106 1.00 19.41 O
ATOM 11 C2' A A 20 16.327 -6.657 26.895 1.00 15.51 C
ATOM 12 O2' A A 20 15.168 -7.230 27.448 1.00 18.35 O
ATOM 13 C1' A A 20 15.983 -5.978 25.568 1.00 13.93 C
ATOM 14 N9 A A 20 17.079 -6.042 24.599 1.00 12.86 N
ATOM 15 C8 A A 20 17.951 -5.049 24.222 1.00 12.67 C
ATOM 16 N7 A A 20 18.852 -5.437 23.350 1.00 12.09 N
ATOM 17 C5 A A 20 18.547 -6.773 23.130 1.00 11.65 C
ATOM 18 C6 A A 20 19.134 -7.750 22.317 1.00 10.93 C
ATOM 19 N6 A A 20 20.192 -7.522 21.541 1.00 11.26 N
ATOM 20 N1 A A 20 18.593 -8.985 22.328 1.00 9.13 N
ATOM 21 C2 A A 20 17.526 -9.213 23.112 1.00 10.35 C
ATOM 22 N3 A A 20 16.885 -8.379 23.924 1.00 10.29 N
ATOM 23 C4 A A 20 17.453 -7.158 23.887 1.00 11.46 C
ATOM 24 P C A 21 18.058 -6.006 29.969 1.00 19.66 P
ATOM 25 OP1 C A 21 17.638 -6.118 31.382 1.00 21.83 O
ATOM 26 OP2 C A 21 19.090 -5.020 29.583 1.00 22.09 O
ATOM 27 O5' C A 21 18.526 -7.443 29.496 1.00 19.40 O
TER
ATOM 1 O3' G B 18 20.973 -2.323 21.513 1.00 16.83 O
ATOM 2 P A B 19 20.860 -0.740 21.598 1.00 17.02 P
ATOM 3 OP1 A B 19 20.995 -0.151 20.242 1.00 15.96 O
ATOM 4 OP2 A B 19 21.761 -0.297 22.692 1.00 17.91 O
ATOM 5 O5' A B 19 19.340 -0.588 22.038 1.00 17.27 O
ATOM 6 C5' A B 19 18.896 0.459 22.880 1.00 15.77 C
ATOM 7 C4' A B 19 17.503 0.152 23.362 1.00 14.59 C
ATOM 8 O4' A B 19 16.737 -0.271 22.202 1.00 15.28 O
ATOM 9 C3' A B 19 17.393 -1.019 24.328 1.00 14.96 C
ATOM 10 O3' A B 19 17.569 -0.578 25.675 1.00 15.45 O
ATOM 11 C2' A B 19 15.972 -1.508 24.077 1.00 15.12 C
ATOM 12 O2' A B 19 14.995 -0.737 24.743 1.00 17.89 O
ATOM 13 C1' A B 19 15.843 -1.309 22.564 1.00 14.85 C
ATOM 14 N9 A B 19 16.200 -2.502 21.798 1.00 12.89 N
ATOM 15 C8 A B 19 17.203 -2.655 20.865 1.00 14.25 C
ATOM 16 N7 A B 19 17.300 -3.873 20.388 1.00 13.52 N
ATOM 17 C5 A B 19 16.288 -4.565 21.037 1.00 12.47 C
ATOM 18 C6 A B 19 15.867 -5.906 20.977 1.00 13.36 C
ATOM 19 N6 A B 19 16.440 -6.828 20.196 1.00 14.56 N
ATOM 20 N1 A B 19 14.823 -6.276 21.761 1.00 12.10 N
ATOM 21 C2 A B 19 14.251 -5.352 22.547 1.00 10.28 C
ATOM 22 N3 A B 19 14.554 -4.063 22.690 1.00 10.22 N
ATOM 23 C4 A B 19 15.595 -3.730 21.900 1.00 12.08 C
ATOM 24 P A B 20 18.396 -1.480 26.719 1.00 15.64 P
ATOM 25 OP1 A B 20 18.233 -0.887 28.074 1.00 15.75 O
ATOM 26 OP2 A B 20 19.763 -1.737 26.181 1.00 16.73 O
ATOM 27 O5' A B 20 17.617 -2.861 26.751 1.00 16.27 O
TER
ATOM 2 P A A 20 18.396 -1.480 26.719 1.00 15.64 P
ATOM 3 OP1 A A 20 18.233 -0.887 28.074 1.00 15.75 O
ATOM 4 OP2 A A 20 19.763 -1.737 26.181 1.00 16.73 O
ATOM 5 O5' A A 20 17.617 -2.861 26.751 1.00 16.27 O
ATOM 6 C5' A A 20 16.400 -2.990 27.461 1.00 14.75 C
ATOM 7 C4' A A 20 15.871 -4.380 27.284 1.00 14.63 C
ATOM 8 O4' A A 20 15.712 -4.615 25.861 1.00 12.82 O
ATOM 9 C3' A A 20 16.831 -5.474 27.709 1.00 16.15 C
ATOM 10 O3' A A 20 16.732 -5.718 29.106 1.00 19.41 O
ATOM 11 C2' A A 20 16.327 -6.657 26.895 1.00 15.51 C
ATOM 12 O2' A A 20 15.168 -7.230 27.448 1.00 18.35 O
ATOM 13 C1' A A 20 15.983 -5.978 25.568 1.00 13.93 C
ATOM 14 N9 A A 20 17.079 -6.042 24.599 1.00 12.86 N
ATOM 15 C8 A A 20 17.951 -5.049 24.222 1.00 12.67 C
ATOM 16 N7 A A 20 18.852 -5.437 23.350 1.00 12.09 N
ATOM 17 C5 A A 20 18.547 -6.773 23.130 1.00 11.65 C
ATOM 18 C6 A A 20 19.134 -7.750 22.317 1.00 10.93 C
ATOM 19 N6 A A 20 20.192 -7.522 21.541 1.00 11.26 N
ATOM 20 N1 A A 20 18.593 -8.985 22.328 1.00 9.13 N
ATOM 21 C2 A A 20 17.526 -9.213 23.112 1.00 10.35 C
ATOM 22 N3 A A 20 16.885 -8.379 23.924 1.00 10.29 N
ATOM 23 C4 A A 20 17.453 -7.158 23.887 1.00 11.46 C
ATOM 24 P C A 21 18.058 -6.006 29.969 1.00 19.66 P
ATOM 25 OP1 C A 21 17.638 -6.118 31.382 1.00 21.83 O
ATOM 26 OP2 C A 21 19.090 -5.020 29.583 1.00 22.09 O
ATOM 27 O5' C A 21 18.526 -7.443 29.496 1.00 19.40 O
TER
ATOM 1 O3' G B 18 20.973 -2.323 21.513 1.00 16.83 O
ATOM 2 P A B 19 20.860 -0.740 21.598 1.00 17.02 P
ATOM 3 OP1 A B 19 20.995 -0.151 20.242 1.00 15.96 O
ATOM 4 OP2 A B 19 21.761 -0.297 22.692 1.00 17.91 O
ATOM 5 O5' A B 19 19.340 -0.588 22.038 1.00 17.27 O
ATOM 6 C5' A B 19 18.896 0.459 22.880 1.00 15.77 C
ATOM 7 C4' A B 19 17.503 0.152 23.362 1.00 14.59 C
ATOM 8 O4' A B 19 16.737 -0.271 22.202 1.00 15.28 O
ATOM 9 C3' A B 19 17.393 -1.019 24.328 1.00 14.96 C
ATOM 10 O3' A B 19 17.569 -0.578 25.675 1.00 15.45 O
ATOM 11 C2' A B 19 15.972 -1.508 24.077 1.00 15.12 C
ATOM 12 O2' A B 19 14.995 -0.737 24.743 1.00 17.89 O
ATOM 13 C1' A B 19 15.843 -1.309 22.564 1.00 14.85 C
ATOM 14 N9 A B 19 16.200 -2.502 21.798 1.00 12.89 N
ATOM 15 C8 A B 19 17.203 -2.655 20.865 1.00 14.25 C
ATOM 16 N7 A B 19 17.300 -3.873 20.388 1.00 13.52 N
ATOM 17 C5 A B 19 16.288 -4.565 21.037 1.00 12.47 C
ATOM 18 C6 A B 19 15.867 -5.906 20.977 1.00 13.36 C
ATOM 19 N6 A B 19 16.440 -6.828 20.196 1.00 14.56 N
ATOM 20 N1 A B 19 14.823 -6.276 21.761 1.00 12.10 N
ATOM 21 C2 A B 19 14.251 -5.352 22.547 1.00 10.28 C
ATOM 22 N3 A B 19 14.554 -4.063 22.690 1.00 10.22 N
ATOM 23 C4 A B 19 15.595 -3.730 21.900 1.00 12.08 C
ATOM 24 P A B 20 18.396 -1.480 26.719 1.00 15.64 P
ATOM 25 OP1 A B 20 18.233 -0.887 28.074 1.00 15.75 O
ATOM 26 OP2 A B 20 19.763 -1.737 26.181 1.00 16.73 O
ATOM 27 O5' A B 20 17.617 -2.861 26.751 1.00 16.27 O
TER
Atoms:
OP1: (18.233,-0.887,28.074)
OP2: (19.763,-1.737,26.181)
C3': (16.831,-5.474,27.709)
C1': (15.983,-5.978,25.568)
C5': (16.400,-2.990,27.461)
O4': (15.712,-4.615,25.861)
C8: (17.951,-5.049,24.222)
O2': (15.168,-7.230,27.448)
C6: (19.134,-7.750,22.317)
C5: (18.547,-6.773,23.130)
C4: (17.453,-7.158,23.887)
P: (18.396,-1.480,26.719)
C4': (15.871,-4.380,27.284)
C2': (16.327,-6.657,26.895)
C2: (17.526,-9.213,23.112)
N1: (18.593,-8.985,22.328)
N3: (16.885,-8.379,23.924)
N6: (20.192,-7.522,21.541)
N7: (18.852,-5.437,23.350)
N9: (17.079,-6.042,24.599)
O5': (17.617,-2.861,26.751)
O3': (16.732,-5.718,29.106)
OP2: (19.763,-1.737,26.181)
C3': (16.831,-5.474,27.709)
C1': (15.983,-5.978,25.568)
C5': (16.400,-2.990,27.461)
O4': (15.712,-4.615,25.861)
C8: (17.951,-5.049,24.222)
O2': (15.168,-7.230,27.448)
C6: (19.134,-7.750,22.317)
C5: (18.547,-6.773,23.130)
C4: (17.453,-7.158,23.887)
P: (18.396,-1.480,26.719)
C4': (15.871,-4.380,27.284)
C2': (16.327,-6.657,26.895)
C2: (17.526,-9.213,23.112)
N1: (18.593,-8.985,22.328)
N3: (16.885,-8.379,23.924)
N6: (20.192,-7.522,21.541)
N7: (18.852,-5.437,23.350)
N9: (17.079,-6.042,24.599)
O5': (17.617,-2.861,26.751)
O3': (16.732,-5.718,29.106)
OP1: (20.995,-0.151,20.242)
OP2: (21.761,-0.297,22.692)
C3': (17.393,-1.019,24.328)
C1': (15.843,-1.309,22.564)
C5': (18.896,0.459,22.880)
O4': (16.737,-0.271,22.202)
C8: (17.203,-2.655,20.865)
O2': (14.995,-0.737,24.743)
C6: (15.867,-5.906,20.977)
C5: (16.288,-4.565,21.037)
C4: (15.595,-3.730,21.900)
P: (20.860,-0.740,21.598)
C4': (17.503,0.152,23.362)
C2': (15.972,-1.508,24.077)
C2: (14.251,-5.352,22.547)
N1: (14.823,-6.276,21.761)
N3: (14.554,-4.063,22.690)
N6: (16.440,-6.828,20.196)
N7: (17.300,-3.873,20.388)
N9: (16.200,-2.502,21.798)
O5': (19.340,-0.588,22.038)
O3': (17.569,-0.578,25.675)
OP2: (21.761,-0.297,22.692)
C3': (17.393,-1.019,24.328)
C1': (15.843,-1.309,22.564)
C5': (18.896,0.459,22.880)
O4': (16.737,-0.271,22.202)
C8: (17.203,-2.655,20.865)
O2': (14.995,-0.737,24.743)
C6: (15.867,-5.906,20.977)
C5: (16.288,-4.565,21.037)
C4: (15.595,-3.730,21.900)
P: (20.860,-0.740,21.598)
C4': (17.503,0.152,23.362)
C2': (15.972,-1.508,24.077)
C2: (14.251,-5.352,22.547)
N1: (14.823,-6.276,21.761)
N3: (14.554,-4.063,22.690)
N6: (16.440,-6.828,20.196)
N7: (17.300,-3.873,20.388)
N9: (16.200,-2.502,21.798)
O5': (19.340,-0.588,22.038)
O3': (17.569,-0.578,25.675)
Image (generated by PyMOL):