Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X64:X63
Extra
PDB:
ATOM 1 O3' U A 63 2.827 -12.985 2.011 1.00 47.61 O
ATOM 2 P G A 64 3.813 -13.618 0.916 1.00 46.96 P
ATOM 3 OP1 G A 64 2.983 -13.982 -0.256 1.00 46.01 O
ATOM 4 OP2 G A 64 4.688 -14.641 1.534 1.00 45.17 O
ATOM 5 O5' G A 64 4.701 -12.344 0.546 1.00 47.66 O
ATOM 6 C5' G A 64 4.178 -11.283 -0.244 1.00 49.43 C
ATOM 7 C4' G A 64 5.212 -10.178 -0.350 1.00 50.87 C
ATOM 8 O4' G A 64 5.589 -9.746 0.978 1.00 50.40 O
ATOM 9 C3' G A 64 6.545 -10.582 -0.972 1.00 51.83 C
ATOM 10 O3' G A 64 6.469 -10.611 -2.384 1.00 53.72 O
ATOM 11 C2' G A 64 7.448 -9.464 -0.465 1.00 51.72 C
ATOM 12 O2' G A 64 7.286 -8.251 -1.177 1.00 51.95 O
ATOM 13 C1' G A 64 6.954 -9.346 0.976 1.00 50.37 C
ATOM 14 N9 G A 64 7.748 -10.217 1.833 1.00 49.92 N
ATOM 15 C8 G A 64 7.400 -11.451 2.347 1.00 49.68 C
ATOM 16 N7 G A 64 8.347 -11.996 3.061 1.00 49.77 N
ATOM 17 C5 G A 64 9.390 -11.069 3.007 1.00 49.97 C
ATOM 18 C6 G A 64 10.684 -11.096 3.586 1.00 49.81 C
ATOM 19 O6 G A 64 11.176 -11.980 4.293 1.00 50.02 O
ATOM 20 N1 G A 64 11.435 -9.961 3.288 1.00 49.33 N
ATOM 21 C2 G A 64 10.991 -8.919 2.510 1.00 49.49 C
ATOM 22 N2 G A 64 11.843 -7.904 2.315 1.00 49.43 N
ATOM 23 N3 G A 64 9.779 -8.874 1.965 1.00 49.67 N
ATOM 24 C4 G A 64 9.035 -9.973 2.254 1.00 49.87 C
ATOM 25 P G A 65 7.433 -11.580 -3.218 1.00 56.54 P
ATOM 26 OP1 G A 65 6.992 -11.542 -4.639 1.00 55.81 O
ATOM 27 OP2 G A 65 7.522 -12.883 -2.507 1.00 55.55 O
ATOM 28 O5' G A 65 8.843 -10.825 -3.107 1.00 55.59 O
TER
ATOM 1 O3' A B 62 2.633 -16.007 7.205 1.00 49.68 O
ATOM 2 P U B 63 3.134 -16.230 5.696 1.00 49.51 P
ATOM 3 OP1 U B 63 2.109 -17.053 5.017 1.00 50.11 O
ATOM 4 OP2 U B 63 4.542 -16.677 5.716 1.00 50.53 O
ATOM 5 O5' U B 63 3.110 -14.772 5.076 1.00 48.62 O
ATOM 6 C5' U B 63 1.895 -14.131 4.782 1.00 48.12 C
ATOM 7 C4' U B 63 2.213 -12.719 4.352 1.00 48.22 C
ATOM 8 O4' U B 63 2.789 -11.988 5.469 1.00 48.34 O
ATOM 9 C3' U B 63 3.297 -12.607 3.293 1.00 48.35 C
ATOM 10 O3' U B 63 2.827 -12.985 2.011 1.00 47.61 O
ATOM 11 C2' U B 63 3.637 -11.129 3.450 1.00 48.87 C
ATOM 12 O2' U B 63 2.612 -10.270 3.002 1.00 49.35 O
ATOM 13 C1' U B 63 3.758 -11.079 4.972 1.00 49.04 C
ATOM 14 N1 U B 63 5.158 -11.414 5.474 1.00 49.60 N
ATOM 15 C2 U B 63 6.009 -10.358 5.728 1.00 49.07 C
ATOM 16 O2 U B 63 5.679 -9.198 5.569 1.00 49.08 O
ATOM 17 N3 U B 63 7.263 -10.708 6.174 1.00 49.02 N
ATOM 18 C4 U B 63 7.746 -11.995 6.378 1.00 49.54 C
ATOM 19 O4 U B 63 8.894 -12.150 6.783 1.00 49.61 O
ATOM 20 C5 U B 63 6.807 -13.056 6.096 1.00 48.83 C
ATOM 21 C6 U B 63 5.579 -12.730 5.660 1.00 48.67 C
ATOM 22 P G B 64 3.813 -13.618 0.916 1.00 46.96 P
ATOM 23 OP1 G B 64 2.983 -13.982 -0.256 1.00 46.01 O
ATOM 24 OP2 G B 64 4.688 -14.641 1.534 1.00 45.17 O
ATOM 25 O5' G B 64 4.701 -12.344 0.546 1.00 47.66 O
TER
ATOM 2 P G A 64 3.813 -13.618 0.916 1.00 46.96 P
ATOM 3 OP1 G A 64 2.983 -13.982 -0.256 1.00 46.01 O
ATOM 4 OP2 G A 64 4.688 -14.641 1.534 1.00 45.17 O
ATOM 5 O5' G A 64 4.701 -12.344 0.546 1.00 47.66 O
ATOM 6 C5' G A 64 4.178 -11.283 -0.244 1.00 49.43 C
ATOM 7 C4' G A 64 5.212 -10.178 -0.350 1.00 50.87 C
ATOM 8 O4' G A 64 5.589 -9.746 0.978 1.00 50.40 O
ATOM 9 C3' G A 64 6.545 -10.582 -0.972 1.00 51.83 C
ATOM 10 O3' G A 64 6.469 -10.611 -2.384 1.00 53.72 O
ATOM 11 C2' G A 64 7.448 -9.464 -0.465 1.00 51.72 C
ATOM 12 O2' G A 64 7.286 -8.251 -1.177 1.00 51.95 O
ATOM 13 C1' G A 64 6.954 -9.346 0.976 1.00 50.37 C
ATOM 14 N9 G A 64 7.748 -10.217 1.833 1.00 49.92 N
ATOM 15 C8 G A 64 7.400 -11.451 2.347 1.00 49.68 C
ATOM 16 N7 G A 64 8.347 -11.996 3.061 1.00 49.77 N
ATOM 17 C5 G A 64 9.390 -11.069 3.007 1.00 49.97 C
ATOM 18 C6 G A 64 10.684 -11.096 3.586 1.00 49.81 C
ATOM 19 O6 G A 64 11.176 -11.980 4.293 1.00 50.02 O
ATOM 20 N1 G A 64 11.435 -9.961 3.288 1.00 49.33 N
ATOM 21 C2 G A 64 10.991 -8.919 2.510 1.00 49.49 C
ATOM 22 N2 G A 64 11.843 -7.904 2.315 1.00 49.43 N
ATOM 23 N3 G A 64 9.779 -8.874 1.965 1.00 49.67 N
ATOM 24 C4 G A 64 9.035 -9.973 2.254 1.00 49.87 C
ATOM 25 P G A 65 7.433 -11.580 -3.218 1.00 56.54 P
ATOM 26 OP1 G A 65 6.992 -11.542 -4.639 1.00 55.81 O
ATOM 27 OP2 G A 65 7.522 -12.883 -2.507 1.00 55.55 O
ATOM 28 O5' G A 65 8.843 -10.825 -3.107 1.00 55.59 O
TER
ATOM 1 O3' A B 62 2.633 -16.007 7.205 1.00 49.68 O
ATOM 2 P U B 63 3.134 -16.230 5.696 1.00 49.51 P
ATOM 3 OP1 U B 63 2.109 -17.053 5.017 1.00 50.11 O
ATOM 4 OP2 U B 63 4.542 -16.677 5.716 1.00 50.53 O
ATOM 5 O5' U B 63 3.110 -14.772 5.076 1.00 48.62 O
ATOM 6 C5' U B 63 1.895 -14.131 4.782 1.00 48.12 C
ATOM 7 C4' U B 63 2.213 -12.719 4.352 1.00 48.22 C
ATOM 8 O4' U B 63 2.789 -11.988 5.469 1.00 48.34 O
ATOM 9 C3' U B 63 3.297 -12.607 3.293 1.00 48.35 C
ATOM 10 O3' U B 63 2.827 -12.985 2.011 1.00 47.61 O
ATOM 11 C2' U B 63 3.637 -11.129 3.450 1.00 48.87 C
ATOM 12 O2' U B 63 2.612 -10.270 3.002 1.00 49.35 O
ATOM 13 C1' U B 63 3.758 -11.079 4.972 1.00 49.04 C
ATOM 14 N1 U B 63 5.158 -11.414 5.474 1.00 49.60 N
ATOM 15 C2 U B 63 6.009 -10.358 5.728 1.00 49.07 C
ATOM 16 O2 U B 63 5.679 -9.198 5.569 1.00 49.08 O
ATOM 17 N3 U B 63 7.263 -10.708 6.174 1.00 49.02 N
ATOM 18 C4 U B 63 7.746 -11.995 6.378 1.00 49.54 C
ATOM 19 O4 U B 63 8.894 -12.150 6.783 1.00 49.61 O
ATOM 20 C5 U B 63 6.807 -13.056 6.096 1.00 48.83 C
ATOM 21 C6 U B 63 5.579 -12.730 5.660 1.00 48.67 C
ATOM 22 P G B 64 3.813 -13.618 0.916 1.00 46.96 P
ATOM 23 OP1 G B 64 2.983 -13.982 -0.256 1.00 46.01 O
ATOM 24 OP2 G B 64 4.688 -14.641 1.534 1.00 45.17 O
ATOM 25 O5' G B 64 4.701 -12.344 0.546 1.00 47.66 O
TER
Atoms:
OP1: (2.983,-13.982,-0.256)
OP2: (4.688,-14.641,1.534)
C3': (6.545,-10.582,-0.972)
C1': (6.954,-9.346,0.976)
C5': (4.178,-11.283,-0.244)
O6: (11.176,-11.980,4.293)
O4': (5.589,-9.746,0.978)
C8: (7.400,-11.451,2.347)
C2: (10.991,-8.919,2.510)
C6: (10.684,-11.096,3.586)
C5: (9.390,-11.069,3.007)
C4: (9.035,-9.973,2.254)
P: (3.813,-13.618,0.916)
C4': (5.212,-10.178,-0.350)
C2': (7.448,-9.464,-0.465)
O2': (7.286,-8.251,-1.177)
N1: (11.435,-9.961,3.288)
N2: (11.843,-7.904,2.315)
N3: (9.779,-8.874,1.965)
N7: (8.347,-11.996,3.061)
N9: (7.748,-10.217,1.833)
O5': (4.701,-12.344,0.546)
O3': (6.469,-10.611,-2.384)
OP2: (4.688,-14.641,1.534)
C3': (6.545,-10.582,-0.972)
C1': (6.954,-9.346,0.976)
C5': (4.178,-11.283,-0.244)
O6: (11.176,-11.980,4.293)
O4': (5.589,-9.746,0.978)
C8: (7.400,-11.451,2.347)
C2: (10.991,-8.919,2.510)
C6: (10.684,-11.096,3.586)
C5: (9.390,-11.069,3.007)
C4: (9.035,-9.973,2.254)
P: (3.813,-13.618,0.916)
C4': (5.212,-10.178,-0.350)
C2': (7.448,-9.464,-0.465)
O2': (7.286,-8.251,-1.177)
N1: (11.435,-9.961,3.288)
N2: (11.843,-7.904,2.315)
N3: (9.779,-8.874,1.965)
N7: (8.347,-11.996,3.061)
N9: (7.748,-10.217,1.833)
O5': (4.701,-12.344,0.546)
O3': (6.469,-10.611,-2.384)
C4: (7.746,-11.995,6.378)
N3: (7.263,-10.708,6.174)
OP1: (2.109,-17.053,5.017)
OP2: (4.542,-16.677,5.716)
C2: (6.009,-10.358,5.728)
C1': (3.758,-11.079,4.972)
C3': (3.297,-12.607,3.293)
O5': (3.110,-14.772,5.076)
O4': (2.789,-11.988,5.469)
C5': (1.895,-14.131,4.782)
P: (3.134,-16.230,5.696)
C4': (2.213,-12.719,4.352)
C2': (3.637,-11.129,3.450)
O2': (2.612,-10.270,3.002)
N1: (5.158,-11.414,5.474)
O4: (8.894,-12.150,6.783)
O2: (5.679,-9.198,5.569)
C6: (5.579,-12.730,5.660)
C5: (6.807,-13.056,6.096)
O3': (2.827,-12.985,2.011)
N3: (7.263,-10.708,6.174)
OP1: (2.109,-17.053,5.017)
OP2: (4.542,-16.677,5.716)
C2: (6.009,-10.358,5.728)
C1': (3.758,-11.079,4.972)
C3': (3.297,-12.607,3.293)
O5': (3.110,-14.772,5.076)
O4': (2.789,-11.988,5.469)
C5': (1.895,-14.131,4.782)
P: (3.134,-16.230,5.696)
C4': (2.213,-12.719,4.352)
C2': (3.637,-11.129,3.450)
O2': (2.612,-10.270,3.002)
N1: (5.158,-11.414,5.474)
O4: (8.894,-12.150,6.783)
O2: (5.679,-9.198,5.569)
C6: (5.579,-12.730,5.660)
C5: (6.807,-13.056,6.096)
O3': (2.827,-12.985,2.011)
Image (generated by PyMOL):