ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01207:01205

Extra

PDB:
ATOM 1 O3' A A1206 25.542 104.090 129.888 1.00 40.72 O
ATOM 2 P A A1207 25.969 102.625 129.397 1.00 42.34 P
ATOM 3 OP1 A A1207 26.327 102.771 127.965 1.00 39.99 O
ATOM 4 OP2 A A1207 24.932 101.644 129.795 1.00 42.84 O
ATOM 5 O5' A A1207 27.291 102.312 130.228 1.00 42.66 O
ATOM 6 C5' A A1207 28.548 102.911 129.861 1.00 45.92 C
ATOM 7 C4' A A1207 29.675 102.269 130.627 1.00 45.54 C
ATOM 8 O4' A A1207 29.504 102.542 132.038 1.00 46.01 O
ATOM 9 C3' A A1207 29.734 100.755 130.530 1.00 45.37 C
ATOM 10 O3' A A1207 30.439 100.359 129.362 1.00 45.93 O
ATOM 11 C2' A A1207 30.449 100.370 131.816 1.00 44.67 C
ATOM 12 O2' A A1207 31.843 100.554 131.743 1.00 44.43 O
ATOM 13 C1' A A1207 29.887 101.406 132.792 1.00 46.14 C
ATOM 14 N9 A A1207 28.722 100.946 133.547 1.00 47.12 N
ATOM 15 C8 A A1207 27.396 101.241 133.332 1.00 46.29 C
ATOM 16 N7 A A1207 26.585 100.677 134.189 1.00 46.54 N
ATOM 17 C5 A A1207 27.430 99.957 135.025 1.00 48.17 C
ATOM 18 C6 A A1207 27.187 99.135 136.140 1.00 48.68 C
ATOM 19 N6 A A1207 25.970 98.877 136.622 1.00 47.96 N
ATOM 20 N1 A A1207 28.254 98.574 136.750 1.00 49.72 N
ATOM 21 C2 A A1207 29.476 98.823 136.264 1.00 48.82 C
ATOM 22 N3 A A1207 29.831 99.571 135.225 1.00 48.35 N
ATOM 23 C4 A A1207 28.748 100.116 134.641 1.00 47.76 C
ATOM 24 P U A1208 30.152 98.926 128.703 1.00 47.91 P
ATOM 25 OP1 U A1208 31.081 98.760 127.563 1.00 50.25 O
ATOM 26 OP2 U A1208 28.695 98.786 128.482 1.00 48.22 O
ATOM 27 O5' U A1208 30.543 97.891 129.845 1.00 48.03 O
TER

ATOM 1 O3' C B1204 21.603 101.089 138.533 1.00 54.44 O
ATOM 2 P A B1205 20.517 101.777 137.566 1.00 53.27 P
ATOM 3 OP1 A B1205 19.222 101.831 138.289 1.00 54.87 O
ATOM 4 OP2 A B1205 20.595 101.073 136.265 1.00 54.44 O
ATOM 5 O5' A B1205 21.012 103.278 137.367 1.00 50.91 O
ATOM 6 C5' A B1205 22.397 103.587 137.161 1.00 49.42 C
ATOM 7 C4' A B1205 22.610 104.229 135.800 1.00 49.81 C
ATOM 8 O4' A B1205 23.978 104.688 135.696 1.00 51.43 O
ATOM 9 C3' A B1205 22.440 103.329 134.584 1.00 48.46 C
ATOM 10 O3' A B1205 22.318 104.141 133.435 1.00 47.30 O
ATOM 11 C2' A B1205 23.789 102.632 134.517 1.00 49.84 C
ATOM 12 O2' A B1205 24.131 102.190 133.222 1.00 50.06 O
ATOM 13 C1' A B1205 24.739 103.742 134.973 1.00 52.09 C
ATOM 14 N9 A B1205 25.762 103.227 135.878 1.00 56.73 N
ATOM 15 C8 A B1205 25.615 102.518 137.057 1.00 57.71 C
ATOM 16 N7 A B1205 26.753 102.181 137.616 1.00 56.85 N
ATOM 17 C5 A B1205 27.705 102.709 136.759 1.00 58.28 C
ATOM 18 C6 A B1205 29.094 102.701 136.789 1.00 58.96 C
ATOM 19 N6 A B1205 29.808 102.152 137.764 1.00 58.79 N
ATOM 20 N1 A B1205 29.741 103.299 135.768 1.00 62.14 N
ATOM 21 C2 A B1205 29.015 103.885 134.797 1.00 60.60 C
ATOM 22 N3 A B1205 27.706 103.975 134.670 1.00 55.82 N
ATOM 23 C4 A B1205 27.104 103.357 135.689 1.00 56.69 C
ATOM 24 P A B1206 20.910 104.276 132.689 1.00 48.08 P
ATOM 25 OP1 A B1206 20.206 105.429 133.327 1.00 47.26 O
ATOM 26 OP2 A B1206 20.249 102.946 132.629 1.00 45.63 O
ATOM 27 O5' A B1206 21.329 104.704 131.210 1.00 46.90 O
TER

Atoms:
OP1: (26.327,102.771,127.965)
OP2: (24.932,101.644,129.795)
C3': (29.734,100.755,130.530)
C1': (29.887,101.406,132.792)
C5': (28.548,102.911,129.861)
O4': (29.504,102.542,132.038)
C8: (27.396,101.241,133.332)
O2': (31.843,100.554,131.743)
C6: (27.187,99.135,136.140)
C5: (27.430,99.957,135.025)
C4: (28.748,100.116,134.641)
P: (25.969,102.625,129.397)
C4': (29.675,102.269,130.627)
C2': (30.449,100.370,131.816)
C2: (29.476,98.823,136.264)
N1: (28.254,98.574,136.750)
N3: (29.831,99.571,135.225)
N6: (25.970,98.877,136.622)
N7: (26.585,100.677,134.189)
N9: (28.722,100.946,133.547)
O5': (27.291,102.312,130.228)
O3': (30.439,100.359,129.362)
OP1: (19.222,101.831,138.289)
OP2: (20.595,101.073,136.265)
C3': (22.440,103.329,134.584)
C1': (24.739,103.742,134.973)
C5': (22.397,103.587,137.161)
O4': (23.978,104.688,135.696)
C8: (25.615,102.518,137.057)
O2': (24.131,102.190,133.222)
C6: (29.094,102.701,136.789)
C5: (27.705,102.709,136.759)
C4: (27.104,103.357,135.689)
P: (20.517,101.777,137.566)
C4': (22.610,104.229,135.800)
C2': (23.789,102.632,134.517)
C2: (29.015,103.885,134.797)
N1: (29.741,103.299,135.768)
N3: (27.706,103.975,134.670)
N6: (29.808,102.152,137.764)
N7: (26.753,102.181,137.616)
N9: (25.762,103.227,135.878)
O5': (21.012,103.278,137.367)
O3': (22.318,104.141,133.435)
Image (generated by PyMOL):
PyMOL image
show in jmol