Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2803:A2883
Extra
PDB:
ATOM 1 O3' A A2802 -36.007-109.992 -33.266 1.00 0.01 O
ATOM 2 P A A2803 -36.005-108.382 -33.395 1.00 0.45 P
ATOM 3 OP1 A A2803 -35.036-108.024 -34.472 1.00 0.45 O
ATOM 4 OP2 A A2803 -35.788-107.822 -32.014 1.00 0.45 O
ATOM 5 O5' A A2803 -37.496-108.073 -33.890 1.00 0.45 O
ATOM 6 C5' A A2803 -37.939-108.511 -35.170 1.00 0.45 C
ATOM 7 C4' A A2803 -39.402-108.233 -35.373 1.00 0.45 C
ATOM 8 O4' A A2803 -40.178-108.996 -34.425 1.00 0.45 O
ATOM 9 C3' A A2803 -39.834-106.802 -35.134 1.00 0.45 C
ATOM 10 O3' A A2803 -39.609-105.971 -36.242 1.00 0.45 O
ATOM 11 C2' A A2803 -41.300-106.948 -34.795 1.00 0.45 C
ATOM 12 O2' A A2803 -42.077-107.107 -35.965 1.00 0.45 O
ATOM 13 C1' A A2803 -41.302-108.253 -34.020 1.00 0.45 C
ATOM 14 N9 A A2803 -41.219-108.017 -32.579 1.00 0.42 N
ATOM 15 C8 A A2803 -40.140-107.682 -31.795 1.00 0.42 C
ATOM 16 N7 A A2803 -40.453-107.526 -30.521 1.00 0.42 N
ATOM 17 C5 A A2803 -41.826-107.769 -30.495 1.00 0.42 C
ATOM 18 C6 A A2803 -42.778-107.770 -29.467 1.00 0.42 C
ATOM 19 N6 A A2803 -42.499-107.515 -28.198 1.00 0.42 N
ATOM 20 N1 A A2803 -44.058-108.039 -29.786 1.00 0.42 N
ATOM 21 C2 A A2803 -44.361-108.299 -31.065 1.00 0.42 C
ATOM 22 N3 A A2803 -43.561-108.328 -32.125 1.00 0.42 N
ATOM 23 C4 A A2803 -42.302-108.053 -31.762 1.00 0.42 C
ATOM 24 P G A2804 -38.881-104.564 -36.048 1.00 0.02 P
ATOM 25 OP1 G A2804 -39.345-103.674 -37.136 1.00 0.02 O
ATOM 26 OP2 G A2804 -37.436-104.849 -35.934 1.00 0.02 O
ATOM 27 O5' G A2804 -39.456-104.043 -34.658 1.00 0.02 O
TER
ATOM 1 O3' C B2882 -41.326-105.961 -18.890 1.00 7.55 O
ATOM 2 P G B2883 -42.202-107.211 -19.261 1.00 1.42 P
ATOM 3 OP1 G B2883 -43.510-107.029 -18.599 1.00 1.42 O
ATOM 4 OP2 G B2883 -41.393-108.419 -18.961 1.00 1.42 O
ATOM 5 O5' G B2883 -42.339-107.045 -20.829 1.00 1.42 O
ATOM 6 C5' G B2883 -43.532-106.579 -21.414 1.00 1.42 C
ATOM 7 C4' G B2883 -43.557-106.899 -22.878 1.00 1.42 C
ATOM 8 O4' G B2883 -42.337-106.438 -23.495 1.00 1.42 O
ATOM 9 C3' G B2883 -43.633-108.372 -23.228 1.00 1.42 C
ATOM 10 O3' G B2883 -44.967-108.850 -23.191 1.00 1.42 O
ATOM 11 C2' G B2883 -43.021-108.416 -24.616 1.00 1.42 C
ATOM 12 O2' G B2883 -43.992-108.093 -25.604 1.00 1.42 O
ATOM 13 C1' G B2883 -41.987-107.286 -24.556 1.00 1.42 C
ATOM 14 N9 G B2883 -40.616-107.772 -24.322 1.00 1.79 N
ATOM 15 C8 G B2883 -40.111-108.145 -23.107 1.00 1.79 C
ATOM 16 N7 G B2883 -38.862-108.504 -23.130 1.00 1.79 N
ATOM 17 C5 G B2883 -38.536-108.350 -24.446 1.00 1.79 C
ATOM 18 C6 G B2883 -37.291-108.610 -25.033 1.00 1.79 C
ATOM 19 O6 G B2883 -36.260-109.024 -24.452 1.00 1.79 O
ATOM 20 N1 G B2883 -37.347-108.323 -26.393 1.00 1.79 N
ATOM 21 C2 G B2883 -38.438-107.858 -27.064 1.00 1.79 C
ATOM 22 N2 G B2883 -38.235-107.657 -28.369 1.00 1.79 N
ATOM 23 N3 G B2883 -39.609-107.613 -26.515 1.00 1.79 N
ATOM 24 C4 G B2883 -39.583-107.884 -25.205 1.00 1.79 C
ATOM 25 P U B2884 -45.320-110.273 -22.555 1.00 0.01 P
ATOM 26 OP1 U B2884 -46.689-110.181 -22.036 1.00 0.01 O
ATOM 27 OP2 U B2884 -44.229-110.624 -21.610 1.00 0.01 O
ATOM 28 O5' U B2884 -45.266-111.241 -23.832 1.00 0.01 O
TER
ATOM 2 P A A2803 -36.005-108.382 -33.395 1.00 0.45 P
ATOM 3 OP1 A A2803 -35.036-108.024 -34.472 1.00 0.45 O
ATOM 4 OP2 A A2803 -35.788-107.822 -32.014 1.00 0.45 O
ATOM 5 O5' A A2803 -37.496-108.073 -33.890 1.00 0.45 O
ATOM 6 C5' A A2803 -37.939-108.511 -35.170 1.00 0.45 C
ATOM 7 C4' A A2803 -39.402-108.233 -35.373 1.00 0.45 C
ATOM 8 O4' A A2803 -40.178-108.996 -34.425 1.00 0.45 O
ATOM 9 C3' A A2803 -39.834-106.802 -35.134 1.00 0.45 C
ATOM 10 O3' A A2803 -39.609-105.971 -36.242 1.00 0.45 O
ATOM 11 C2' A A2803 -41.300-106.948 -34.795 1.00 0.45 C
ATOM 12 O2' A A2803 -42.077-107.107 -35.965 1.00 0.45 O
ATOM 13 C1' A A2803 -41.302-108.253 -34.020 1.00 0.45 C
ATOM 14 N9 A A2803 -41.219-108.017 -32.579 1.00 0.42 N
ATOM 15 C8 A A2803 -40.140-107.682 -31.795 1.00 0.42 C
ATOM 16 N7 A A2803 -40.453-107.526 -30.521 1.00 0.42 N
ATOM 17 C5 A A2803 -41.826-107.769 -30.495 1.00 0.42 C
ATOM 18 C6 A A2803 -42.778-107.770 -29.467 1.00 0.42 C
ATOM 19 N6 A A2803 -42.499-107.515 -28.198 1.00 0.42 N
ATOM 20 N1 A A2803 -44.058-108.039 -29.786 1.00 0.42 N
ATOM 21 C2 A A2803 -44.361-108.299 -31.065 1.00 0.42 C
ATOM 22 N3 A A2803 -43.561-108.328 -32.125 1.00 0.42 N
ATOM 23 C4 A A2803 -42.302-108.053 -31.762 1.00 0.42 C
ATOM 24 P G A2804 -38.881-104.564 -36.048 1.00 0.02 P
ATOM 25 OP1 G A2804 -39.345-103.674 -37.136 1.00 0.02 O
ATOM 26 OP2 G A2804 -37.436-104.849 -35.934 1.00 0.02 O
ATOM 27 O5' G A2804 -39.456-104.043 -34.658 1.00 0.02 O
TER
ATOM 1 O3' C B2882 -41.326-105.961 -18.890 1.00 7.55 O
ATOM 2 P G B2883 -42.202-107.211 -19.261 1.00 1.42 P
ATOM 3 OP1 G B2883 -43.510-107.029 -18.599 1.00 1.42 O
ATOM 4 OP2 G B2883 -41.393-108.419 -18.961 1.00 1.42 O
ATOM 5 O5' G B2883 -42.339-107.045 -20.829 1.00 1.42 O
ATOM 6 C5' G B2883 -43.532-106.579 -21.414 1.00 1.42 C
ATOM 7 C4' G B2883 -43.557-106.899 -22.878 1.00 1.42 C
ATOM 8 O4' G B2883 -42.337-106.438 -23.495 1.00 1.42 O
ATOM 9 C3' G B2883 -43.633-108.372 -23.228 1.00 1.42 C
ATOM 10 O3' G B2883 -44.967-108.850 -23.191 1.00 1.42 O
ATOM 11 C2' G B2883 -43.021-108.416 -24.616 1.00 1.42 C
ATOM 12 O2' G B2883 -43.992-108.093 -25.604 1.00 1.42 O
ATOM 13 C1' G B2883 -41.987-107.286 -24.556 1.00 1.42 C
ATOM 14 N9 G B2883 -40.616-107.772 -24.322 1.00 1.79 N
ATOM 15 C8 G B2883 -40.111-108.145 -23.107 1.00 1.79 C
ATOM 16 N7 G B2883 -38.862-108.504 -23.130 1.00 1.79 N
ATOM 17 C5 G B2883 -38.536-108.350 -24.446 1.00 1.79 C
ATOM 18 C6 G B2883 -37.291-108.610 -25.033 1.00 1.79 C
ATOM 19 O6 G B2883 -36.260-109.024 -24.452 1.00 1.79 O
ATOM 20 N1 G B2883 -37.347-108.323 -26.393 1.00 1.79 N
ATOM 21 C2 G B2883 -38.438-107.858 -27.064 1.00 1.79 C
ATOM 22 N2 G B2883 -38.235-107.657 -28.369 1.00 1.79 N
ATOM 23 N3 G B2883 -39.609-107.613 -26.515 1.00 1.79 N
ATOM 24 C4 G B2883 -39.583-107.884 -25.205 1.00 1.79 C
ATOM 25 P U B2884 -45.320-110.273 -22.555 1.00 0.01 P
ATOM 26 OP1 U B2884 -46.689-110.181 -22.036 1.00 0.01 O
ATOM 27 OP2 U B2884 -44.229-110.624 -21.610 1.00 0.01 O
ATOM 28 O5' U B2884 -45.266-111.241 -23.832 1.00 0.01 O
TER
Atoms:
OP1: (-35.036,-108.024,-34.472)
OP2: (-35.788,-107.822,-32.014)
C3': (-39.834,-106.802,-35.134)
C1': (-41.302,-108.253,-34.020)
C5': (-37.939,-108.511,-35.170)
O4': (-40.178,-108.996,-34.425)
C8: (-40.140,-107.682,-31.795)
O2': (-42.077,-107.107,-35.965)
C6: (-42.778,-107.770,-29.467)
C5: (-41.826,-107.769,-30.495)
C4: (-42.302,-108.053,-31.762)
P: (-36.005,-108.382,-33.395)
C4': (-39.402,-108.233,-35.373)
C2': (-41.300,-106.948,-34.795)
C2: (-44.361,-108.299,-31.065)
N1: (-44.058,-108.039,-29.786)
N3: (-43.561,-108.328,-32.125)
N6: (-42.499,-107.515,-28.198)
N7: (-40.453,-107.526,-30.521)
N9: (-41.219,-108.017,-32.579)
O5': (-37.496,-108.073,-33.890)
O3': (-39.609,-105.971,-36.242)
OP2: (-35.788,-107.822,-32.014)
C3': (-39.834,-106.802,-35.134)
C1': (-41.302,-108.253,-34.020)
C5': (-37.939,-108.511,-35.170)
O4': (-40.178,-108.996,-34.425)
C8: (-40.140,-107.682,-31.795)
O2': (-42.077,-107.107,-35.965)
C6: (-42.778,-107.770,-29.467)
C5: (-41.826,-107.769,-30.495)
C4: (-42.302,-108.053,-31.762)
P: (-36.005,-108.382,-33.395)
C4': (-39.402,-108.233,-35.373)
C2': (-41.300,-106.948,-34.795)
C2: (-44.361,-108.299,-31.065)
N1: (-44.058,-108.039,-29.786)
N3: (-43.561,-108.328,-32.125)
N6: (-42.499,-107.515,-28.198)
N7: (-40.453,-107.526,-30.521)
N9: (-41.219,-108.017,-32.579)
O5': (-37.496,-108.073,-33.890)
O3': (-39.609,-105.971,-36.242)
OP1: (-43.510,-107.029,-18.599)
OP2: (-41.393,-108.419,-18.961)
C3': (-43.633,-108.372,-23.228)
C1': (-41.987,-107.286,-24.556)
C5': (-43.532,-106.579,-21.414)
O6: (-36.260,-109.024,-24.452)
O4': (-42.337,-106.438,-23.495)
C8: (-40.111,-108.145,-23.107)
C2: (-38.438,-107.858,-27.064)
C6: (-37.291,-108.610,-25.033)
C5: (-38.536,-108.350,-24.446)
C4: (-39.583,-107.884,-25.205)
P: (-42.202,-107.211,-19.261)
C4': (-43.557,-106.899,-22.878)
C2': (-43.021,-108.416,-24.616)
O2': (-43.992,-108.093,-25.604)
N1: (-37.347,-108.323,-26.393)
N2: (-38.235,-107.657,-28.369)
N3: (-39.609,-107.613,-26.515)
N7: (-38.862,-108.504,-23.130)
N9: (-40.616,-107.772,-24.322)
O5': (-42.339,-107.045,-20.829)
O3': (-44.967,-108.850,-23.191)
OP2: (-41.393,-108.419,-18.961)
C3': (-43.633,-108.372,-23.228)
C1': (-41.987,-107.286,-24.556)
C5': (-43.532,-106.579,-21.414)
O6: (-36.260,-109.024,-24.452)
O4': (-42.337,-106.438,-23.495)
C8: (-40.111,-108.145,-23.107)
C2: (-38.438,-107.858,-27.064)
C6: (-37.291,-108.610,-25.033)
C5: (-38.536,-108.350,-24.446)
C4: (-39.583,-107.884,-25.205)
P: (-42.202,-107.211,-19.261)
C4': (-43.557,-106.899,-22.878)
C2': (-43.021,-108.416,-24.616)
O2': (-43.992,-108.093,-25.604)
N1: (-37.347,-108.323,-26.393)
N2: (-38.235,-107.657,-28.369)
N3: (-39.609,-107.613,-26.515)
N7: (-38.862,-108.504,-23.130)
N9: (-40.616,-107.772,-24.322)
O5': (-42.339,-107.045,-20.829)
O3': (-44.967,-108.850,-23.191)
Image (generated by PyMOL):