Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2363:A2362
Extra
PDB:
ATOM 1 O3' U A2362 110.407 -61.948 1.405 1.00 48.76 O
ATOM 2 P G A2363 111.038 -62.436 2.806 1.00 50.92 P
ATOM 3 OP1 G A2363 112.352 -63.052 2.483 1.00 47.05 O
ATOM 4 OP2 G A2363 110.020 -63.210 3.561 1.00 53.36 O
ATOM 5 O5' G A2363 111.320 -61.116 3.639 1.00 38.49 O
ATOM 6 C5' G A2363 111.600 -59.890 2.982 1.00 45.51 C
ATOM 7 C4' G A2363 110.541 -58.895 3.338 1.00 48.78 C
ATOM 8 O4' G A2363 109.302 -59.623 3.331 1.00 48.83 O
ATOM 9 C3' G A2363 110.638 -58.301 4.743 1.00 48.39 C
ATOM 10 O3' G A2363 111.169 -56.975 4.634 1.00 45.43 O
ATOM 11 C2' G A2363 109.196 -58.339 5.286 1.00 47.14 C
ATOM 12 O2' G A2363 108.707 -57.065 5.635 1.00 51.64 O
ATOM 13 C1' G A2363 108.394 -58.909 4.113 1.00 48.37 C
ATOM 14 N9 G A2363 107.326 -59.820 4.485 1.00 49.90 N
ATOM 15 C8 G A2363 107.428 -61.173 4.689 1.00 54.38 C
ATOM 16 N7 G A2363 106.280 -61.737 4.952 1.00 60.12 N
ATOM 17 C5 G A2363 105.371 -60.690 4.928 1.00 52.65 C
ATOM 18 C6 G A2363 103.980 -60.689 5.132 1.00 47.28 C
ATOM 19 O6 G A2363 103.237 -61.647 5.370 1.00 47.41 O
ATOM 20 N1 G A2363 103.453 -59.407 5.029 1.00 48.23 N
ATOM 21 C2 G A2363 104.181 -58.270 4.758 1.00 50.16 C
ATOM 22 N2 G A2363 103.501 -57.116 4.697 1.00 49.19 N
ATOM 23 N3 G A2363 105.479 -58.261 4.561 1.00 48.79 N
ATOM 24 C4 G A2363 106.006 -59.498 4.658 1.00 51.31 C
ATOM 25 P A A2364 112.612 -56.643 5.255 1.00 43.54 P
ATOM 26 OP1 A A2364 113.535 -57.787 5.026 1.00 42.59 O
ATOM 27 OP2 A A2364 112.383 -56.134 6.642 1.00 36.37 O
ATOM 28 O5' A A2364 113.160 -55.442 4.367 1.00 40.96 O
TER
ATOM 1 O3' C B2361 106.571 -66.973 -0.156 1.00 41.76 O
ATOM 2 P U B2362 107.008 -66.528 1.339 1.00 38.80 P
ATOM 3 OP1 U B2362 108.209 -67.332 1.628 1.00 23.00 O
ATOM 4 OP2 U B2362 105.820 -66.649 2.226 1.00 43.36 O
ATOM 5 O5' U B2362 107.440 -64.992 1.216 1.00 48.58 O
ATOM 6 C5' U B2362 108.716 -64.644 0.667 1.00 46.17 C
ATOM 7 C4' U B2362 108.735 -63.219 0.160 1.00 43.95 C
ATOM 8 O4' U B2362 107.432 -62.866 -0.380 1.00 50.76 O
ATOM 9 C3' U B2362 109.019 -62.106 1.158 1.00 44.77 C
ATOM 10 O3' U B2362 110.407 -61.948 1.405 1.00 48.76 O
ATOM 11 C2' U B2362 108.455 -60.877 0.447 1.00 46.49 C
ATOM 12 O2' U B2362 109.329 -60.296 -0.499 1.00 45.28 O
ATOM 13 C1' U B2362 107.247 -61.461 -0.286 1.00 51.82 C
ATOM 14 N1 U B2362 106.003 -61.148 0.437 1.00 51.53 N
ATOM 15 C2 U B2362 105.557 -59.832 0.395 1.00 50.69 C
ATOM 16 O2 U B2362 106.139 -58.956 -0.205 1.00 42.95 O
ATOM 17 N3 U B2362 104.409 -59.582 1.088 1.00 53.85 N
ATOM 18 C4 U B2362 103.670 -60.484 1.811 1.00 56.56 C
ATOM 19 O4 U B2362 102.603 -60.123 2.311 1.00 60.02 O
ATOM 20 C5 U B2362 104.192 -61.818 1.822 1.00 48.73 C
ATOM 21 C6 U B2362 105.309 -62.099 1.145 1.00 46.73 C
ATOM 22 P G B2363 111.038 -62.436 2.806 1.00 50.92 P
ATOM 23 OP1 G B2363 112.352 -63.052 2.483 1.00 47.05 O
ATOM 24 OP2 G B2363 110.020 -63.210 3.561 1.00 53.36 O
ATOM 25 O5' G B2363 111.320 -61.116 3.639 1.00 38.49 O
TER
ATOM 2 P G A2363 111.038 -62.436 2.806 1.00 50.92 P
ATOM 3 OP1 G A2363 112.352 -63.052 2.483 1.00 47.05 O
ATOM 4 OP2 G A2363 110.020 -63.210 3.561 1.00 53.36 O
ATOM 5 O5' G A2363 111.320 -61.116 3.639 1.00 38.49 O
ATOM 6 C5' G A2363 111.600 -59.890 2.982 1.00 45.51 C
ATOM 7 C4' G A2363 110.541 -58.895 3.338 1.00 48.78 C
ATOM 8 O4' G A2363 109.302 -59.623 3.331 1.00 48.83 O
ATOM 9 C3' G A2363 110.638 -58.301 4.743 1.00 48.39 C
ATOM 10 O3' G A2363 111.169 -56.975 4.634 1.00 45.43 O
ATOM 11 C2' G A2363 109.196 -58.339 5.286 1.00 47.14 C
ATOM 12 O2' G A2363 108.707 -57.065 5.635 1.00 51.64 O
ATOM 13 C1' G A2363 108.394 -58.909 4.113 1.00 48.37 C
ATOM 14 N9 G A2363 107.326 -59.820 4.485 1.00 49.90 N
ATOM 15 C8 G A2363 107.428 -61.173 4.689 1.00 54.38 C
ATOM 16 N7 G A2363 106.280 -61.737 4.952 1.00 60.12 N
ATOM 17 C5 G A2363 105.371 -60.690 4.928 1.00 52.65 C
ATOM 18 C6 G A2363 103.980 -60.689 5.132 1.00 47.28 C
ATOM 19 O6 G A2363 103.237 -61.647 5.370 1.00 47.41 O
ATOM 20 N1 G A2363 103.453 -59.407 5.029 1.00 48.23 N
ATOM 21 C2 G A2363 104.181 -58.270 4.758 1.00 50.16 C
ATOM 22 N2 G A2363 103.501 -57.116 4.697 1.00 49.19 N
ATOM 23 N3 G A2363 105.479 -58.261 4.561 1.00 48.79 N
ATOM 24 C4 G A2363 106.006 -59.498 4.658 1.00 51.31 C
ATOM 25 P A A2364 112.612 -56.643 5.255 1.00 43.54 P
ATOM 26 OP1 A A2364 113.535 -57.787 5.026 1.00 42.59 O
ATOM 27 OP2 A A2364 112.383 -56.134 6.642 1.00 36.37 O
ATOM 28 O5' A A2364 113.160 -55.442 4.367 1.00 40.96 O
TER
ATOM 1 O3' C B2361 106.571 -66.973 -0.156 1.00 41.76 O
ATOM 2 P U B2362 107.008 -66.528 1.339 1.00 38.80 P
ATOM 3 OP1 U B2362 108.209 -67.332 1.628 1.00 23.00 O
ATOM 4 OP2 U B2362 105.820 -66.649 2.226 1.00 43.36 O
ATOM 5 O5' U B2362 107.440 -64.992 1.216 1.00 48.58 O
ATOM 6 C5' U B2362 108.716 -64.644 0.667 1.00 46.17 C
ATOM 7 C4' U B2362 108.735 -63.219 0.160 1.00 43.95 C
ATOM 8 O4' U B2362 107.432 -62.866 -0.380 1.00 50.76 O
ATOM 9 C3' U B2362 109.019 -62.106 1.158 1.00 44.77 C
ATOM 10 O3' U B2362 110.407 -61.948 1.405 1.00 48.76 O
ATOM 11 C2' U B2362 108.455 -60.877 0.447 1.00 46.49 C
ATOM 12 O2' U B2362 109.329 -60.296 -0.499 1.00 45.28 O
ATOM 13 C1' U B2362 107.247 -61.461 -0.286 1.00 51.82 C
ATOM 14 N1 U B2362 106.003 -61.148 0.437 1.00 51.53 N
ATOM 15 C2 U B2362 105.557 -59.832 0.395 1.00 50.69 C
ATOM 16 O2 U B2362 106.139 -58.956 -0.205 1.00 42.95 O
ATOM 17 N3 U B2362 104.409 -59.582 1.088 1.00 53.85 N
ATOM 18 C4 U B2362 103.670 -60.484 1.811 1.00 56.56 C
ATOM 19 O4 U B2362 102.603 -60.123 2.311 1.00 60.02 O
ATOM 20 C5 U B2362 104.192 -61.818 1.822 1.00 48.73 C
ATOM 21 C6 U B2362 105.309 -62.099 1.145 1.00 46.73 C
ATOM 22 P G B2363 111.038 -62.436 2.806 1.00 50.92 P
ATOM 23 OP1 G B2363 112.352 -63.052 2.483 1.00 47.05 O
ATOM 24 OP2 G B2363 110.020 -63.210 3.561 1.00 53.36 O
ATOM 25 O5' G B2363 111.320 -61.116 3.639 1.00 38.49 O
TER
Atoms:
OP1: (112.352,-63.052,2.483)
OP2: (110.020,-63.210,3.561)
C3': (110.638,-58.301,4.743)
C1': (108.394,-58.909,4.113)
C5': (111.600,-59.890,2.982)
O6: (103.237,-61.647,5.370)
O4': (109.302,-59.623,3.331)
C8: (107.428,-61.173,4.689)
C2: (104.181,-58.270,4.758)
C6: (103.980,-60.689,5.132)
C5: (105.371,-60.690,4.928)
C4: (106.006,-59.498,4.658)
P: (111.038,-62.436,2.806)
C4': (110.541,-58.895,3.338)
C2': (109.196,-58.339,5.286)
O2': (108.707,-57.065,5.635)
N1: (103.453,-59.407,5.029)
N2: (103.501,-57.116,4.697)
N3: (105.479,-58.261,4.561)
N7: (106.280,-61.737,4.952)
N9: (107.326,-59.820,4.485)
O5': (111.320,-61.116,3.639)
O3': (111.169,-56.975,4.634)
OP2: (110.020,-63.210,3.561)
C3': (110.638,-58.301,4.743)
C1': (108.394,-58.909,4.113)
C5': (111.600,-59.890,2.982)
O6: (103.237,-61.647,5.370)
O4': (109.302,-59.623,3.331)
C8: (107.428,-61.173,4.689)
C2: (104.181,-58.270,4.758)
C6: (103.980,-60.689,5.132)
C5: (105.371,-60.690,4.928)
C4: (106.006,-59.498,4.658)
P: (111.038,-62.436,2.806)
C4': (110.541,-58.895,3.338)
C2': (109.196,-58.339,5.286)
O2': (108.707,-57.065,5.635)
N1: (103.453,-59.407,5.029)
N2: (103.501,-57.116,4.697)
N3: (105.479,-58.261,4.561)
N7: (106.280,-61.737,4.952)
N9: (107.326,-59.820,4.485)
O5': (111.320,-61.116,3.639)
O3': (111.169,-56.975,4.634)
C4: (103.670,-60.484,1.811)
N3: (104.409,-59.582,1.088)
OP1: (108.209,-67.332,1.628)
OP2: (105.820,-66.649,2.226)
C2: (105.557,-59.832,0.395)
C1': (107.247,-61.461,-0.286)
C3': (109.019,-62.106,1.158)
O5': (107.440,-64.992,1.216)
O4': (107.432,-62.866,-0.380)
C5': (108.716,-64.644,0.667)
P: (107.008,-66.528,1.339)
C4': (108.735,-63.219,0.160)
C2': (108.455,-60.877,0.447)
O2': (109.329,-60.296,-0.499)
N1: (106.003,-61.148,0.437)
O4: (102.603,-60.123,2.311)
O2: (106.139,-58.956,-0.205)
C6: (105.309,-62.099,1.145)
C5: (104.192,-61.818,1.822)
O3': (110.407,-61.948,1.405)
N3: (104.409,-59.582,1.088)
OP1: (108.209,-67.332,1.628)
OP2: (105.820,-66.649,2.226)
C2: (105.557,-59.832,0.395)
C1': (107.247,-61.461,-0.286)
C3': (109.019,-62.106,1.158)
O5': (107.440,-64.992,1.216)
O4': (107.432,-62.866,-0.380)
C5': (108.716,-64.644,0.667)
P: (107.008,-66.528,1.339)
C4': (108.735,-63.219,0.160)
C2': (108.455,-60.877,0.447)
O2': (109.329,-60.296,-0.499)
N1: (106.003,-61.148,0.437)
O4: (102.603,-60.123,2.311)
O2: (106.139,-58.956,-0.205)
C6: (105.309,-62.099,1.145)
C5: (104.192,-61.818,1.822)
O3': (110.407,-61.948,1.405)
Image (generated by PyMOL):