ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3NMU:D20:D19

Extra

PDB:
ATOM 1 O3' A A 19 25.750 9.649 -48.902 1.00132.17 O
ATOM 2 P A A 20 26.672 8.406 -48.442 1.00130.52 P
ATOM 3 OP1 A A 20 25.838 7.185 -48.549 1.00132.02 O
ATOM 4 OP2 A A 20 27.257 8.750 -47.127 1.00126.48 O
ATOM 5 O5' A A 20 27.808 8.389 -49.557 1.00129.72 O
ATOM 6 C5' A A 20 28.751 7.329 -49.632 1.00128.58 C
ATOM 7 C4' A A 20 29.906 7.713 -50.526 1.00128.67 C
ATOM 8 O4' A A 20 29.937 9.153 -50.665 1.00124.93 O
ATOM 9 C3' A A 20 31.290 7.309 -50.026 1.00130.03 C
ATOM 10 O3' A A 20 31.687 6.028 -50.494 1.00132.89 O
ATOM 11 C2' A A 20 32.189 8.442 -50.523 1.00131.30 C
ATOM 12 O2' A A 20 32.587 8.207 -51.863 1.00133.86 O
ATOM 13 C1' A A 20 31.245 9.634 -50.501 1.00128.83 C
ATOM 14 N9 A A 20 31.291 10.372 -49.227 1.00132.38 N
ATOM 15 C8 A A 20 30.280 10.378 -48.305 1.00133.24 C
ATOM 16 N7 A A 20 30.517 11.121 -47.253 1.00133.63 N
ATOM 17 C5 A A 20 31.768 11.652 -47.504 1.00131.01 C
ATOM 18 C6 A A 20 32.563 12.523 -46.750 1.00129.38 C
ATOM 19 N6 A A 20 32.193 13.015 -45.567 1.00128.68 N
ATOM 20 N1 A A 20 33.757 12.868 -47.268 1.00130.87 N
ATOM 21 C2 A A 20 34.110 12.363 -48.460 1.00133.21 C
ATOM 22 N3 A A 20 33.447 11.534 -49.267 1.00134.42 N
ATOM 23 C4 A A 20 32.262 11.208 -48.721 1.00133.19 C
ATOM 24 P A A 21 32.848 5.193 -49.752 1.00139.75 P
ATOM 25 OP1 A A 21 33.272 4.103 -50.669 1.00130.48 O
ATOM 26 OP2 A A 21 32.331 4.827 -48.402 1.00133.87 O
ATOM 27 O5' A A 21 34.015 6.268 -49.616 1.00133.31 O
TER

ATOM 1 O3' G B 18 27.243 12.906 -44.813 1.00125.93 O
ATOM 2 P A B 19 25.834 13.470 -45.377 1.00133.52 P
ATOM 3 OP1 A B 19 25.859 14.949 -45.215 1.00123.59 O
ATOM 4 OP2 A B 19 24.753 12.705 -44.723 1.00128.30 O
ATOM 5 O5' A B 19 25.902 13.096 -46.927 1.00136.83 O
ATOM 6 C5' A B 19 24.767 12.579 -47.619 1.00134.37 C
ATOM 7 C4' A B 19 25.160 12.034 -48.972 1.00133.55 C
ATOM 8 O4' A B 19 25.665 13.118 -49.798 1.00132.64 O
ATOM 9 C3' A B 19 26.269 10.976 -48.956 1.00132.34 C
ATOM 10 O3' A B 19 25.750 9.649 -48.902 1.00132.17 O
ATOM 11 C2' A B 19 27.084 11.278 -50.214 1.00129.88 C
ATOM 12 O2' A B 19 26.496 10.673 -51.354 1.00128.74 O
ATOM 13 C1' A B 19 26.917 12.789 -50.337 1.00129.95 C
ATOM 14 N9 A B 19 27.934 13.533 -49.572 1.00131.39 N
ATOM 15 C8 A B 19 27.645 14.358 -48.514 1.00132.00 C
ATOM 16 N7 A B 19 28.682 14.935 -47.972 1.00131.03 N
ATOM 17 C5 A B 19 29.734 14.468 -48.739 1.00131.80 C
ATOM 18 C6 A B 19 31.107 14.723 -48.663 1.00132.41 C
ATOM 19 N6 A B 19 31.653 15.533 -47.752 1.00134.56 N
ATOM 20 N1 A B 19 31.898 14.110 -49.567 1.00133.16 N
ATOM 21 C2 A B 19 31.329 13.304 -50.475 1.00132.42 C
ATOM 22 N3 A B 19 30.049 12.979 -50.644 1.00131.38 N
ATOM 23 C4 A B 19 29.293 13.608 -49.734 1.00132.19 C
ATOM 24 P A B 20 26.672 8.406 -48.442 1.00130.52 P
ATOM 25 OP1 A B 20 25.838 7.185 -48.549 1.00132.02 O
ATOM 26 OP2 A B 20 27.257 8.750 -47.127 1.00126.48 O
ATOM 27 O5' A B 20 27.808 8.389 -49.557 1.00129.72 O
TER

Atoms:
OP1: (25.838,7.185,-48.549)
OP2: (27.257,8.750,-47.127)
C3': (31.290,7.309,-50.026)
C1': (31.245,9.634,-50.501)
C5': (28.751,7.329,-49.632)
O4': (29.937,9.153,-50.665)
C8: (30.280,10.378,-48.305)
O2': (32.587,8.207,-51.863)
C6: (32.563,12.523,-46.750)
C5: (31.768,11.652,-47.504)
C4: (32.262,11.208,-48.721)
P: (26.672,8.406,-48.442)
C4': (29.906,7.713,-50.526)
C2': (32.189,8.442,-50.523)
C2: (34.110,12.363,-48.460)
N1: (33.757,12.868,-47.268)
N3: (33.447,11.534,-49.267)
N6: (32.193,13.015,-45.567)
N7: (30.517,11.121,-47.253)
N9: (31.291,10.372,-49.227)
O5': (27.808,8.389,-49.557)
O3': (31.687,6.028,-50.494)
OP1: (25.859,14.949,-45.215)
OP2: (24.753,12.705,-44.723)
C3': (26.269,10.976,-48.956)
C1': (26.917,12.789,-50.337)
C5': (24.767,12.579,-47.619)
O4': (25.665,13.118,-49.798)
C8: (27.645,14.358,-48.514)
O2': (26.496,10.673,-51.354)
C6: (31.107,14.723,-48.663)
C5: (29.734,14.468,-48.739)
C4: (29.293,13.608,-49.734)
P: (25.834,13.470,-45.377)
C4': (25.160,12.034,-48.972)
C2': (27.084,11.278,-50.214)
C2: (31.329,13.304,-50.475)
N1: (31.898,14.110,-49.567)
N3: (30.049,12.979,-50.644)
N6: (31.653,15.533,-47.752)
N7: (28.682,14.935,-47.972)
N9: (27.934,13.533,-49.572)
O5': (25.902,13.096,-46.927)
O3': (25.750,9.649,-48.902)
Image (generated by PyMOL):
PyMOL image
show in jmol