Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:P110:P109
Extra
PDB:
ATOM 1 O3' U A 109 -11.046 -7.630 19.028 1.00 52.83 O
ATOM 2 P G A 110 -11.886 -8.994 19.038 1.00 52.78 P
ATOM 3 OP1 G A 110 -13.300 -8.657 18.749 1.00 53.02 O
ATOM 4 OP2 G A 110 -11.549 -9.726 20.279 1.00 52.61 O
ATOM 5 O5' G A 110 -11.276 -9.805 17.800 1.00 52.05 O
ATOM 6 C5' G A 110 -11.549 -9.399 16.459 1.00 51.04 C
ATOM 7 C4' G A 110 -10.534 -9.981 15.489 1.00 50.38 C
ATOM 8 O4' G A 110 -9.188 -9.662 15.930 1.00 50.04 O
ATOM 9 C3' G A 110 -10.552 -11.498 15.367 1.00 49.77 C
ATOM 10 O3' G A 110 -11.510 -11.900 14.394 1.00 49.32 O
ATOM 11 C2' G A 110 -9.121 -11.811 14.941 1.00 49.66 C
ATOM 12 O2' G A 110 -8.920 -11.651 13.549 1.00 49.93 O
ATOM 13 C1' G A 110 -8.315 -10.752 15.685 1.00 49.36 C
ATOM 14 N9 G A 110 -7.707 -11.155 16.957 1.00 48.43 N
ATOM 15 C8 G A 110 -8.300 -11.169 18.199 1.00 48.00 C
ATOM 16 N7 G A 110 -7.505 -11.562 19.157 1.00 47.23 N
ATOM 17 C5 G A 110 -6.304 -11.821 18.514 1.00 47.04 C
ATOM 18 C6 G A 110 -5.070 -12.273 19.038 1.00 46.84 C
ATOM 19 O6 G A 110 -4.790 -12.544 20.212 1.00 46.94 O
ATOM 20 N1 G A 110 -4.096 -12.413 18.050 1.00 47.09 N
ATOM 21 C2 G A 110 -4.293 -12.143 16.714 1.00 47.25 C
ATOM 22 N2 G A 110 -3.239 -12.334 15.909 1.00 46.98 N
ATOM 23 N3 G A 110 -5.448 -11.717 16.209 1.00 47.42 N
ATOM 24 C4 G A 110 -6.409 -11.576 17.161 1.00 47.60 C
ATOM 25 P A A 111 -12.303 -13.286 14.549 1.00 49.33 P
ATOM 26 OP1 A A 111 -13.420 -13.277 13.577 1.00 49.34 O
ATOM 27 OP2 A A 111 -12.603 -13.512 15.983 1.00 48.71 O
ATOM 28 O5' A A 111 -11.217 -14.353 14.050 1.00 48.77 O
TER
ATOM 1 O3' G B 108 -7.629 -9.405 23.800 1.00 50.72 O
ATOM 2 P U B 109 -8.178 -7.897 23.739 1.00 51.22 P
ATOM 3 OP1 U B 109 -7.026 -7.001 23.979 1.00 51.53 O
ATOM 4 OP2 U B 109 -9.383 -7.790 24.592 1.00 51.55 O
ATOM 5 O5' U B 109 -8.635 -7.749 22.215 1.00 51.42 O
ATOM 6 C5' U B 109 -9.537 -6.732 21.806 1.00 52.02 C
ATOM 7 C4' U B 109 -9.369 -6.454 20.322 1.00 52.49 C
ATOM 8 O4' U B 109 -7.981 -6.128 20.068 1.00 52.85 O
ATOM 9 C3' U B 109 -9.672 -7.632 19.409 1.00 52.57 C
ATOM 10 O3' U B 109 -11.046 -7.630 19.028 1.00 52.83 O
ATOM 11 C2' U B 109 -8.751 -7.402 18.214 1.00 52.66 C
ATOM 12 O2' U B 109 -9.338 -6.604 17.206 1.00 52.47 O
ATOM 13 C1' U B 109 -7.560 -6.667 18.827 1.00 52.67 C
ATOM 14 N1 U B 109 -6.318 -7.500 19.031 1.00 52.73 N
ATOM 15 C2 U B 109 -5.584 -7.923 17.931 1.00 53.00 C
ATOM 16 O2 U B 109 -5.886 -7.671 16.777 1.00 53.44 O
ATOM 17 N3 U B 109 -4.464 -8.668 18.230 1.00 53.07 N
ATOM 18 C4 U B 109 -4.009 -9.024 19.491 1.00 53.13 C
ATOM 19 O4 U B 109 -2.987 -9.694 19.604 1.00 53.22 O
ATOM 20 C5 U B 109 -4.820 -8.548 20.587 1.00 52.97 C
ATOM 21 C6 U B 109 -5.915 -7.821 20.319 1.00 52.78 C
ATOM 22 P G B 110 -11.886 -8.994 19.038 1.00 52.78 P
ATOM 23 OP1 G B 110 -13.300 -8.657 18.749 1.00 53.02 O
ATOM 24 OP2 G B 110 -11.549 -9.726 20.279 1.00 52.61 O
ATOM 25 O5' G B 110 -11.276 -9.805 17.800 1.00 52.05 O
TER
ATOM 2 P G A 110 -11.886 -8.994 19.038 1.00 52.78 P
ATOM 3 OP1 G A 110 -13.300 -8.657 18.749 1.00 53.02 O
ATOM 4 OP2 G A 110 -11.549 -9.726 20.279 1.00 52.61 O
ATOM 5 O5' G A 110 -11.276 -9.805 17.800 1.00 52.05 O
ATOM 6 C5' G A 110 -11.549 -9.399 16.459 1.00 51.04 C
ATOM 7 C4' G A 110 -10.534 -9.981 15.489 1.00 50.38 C
ATOM 8 O4' G A 110 -9.188 -9.662 15.930 1.00 50.04 O
ATOM 9 C3' G A 110 -10.552 -11.498 15.367 1.00 49.77 C
ATOM 10 O3' G A 110 -11.510 -11.900 14.394 1.00 49.32 O
ATOM 11 C2' G A 110 -9.121 -11.811 14.941 1.00 49.66 C
ATOM 12 O2' G A 110 -8.920 -11.651 13.549 1.00 49.93 O
ATOM 13 C1' G A 110 -8.315 -10.752 15.685 1.00 49.36 C
ATOM 14 N9 G A 110 -7.707 -11.155 16.957 1.00 48.43 N
ATOM 15 C8 G A 110 -8.300 -11.169 18.199 1.00 48.00 C
ATOM 16 N7 G A 110 -7.505 -11.562 19.157 1.00 47.23 N
ATOM 17 C5 G A 110 -6.304 -11.821 18.514 1.00 47.04 C
ATOM 18 C6 G A 110 -5.070 -12.273 19.038 1.00 46.84 C
ATOM 19 O6 G A 110 -4.790 -12.544 20.212 1.00 46.94 O
ATOM 20 N1 G A 110 -4.096 -12.413 18.050 1.00 47.09 N
ATOM 21 C2 G A 110 -4.293 -12.143 16.714 1.00 47.25 C
ATOM 22 N2 G A 110 -3.239 -12.334 15.909 1.00 46.98 N
ATOM 23 N3 G A 110 -5.448 -11.717 16.209 1.00 47.42 N
ATOM 24 C4 G A 110 -6.409 -11.576 17.161 1.00 47.60 C
ATOM 25 P A A 111 -12.303 -13.286 14.549 1.00 49.33 P
ATOM 26 OP1 A A 111 -13.420 -13.277 13.577 1.00 49.34 O
ATOM 27 OP2 A A 111 -12.603 -13.512 15.983 1.00 48.71 O
ATOM 28 O5' A A 111 -11.217 -14.353 14.050 1.00 48.77 O
TER
ATOM 1 O3' G B 108 -7.629 -9.405 23.800 1.00 50.72 O
ATOM 2 P U B 109 -8.178 -7.897 23.739 1.00 51.22 P
ATOM 3 OP1 U B 109 -7.026 -7.001 23.979 1.00 51.53 O
ATOM 4 OP2 U B 109 -9.383 -7.790 24.592 1.00 51.55 O
ATOM 5 O5' U B 109 -8.635 -7.749 22.215 1.00 51.42 O
ATOM 6 C5' U B 109 -9.537 -6.732 21.806 1.00 52.02 C
ATOM 7 C4' U B 109 -9.369 -6.454 20.322 1.00 52.49 C
ATOM 8 O4' U B 109 -7.981 -6.128 20.068 1.00 52.85 O
ATOM 9 C3' U B 109 -9.672 -7.632 19.409 1.00 52.57 C
ATOM 10 O3' U B 109 -11.046 -7.630 19.028 1.00 52.83 O
ATOM 11 C2' U B 109 -8.751 -7.402 18.214 1.00 52.66 C
ATOM 12 O2' U B 109 -9.338 -6.604 17.206 1.00 52.47 O
ATOM 13 C1' U B 109 -7.560 -6.667 18.827 1.00 52.67 C
ATOM 14 N1 U B 109 -6.318 -7.500 19.031 1.00 52.73 N
ATOM 15 C2 U B 109 -5.584 -7.923 17.931 1.00 53.00 C
ATOM 16 O2 U B 109 -5.886 -7.671 16.777 1.00 53.44 O
ATOM 17 N3 U B 109 -4.464 -8.668 18.230 1.00 53.07 N
ATOM 18 C4 U B 109 -4.009 -9.024 19.491 1.00 53.13 C
ATOM 19 O4 U B 109 -2.987 -9.694 19.604 1.00 53.22 O
ATOM 20 C5 U B 109 -4.820 -8.548 20.587 1.00 52.97 C
ATOM 21 C6 U B 109 -5.915 -7.821 20.319 1.00 52.78 C
ATOM 22 P G B 110 -11.886 -8.994 19.038 1.00 52.78 P
ATOM 23 OP1 G B 110 -13.300 -8.657 18.749 1.00 53.02 O
ATOM 24 OP2 G B 110 -11.549 -9.726 20.279 1.00 52.61 O
ATOM 25 O5' G B 110 -11.276 -9.805 17.800 1.00 52.05 O
TER
Atoms:
OP1: (-13.300,-8.657,18.749)
OP2: (-11.549,-9.726,20.279)
C3': (-10.552,-11.498,15.367)
C1': (-8.315,-10.752,15.685)
C5': (-11.549,-9.399,16.459)
O6: (-4.790,-12.544,20.212)
O4': (-9.188,-9.662,15.930)
C8: (-8.300,-11.169,18.199)
C2: (-4.293,-12.143,16.714)
C6: (-5.070,-12.273,19.038)
C5: (-6.304,-11.821,18.514)
C4: (-6.409,-11.576,17.161)
P: (-11.886,-8.994,19.038)
C4': (-10.534,-9.981,15.489)
C2': (-9.121,-11.811,14.941)
O2': (-8.920,-11.651,13.549)
N1: (-4.096,-12.413,18.050)
N2: (-3.239,-12.334,15.909)
N3: (-5.448,-11.717,16.209)
N7: (-7.505,-11.562,19.157)
N9: (-7.707,-11.155,16.957)
O5': (-11.276,-9.805,17.800)
O3': (-11.510,-11.900,14.394)
OP2: (-11.549,-9.726,20.279)
C3': (-10.552,-11.498,15.367)
C1': (-8.315,-10.752,15.685)
C5': (-11.549,-9.399,16.459)
O6: (-4.790,-12.544,20.212)
O4': (-9.188,-9.662,15.930)
C8: (-8.300,-11.169,18.199)
C2: (-4.293,-12.143,16.714)
C6: (-5.070,-12.273,19.038)
C5: (-6.304,-11.821,18.514)
C4: (-6.409,-11.576,17.161)
P: (-11.886,-8.994,19.038)
C4': (-10.534,-9.981,15.489)
C2': (-9.121,-11.811,14.941)
O2': (-8.920,-11.651,13.549)
N1: (-4.096,-12.413,18.050)
N2: (-3.239,-12.334,15.909)
N3: (-5.448,-11.717,16.209)
N7: (-7.505,-11.562,19.157)
N9: (-7.707,-11.155,16.957)
O5': (-11.276,-9.805,17.800)
O3': (-11.510,-11.900,14.394)
C4: (-4.009,-9.024,19.491)
N3: (-4.464,-8.668,18.230)
OP1: (-7.026,-7.001,23.979)
OP2: (-9.383,-7.790,24.592)
C2: (-5.584,-7.923,17.931)
C1': (-7.560,-6.667,18.827)
C3': (-9.672,-7.632,19.409)
O5': (-8.635,-7.749,22.215)
O4': (-7.981,-6.128,20.068)
C5': (-9.537,-6.732,21.806)
P: (-8.178,-7.897,23.739)
C4': (-9.369,-6.454,20.322)
C2': (-8.751,-7.402,18.214)
O2': (-9.338,-6.604,17.206)
N1: (-6.318,-7.500,19.031)
O4: (-2.987,-9.694,19.604)
O2: (-5.886,-7.671,16.777)
C6: (-5.915,-7.821,20.319)
C5: (-4.820,-8.548,20.587)
O3': (-11.046,-7.630,19.028)
N3: (-4.464,-8.668,18.230)
OP1: (-7.026,-7.001,23.979)
OP2: (-9.383,-7.790,24.592)
C2: (-5.584,-7.923,17.931)
C1': (-7.560,-6.667,18.827)
C3': (-9.672,-7.632,19.409)
O5': (-8.635,-7.749,22.215)
O4': (-7.981,-6.128,20.068)
C5': (-9.537,-6.732,21.806)
P: (-8.178,-7.897,23.739)
C4': (-9.369,-6.454,20.322)
C2': (-8.751,-7.402,18.214)
O2': (-9.338,-6.604,17.206)
N1: (-6.318,-7.500,19.031)
O4: (-2.987,-9.694,19.604)
O2: (-5.886,-7.671,16.777)
C6: (-5.915,-7.821,20.319)
C5: (-4.820,-8.548,20.587)
O3': (-11.046,-7.630,19.028)
Image (generated by PyMOL):