Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0654:0653
Extra
PDB:
ATOM 1 O3' A A 653 45.153 100.834 34.139 1.00 29.46 O
ATOM 2 P A A 654 44.511 102.040 33.303 1.00 33.56 P
ATOM 3 OP1 A A 654 44.328 103.181 34.229 1.00 31.91 O
ATOM 4 OP2 A A 654 43.347 101.528 32.541 1.00 32.68 O
ATOM 5 O5' A A 654 45.675 102.415 32.280 1.00 33.80 O
ATOM 6 C5' A A 654 46.990 102.771 32.764 1.00 29.80 C
ATOM 7 C4' A A 654 48.025 102.558 31.685 1.00 31.64 C
ATOM 8 O4' A A 654 48.120 101.144 31.362 1.00 32.69 O
ATOM 9 C3' A A 654 47.734 103.215 30.346 1.00 30.49 C
ATOM 10 O3' A A 654 48.088 104.583 30.332 1.00 29.11 O
ATOM 11 C2' A A 654 48.597 102.399 29.399 1.00 30.72 C
ATOM 12 O2' A A 654 49.955 102.783 29.465 1.00 30.04 O
ATOM 13 C1' A A 654 48.419 100.992 29.981 1.00 32.02 C
ATOM 14 N9 A A 654 47.314 100.265 29.352 1.00 32.91 N
ATOM 15 C8 A A 654 45.983 100.323 29.677 1.00 31.96 C
ATOM 16 N7 A A 654 45.221 99.576 28.918 1.00 32.42 N
ATOM 17 C5 A A 654 46.109 98.982 28.035 1.00 31.31 C
ATOM 18 C6 A A 654 45.921 98.085 26.974 1.00 31.15 C
ATOM 19 N6 A A 654 44.731 97.613 26.617 1.00 31.19 N
ATOM 20 N1 A A 654 47.011 97.685 26.286 1.00 31.16 N
ATOM 21 C2 A A 654 48.207 98.162 26.653 1.00 32.70 C
ATOM 22 N3 A A 654 48.511 99.011 27.633 1.00 33.37 N
ATOM 23 C4 A A 654 47.402 99.389 28.294 1.00 32.26 C
ATOM 24 P C A 655 47.063 105.661 29.728 1.00 33.35 P
ATOM 25 OP1 C A 655 47.787 106.963 29.690 1.00 32.09 O
ATOM 26 OP2 C A 655 45.773 105.561 30.456 1.00 29.82 O
ATOM 27 O5' C A 655 46.812 105.181 28.230 1.00 29.66 O
TER
ATOM 1 O3' U B 652 40.410 97.089 34.373 1.00 33.06 O
ATOM 2 P A B 653 40.912 98.496 33.785 1.00 33.80 P
ATOM 3 OP1 A B 653 40.529 99.517 34.789 1.00 34.24 O
ATOM 4 OP2 A B 653 40.424 98.626 32.388 1.00 33.43 O
ATOM 5 O5' A B 653 42.501 98.355 33.744 1.00 32.01 O
ATOM 6 C5' A B 653 43.280 98.385 34.957 1.00 28.87 C
ATOM 7 C4' A B 653 44.759 98.501 34.643 1.00 30.01 C
ATOM 8 O4' A B 653 45.288 97.255 34.121 1.00 30.25 O
ATOM 9 C3' A B 653 45.150 99.527 33.594 1.00 30.01 C
ATOM 10 O3' A B 653 45.153 100.834 34.139 1.00 29.46 O
ATOM 11 C2' A B 653 46.539 99.053 33.187 1.00 31.04 C
ATOM 12 O2' A B 653 47.555 99.416 34.100 1.00 31.81 O
ATOM 13 C1' A B 653 46.365 97.533 33.239 1.00 31.08 C
ATOM 14 N9 A B 653 46.084 96.917 31.941 1.00 31.73 N
ATOM 15 C8 A B 653 44.882 96.446 31.476 1.00 33.46 C
ATOM 16 N7 A B 653 44.955 95.894 30.291 1.00 34.19 N
ATOM 17 C5 A B 653 46.292 96.015 29.949 1.00 32.73 C
ATOM 18 C6 A B 653 47.016 95.606 28.819 1.00 32.91 C
ATOM 19 N6 A B 653 46.476 94.939 27.803 1.00 32.64 N
ATOM 20 N1 A B 653 48.334 95.901 28.773 1.00 33.06 N
ATOM 21 C2 A B 653 48.875 96.553 29.805 1.00 32.46 C
ATOM 22 N3 A B 653 48.301 96.973 30.932 1.00 32.59 N
ATOM 23 C4 A B 653 46.994 96.666 30.943 1.00 31.76 C
ATOM 24 P A B 654 44.511 102.040 33.303 1.00 33.56 P
ATOM 25 OP1 A B 654 44.328 103.181 34.229 1.00 31.91 O
ATOM 26 OP2 A B 654 43.347 101.528 32.541 1.00 32.68 O
ATOM 27 O5' A B 654 45.675 102.415 32.280 1.00 33.80 O
TER
ATOM 2 P A A 654 44.511 102.040 33.303 1.00 33.56 P
ATOM 3 OP1 A A 654 44.328 103.181 34.229 1.00 31.91 O
ATOM 4 OP2 A A 654 43.347 101.528 32.541 1.00 32.68 O
ATOM 5 O5' A A 654 45.675 102.415 32.280 1.00 33.80 O
ATOM 6 C5' A A 654 46.990 102.771 32.764 1.00 29.80 C
ATOM 7 C4' A A 654 48.025 102.558 31.685 1.00 31.64 C
ATOM 8 O4' A A 654 48.120 101.144 31.362 1.00 32.69 O
ATOM 9 C3' A A 654 47.734 103.215 30.346 1.00 30.49 C
ATOM 10 O3' A A 654 48.088 104.583 30.332 1.00 29.11 O
ATOM 11 C2' A A 654 48.597 102.399 29.399 1.00 30.72 C
ATOM 12 O2' A A 654 49.955 102.783 29.465 1.00 30.04 O
ATOM 13 C1' A A 654 48.419 100.992 29.981 1.00 32.02 C
ATOM 14 N9 A A 654 47.314 100.265 29.352 1.00 32.91 N
ATOM 15 C8 A A 654 45.983 100.323 29.677 1.00 31.96 C
ATOM 16 N7 A A 654 45.221 99.576 28.918 1.00 32.42 N
ATOM 17 C5 A A 654 46.109 98.982 28.035 1.00 31.31 C
ATOM 18 C6 A A 654 45.921 98.085 26.974 1.00 31.15 C
ATOM 19 N6 A A 654 44.731 97.613 26.617 1.00 31.19 N
ATOM 20 N1 A A 654 47.011 97.685 26.286 1.00 31.16 N
ATOM 21 C2 A A 654 48.207 98.162 26.653 1.00 32.70 C
ATOM 22 N3 A A 654 48.511 99.011 27.633 1.00 33.37 N
ATOM 23 C4 A A 654 47.402 99.389 28.294 1.00 32.26 C
ATOM 24 P C A 655 47.063 105.661 29.728 1.00 33.35 P
ATOM 25 OP1 C A 655 47.787 106.963 29.690 1.00 32.09 O
ATOM 26 OP2 C A 655 45.773 105.561 30.456 1.00 29.82 O
ATOM 27 O5' C A 655 46.812 105.181 28.230 1.00 29.66 O
TER
ATOM 1 O3' U B 652 40.410 97.089 34.373 1.00 33.06 O
ATOM 2 P A B 653 40.912 98.496 33.785 1.00 33.80 P
ATOM 3 OP1 A B 653 40.529 99.517 34.789 1.00 34.24 O
ATOM 4 OP2 A B 653 40.424 98.626 32.388 1.00 33.43 O
ATOM 5 O5' A B 653 42.501 98.355 33.744 1.00 32.01 O
ATOM 6 C5' A B 653 43.280 98.385 34.957 1.00 28.87 C
ATOM 7 C4' A B 653 44.759 98.501 34.643 1.00 30.01 C
ATOM 8 O4' A B 653 45.288 97.255 34.121 1.00 30.25 O
ATOM 9 C3' A B 653 45.150 99.527 33.594 1.00 30.01 C
ATOM 10 O3' A B 653 45.153 100.834 34.139 1.00 29.46 O
ATOM 11 C2' A B 653 46.539 99.053 33.187 1.00 31.04 C
ATOM 12 O2' A B 653 47.555 99.416 34.100 1.00 31.81 O
ATOM 13 C1' A B 653 46.365 97.533 33.239 1.00 31.08 C
ATOM 14 N9 A B 653 46.084 96.917 31.941 1.00 31.73 N
ATOM 15 C8 A B 653 44.882 96.446 31.476 1.00 33.46 C
ATOM 16 N7 A B 653 44.955 95.894 30.291 1.00 34.19 N
ATOM 17 C5 A B 653 46.292 96.015 29.949 1.00 32.73 C
ATOM 18 C6 A B 653 47.016 95.606 28.819 1.00 32.91 C
ATOM 19 N6 A B 653 46.476 94.939 27.803 1.00 32.64 N
ATOM 20 N1 A B 653 48.334 95.901 28.773 1.00 33.06 N
ATOM 21 C2 A B 653 48.875 96.553 29.805 1.00 32.46 C
ATOM 22 N3 A B 653 48.301 96.973 30.932 1.00 32.59 N
ATOM 23 C4 A B 653 46.994 96.666 30.943 1.00 31.76 C
ATOM 24 P A B 654 44.511 102.040 33.303 1.00 33.56 P
ATOM 25 OP1 A B 654 44.328 103.181 34.229 1.00 31.91 O
ATOM 26 OP2 A B 654 43.347 101.528 32.541 1.00 32.68 O
ATOM 27 O5' A B 654 45.675 102.415 32.280 1.00 33.80 O
TER
Atoms:
OP1: (44.328,103.181,34.229)
OP2: (43.347,101.528,32.541)
C3': (47.734,103.215,30.346)
C1': (48.419,100.992,29.981)
C5': (46.990,102.771,32.764)
O4': (48.120,101.144,31.362)
C8: (45.983,100.323,29.677)
O2': (49.955,102.783,29.465)
C6: (45.921,98.085,26.974)
C5: (46.109,98.982,28.035)
C4: (47.402,99.389,28.294)
P: (44.511,102.040,33.303)
C4': (48.025,102.558,31.685)
C2': (48.597,102.399,29.399)
C2: (48.207,98.162,26.653)
N1: (47.011,97.685,26.286)
N3: (48.511,99.011,27.633)
N6: (44.731,97.613,26.617)
N7: (45.221,99.576,28.918)
N9: (47.314,100.265,29.352)
O5': (45.675,102.415,32.280)
O3': (48.088,104.583,30.332)
OP2: (43.347,101.528,32.541)
C3': (47.734,103.215,30.346)
C1': (48.419,100.992,29.981)
C5': (46.990,102.771,32.764)
O4': (48.120,101.144,31.362)
C8: (45.983,100.323,29.677)
O2': (49.955,102.783,29.465)
C6: (45.921,98.085,26.974)
C5: (46.109,98.982,28.035)
C4: (47.402,99.389,28.294)
P: (44.511,102.040,33.303)
C4': (48.025,102.558,31.685)
C2': (48.597,102.399,29.399)
C2: (48.207,98.162,26.653)
N1: (47.011,97.685,26.286)
N3: (48.511,99.011,27.633)
N6: (44.731,97.613,26.617)
N7: (45.221,99.576,28.918)
N9: (47.314,100.265,29.352)
O5': (45.675,102.415,32.280)
O3': (48.088,104.583,30.332)
OP1: (40.529,99.517,34.789)
OP2: (40.424,98.626,32.388)
C3': (45.150,99.527,33.594)
C1': (46.365,97.533,33.239)
C5': (43.280,98.385,34.957)
O4': (45.288,97.255,34.121)
C8: (44.882,96.446,31.476)
O2': (47.555,99.416,34.100)
C6: (47.016,95.606,28.819)
C5: (46.292,96.015,29.949)
C4: (46.994,96.666,30.943)
P: (40.912,98.496,33.785)
C4': (44.759,98.501,34.643)
C2': (46.539,99.053,33.187)
C2: (48.875,96.553,29.805)
N1: (48.334,95.901,28.773)
N3: (48.301,96.973,30.932)
N6: (46.476,94.939,27.803)
N7: (44.955,95.894,30.291)
N9: (46.084,96.917,31.941)
O5': (42.501,98.355,33.744)
O3': (45.153,100.834,34.139)
OP2: (40.424,98.626,32.388)
C3': (45.150,99.527,33.594)
C1': (46.365,97.533,33.239)
C5': (43.280,98.385,34.957)
O4': (45.288,97.255,34.121)
C8: (44.882,96.446,31.476)
O2': (47.555,99.416,34.100)
C6: (47.016,95.606,28.819)
C5: (46.292,96.015,29.949)
C4: (46.994,96.666,30.943)
P: (40.912,98.496,33.785)
C4': (44.759,98.501,34.643)
C2': (46.539,99.053,33.187)
C2: (48.875,96.553,29.805)
N1: (48.334,95.901,28.773)
N3: (48.301,96.973,30.932)
N6: (46.476,94.939,27.803)
N7: (44.955,95.894,30.291)
N9: (46.084,96.917,31.941)
O5': (42.501,98.355,33.744)
O3': (45.153,100.834,34.139)
Image (generated by PyMOL):