Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0654:0653
Extra
PDB:
ATOM 1 O3' A A 653 44.982 100.669 34.068 1.00 44.61 O
ATOM 2 P A A 654 44.324 101.867 33.226 1.00 47.17 P
ATOM 3 OP1 A A 654 44.116 102.984 34.187 1.00 47.14 O
ATOM 4 OP2 A A 654 43.172 101.363 32.445 1.00 46.80 O
ATOM 5 O5' A A 654 45.478 102.273 32.202 1.00 45.20 O
ATOM 6 C5' A A 654 46.759 102.715 32.680 1.00 40.92 C
ATOM 7 C4' A A 654 47.823 102.480 31.635 1.00 43.63 C
ATOM 8 O4' A A 654 47.948 101.055 31.370 1.00 41.99 O
ATOM 9 C3' A A 654 47.584 103.090 30.261 1.00 42.56 C
ATOM 10 O3' A A 654 47.954 104.458 30.215 1.00 42.29 O
ATOM 11 C2' A A 654 48.489 102.238 29.389 1.00 42.69 C
ATOM 12 O2' A A 654 49.845 102.591 29.554 1.00 41.74 O
ATOM 13 C1' A A 654 48.268 100.853 30.003 1.00 44.33 C
ATOM 14 N9 A A 654 47.152 100.139 29.376 1.00 45.39 N
ATOM 15 C8 A A 654 45.819 100.241 29.691 1.00 45.05 C
ATOM 16 N7 A A 654 45.043 99.493 28.953 1.00 45.73 N
ATOM 17 C5 A A 654 45.920 98.851 28.092 1.00 47.15 C
ATOM 18 C6 A A 654 45.712 97.927 27.059 1.00 47.51 C
ATOM 19 N6 A A 654 44.508 97.477 26.714 1.00 46.56 N
ATOM 20 N1 A A 654 46.797 97.478 26.386 1.00 47.26 N
ATOM 21 C2 A A 654 48.004 97.940 26.741 1.00 47.16 C
ATOM 22 N3 A A 654 48.325 98.813 27.695 1.00 47.37 N
ATOM 23 C4 A A 654 47.223 99.235 28.343 1.00 45.87 C
ATOM 24 P C A 655 46.887 105.560 29.724 1.00 45.30 P
ATOM 25 OP1 C A 655 47.596 106.868 29.769 1.00 46.82 O
ATOM 26 OP2 C A 655 45.608 105.395 30.468 1.00 41.92 O
ATOM 27 O5' C A 655 46.620 105.194 28.197 1.00 44.51 O
TER
ATOM 1 O3' U B 652 40.178 96.990 34.326 1.00 47.03 O
ATOM 2 P A B 653 40.732 98.383 33.741 1.00 46.48 P
ATOM 3 OP1 A B 653 40.353 99.426 34.731 1.00 44.28 O
ATOM 4 OP2 A B 653 40.279 98.508 32.326 1.00 45.41 O
ATOM 5 O5' A B 653 42.313 98.202 33.720 1.00 42.17 O
ATOM 6 C5' A B 653 43.084 98.261 34.931 1.00 42.52 C
ATOM 7 C4' A B 653 44.565 98.343 34.615 1.00 42.52 C
ATOM 8 O4' A B 653 45.060 97.084 34.089 1.00 41.83 O
ATOM 9 C3' A B 653 44.964 99.351 33.550 1.00 43.67 C
ATOM 10 O3' A B 653 44.982 100.669 34.068 1.00 44.61 O
ATOM 11 C2' A B 653 46.346 98.856 33.151 1.00 43.68 C
ATOM 12 O2' A B 653 47.351 99.206 34.081 1.00 42.22 O
ATOM 13 C1' A B 653 46.145 97.340 33.206 1.00 44.00 C
ATOM 14 N9 A B 653 45.864 96.737 31.900 1.00 43.47 N
ATOM 15 C8 A B 653 44.665 96.303 31.387 1.00 44.72 C
ATOM 16 N7 A B 653 44.768 95.746 30.205 1.00 42.82 N
ATOM 17 C5 A B 653 46.121 95.826 29.916 1.00 42.58 C
ATOM 18 C6 A B 653 46.883 95.387 28.818 1.00 44.00 C
ATOM 19 N6 A B 653 46.375 94.717 27.782 1.00 41.52 N
ATOM 20 N1 A B 653 48.209 95.650 28.828 1.00 44.59 N
ATOM 21 C2 A B 653 48.721 96.296 29.876 1.00 43.74 C
ATOM 22 N3 A B 653 48.112 96.738 30.974 1.00 42.56 N
ATOM 23 C4 A B 653 46.801 96.464 30.934 1.00 42.07 C
ATOM 24 P A B 654 44.324 101.867 33.226 1.00 47.17 P
ATOM 25 OP1 A B 654 44.116 102.984 34.187 1.00 47.14 O
ATOM 26 OP2 A B 654 43.172 101.363 32.445 1.00 46.80 O
ATOM 27 O5' A B 654 45.478 102.273 32.202 1.00 45.20 O
TER
ATOM 2 P A A 654 44.324 101.867 33.226 1.00 47.17 P
ATOM 3 OP1 A A 654 44.116 102.984 34.187 1.00 47.14 O
ATOM 4 OP2 A A 654 43.172 101.363 32.445 1.00 46.80 O
ATOM 5 O5' A A 654 45.478 102.273 32.202 1.00 45.20 O
ATOM 6 C5' A A 654 46.759 102.715 32.680 1.00 40.92 C
ATOM 7 C4' A A 654 47.823 102.480 31.635 1.00 43.63 C
ATOM 8 O4' A A 654 47.948 101.055 31.370 1.00 41.99 O
ATOM 9 C3' A A 654 47.584 103.090 30.261 1.00 42.56 C
ATOM 10 O3' A A 654 47.954 104.458 30.215 1.00 42.29 O
ATOM 11 C2' A A 654 48.489 102.238 29.389 1.00 42.69 C
ATOM 12 O2' A A 654 49.845 102.591 29.554 1.00 41.74 O
ATOM 13 C1' A A 654 48.268 100.853 30.003 1.00 44.33 C
ATOM 14 N9 A A 654 47.152 100.139 29.376 1.00 45.39 N
ATOM 15 C8 A A 654 45.819 100.241 29.691 1.00 45.05 C
ATOM 16 N7 A A 654 45.043 99.493 28.953 1.00 45.73 N
ATOM 17 C5 A A 654 45.920 98.851 28.092 1.00 47.15 C
ATOM 18 C6 A A 654 45.712 97.927 27.059 1.00 47.51 C
ATOM 19 N6 A A 654 44.508 97.477 26.714 1.00 46.56 N
ATOM 20 N1 A A 654 46.797 97.478 26.386 1.00 47.26 N
ATOM 21 C2 A A 654 48.004 97.940 26.741 1.00 47.16 C
ATOM 22 N3 A A 654 48.325 98.813 27.695 1.00 47.37 N
ATOM 23 C4 A A 654 47.223 99.235 28.343 1.00 45.87 C
ATOM 24 P C A 655 46.887 105.560 29.724 1.00 45.30 P
ATOM 25 OP1 C A 655 47.596 106.868 29.769 1.00 46.82 O
ATOM 26 OP2 C A 655 45.608 105.395 30.468 1.00 41.92 O
ATOM 27 O5' C A 655 46.620 105.194 28.197 1.00 44.51 O
TER
ATOM 1 O3' U B 652 40.178 96.990 34.326 1.00 47.03 O
ATOM 2 P A B 653 40.732 98.383 33.741 1.00 46.48 P
ATOM 3 OP1 A B 653 40.353 99.426 34.731 1.00 44.28 O
ATOM 4 OP2 A B 653 40.279 98.508 32.326 1.00 45.41 O
ATOM 5 O5' A B 653 42.313 98.202 33.720 1.00 42.17 O
ATOM 6 C5' A B 653 43.084 98.261 34.931 1.00 42.52 C
ATOM 7 C4' A B 653 44.565 98.343 34.615 1.00 42.52 C
ATOM 8 O4' A B 653 45.060 97.084 34.089 1.00 41.83 O
ATOM 9 C3' A B 653 44.964 99.351 33.550 1.00 43.67 C
ATOM 10 O3' A B 653 44.982 100.669 34.068 1.00 44.61 O
ATOM 11 C2' A B 653 46.346 98.856 33.151 1.00 43.68 C
ATOM 12 O2' A B 653 47.351 99.206 34.081 1.00 42.22 O
ATOM 13 C1' A B 653 46.145 97.340 33.206 1.00 44.00 C
ATOM 14 N9 A B 653 45.864 96.737 31.900 1.00 43.47 N
ATOM 15 C8 A B 653 44.665 96.303 31.387 1.00 44.72 C
ATOM 16 N7 A B 653 44.768 95.746 30.205 1.00 42.82 N
ATOM 17 C5 A B 653 46.121 95.826 29.916 1.00 42.58 C
ATOM 18 C6 A B 653 46.883 95.387 28.818 1.00 44.00 C
ATOM 19 N6 A B 653 46.375 94.717 27.782 1.00 41.52 N
ATOM 20 N1 A B 653 48.209 95.650 28.828 1.00 44.59 N
ATOM 21 C2 A B 653 48.721 96.296 29.876 1.00 43.74 C
ATOM 22 N3 A B 653 48.112 96.738 30.974 1.00 42.56 N
ATOM 23 C4 A B 653 46.801 96.464 30.934 1.00 42.07 C
ATOM 24 P A B 654 44.324 101.867 33.226 1.00 47.17 P
ATOM 25 OP1 A B 654 44.116 102.984 34.187 1.00 47.14 O
ATOM 26 OP2 A B 654 43.172 101.363 32.445 1.00 46.80 O
ATOM 27 O5' A B 654 45.478 102.273 32.202 1.00 45.20 O
TER
Atoms:
OP1: (44.116,102.984,34.187)
OP2: (43.172,101.363,32.445)
C3': (47.584,103.090,30.261)
C1': (48.268,100.853,30.003)
C5': (46.759,102.715,32.680)
O4': (47.948,101.055,31.370)
C8: (45.819,100.241,29.691)
O2': (49.845,102.591,29.554)
C6: (45.712,97.927,27.059)
C5: (45.920,98.851,28.092)
C4: (47.223,99.235,28.343)
P: (44.324,101.867,33.226)
C4': (47.823,102.480,31.635)
C2': (48.489,102.238,29.389)
C2: (48.004,97.940,26.741)
N1: (46.797,97.478,26.386)
N3: (48.325,98.813,27.695)
N6: (44.508,97.477,26.714)
N7: (45.043,99.493,28.953)
N9: (47.152,100.139,29.376)
O5': (45.478,102.273,32.202)
O3': (47.954,104.458,30.215)
OP2: (43.172,101.363,32.445)
C3': (47.584,103.090,30.261)
C1': (48.268,100.853,30.003)
C5': (46.759,102.715,32.680)
O4': (47.948,101.055,31.370)
C8: (45.819,100.241,29.691)
O2': (49.845,102.591,29.554)
C6: (45.712,97.927,27.059)
C5: (45.920,98.851,28.092)
C4: (47.223,99.235,28.343)
P: (44.324,101.867,33.226)
C4': (47.823,102.480,31.635)
C2': (48.489,102.238,29.389)
C2: (48.004,97.940,26.741)
N1: (46.797,97.478,26.386)
N3: (48.325,98.813,27.695)
N6: (44.508,97.477,26.714)
N7: (45.043,99.493,28.953)
N9: (47.152,100.139,29.376)
O5': (45.478,102.273,32.202)
O3': (47.954,104.458,30.215)
OP1: (40.353,99.426,34.731)
OP2: (40.279,98.508,32.326)
C3': (44.964,99.351,33.550)
C1': (46.145,97.340,33.206)
C5': (43.084,98.261,34.931)
O4': (45.060,97.084,34.089)
C8: (44.665,96.303,31.387)
O2': (47.351,99.206,34.081)
C6: (46.883,95.387,28.818)
C5: (46.121,95.826,29.916)
C4: (46.801,96.464,30.934)
P: (40.732,98.383,33.741)
C4': (44.565,98.343,34.615)
C2': (46.346,98.856,33.151)
C2: (48.721,96.296,29.876)
N1: (48.209,95.650,28.828)
N3: (48.112,96.738,30.974)
N6: (46.375,94.717,27.782)
N7: (44.768,95.746,30.205)
N9: (45.864,96.737,31.900)
O5': (42.313,98.202,33.720)
O3': (44.982,100.669,34.068)
OP2: (40.279,98.508,32.326)
C3': (44.964,99.351,33.550)
C1': (46.145,97.340,33.206)
C5': (43.084,98.261,34.931)
O4': (45.060,97.084,34.089)
C8: (44.665,96.303,31.387)
O2': (47.351,99.206,34.081)
C6: (46.883,95.387,28.818)
C5: (46.121,95.826,29.916)
C4: (46.801,96.464,30.934)
P: (40.732,98.383,33.741)
C4': (44.565,98.343,34.615)
C2': (46.346,98.856,33.151)
C2: (48.721,96.296,29.876)
N1: (48.209,95.650,28.828)
N3: (48.112,96.738,30.974)
N6: (46.375,94.717,27.782)
N7: (44.768,95.746,30.205)
N9: (45.864,96.737,31.900)
O5': (42.313,98.202,33.720)
O3': (44.982,100.669,34.068)
Image (generated by PyMOL):