Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:Y50:Y49
Extra
PDB:
ATOM 1 O3' U A 49 5.551 4.207 65.680 1.00 36.38 O
ATOM 2 P G A 50 4.267 4.742 64.892 1.00 36.51 P
ATOM 3 OP1 G A 50 3.249 3.668 64.901 1.00 36.86 O
ATOM 4 OP2 G A 50 4.731 5.316 63.610 1.00 35.75 O
ATOM 5 O5' G A 50 3.748 5.939 65.819 1.00 36.63 O
ATOM 6 C5' G A 50 3.217 5.645 67.103 1.00 36.90 C
ATOM 7 C4' G A 50 3.283 6.861 68.008 1.00 37.29 C
ATOM 8 O4' G A 50 4.666 7.227 68.232 1.00 36.66 O
ATOM 9 C3' G A 50 2.629 8.116 67.450 1.00 37.54 C
ATOM 10 O3' G A 50 1.244 8.113 67.774 1.00 39.32 O
ATOM 11 C2' G A 50 3.374 9.213 68.207 1.00 36.79 C
ATOM 12 O2' G A 50 2.838 9.446 69.496 1.00 35.65 O
ATOM 13 C1' G A 50 4.781 8.632 68.331 1.00 35.73 C
ATOM 14 N9 G A 50 5.697 9.101 67.294 1.00 35.51 N
ATOM 15 C8 G A 50 5.851 8.581 66.032 1.00 35.06 C
ATOM 16 N7 G A 50 6.746 9.207 65.319 1.00 34.75 N
ATOM 17 C5 G A 50 7.213 10.207 66.162 1.00 34.58 C
ATOM 18 C6 G A 50 8.195 11.200 65.938 1.00 34.26 C
ATOM 19 O6 G A 50 8.860 11.394 64.913 1.00 33.65 O
ATOM 20 N1 G A 50 8.375 12.017 67.052 1.00 34.27 N
ATOM 21 C2 G A 50 7.690 11.885 68.235 1.00 34.50 C
ATOM 22 N2 G A 50 7.997 12.765 69.198 1.00 34.74 N
ATOM 23 N3 G A 50 6.767 10.956 68.459 1.00 34.62 N
ATOM 24 C4 G A 50 6.580 10.155 67.382 1.00 34.84 C
ATOM 25 P A A 51 0.103 8.025 66.652 1.00 40.31 P
ATOM 26 OP1 A A 51 -0.565 9.346 66.589 1.00 40.43 O
ATOM 27 OP2 A A 51 -0.689 6.808 66.941 1.00 40.76 O
ATOM 28 O5' A A 51 0.884 7.782 65.278 1.00 40.81 O
TER
ATOM 1 O3' C B 48 10.259 4.616 61.464 1.00 33.72 O
ATOM 2 P U B 49 8.782 5.225 61.595 1.00 34.46 P
ATOM 3 OP1 U B 49 7.882 4.346 60.816 1.00 34.74 O
ATOM 4 OP2 U B 49 8.840 6.672 61.290 1.00 34.54 O
ATOM 5 O5' U B 49 8.453 5.077 63.154 1.00 34.45 O
ATOM 6 C5' U B 49 8.136 3.807 63.716 1.00 35.42 C
ATOM 7 C4' U B 49 7.902 3.948 65.210 1.00 35.58 C
ATOM 8 O4' U B 49 9.093 4.499 65.822 1.00 35.38 O
ATOM 9 C3' U B 49 6.783 4.910 65.584 1.00 35.85 C
ATOM 10 O3' U B 49 5.551 4.207 65.680 1.00 36.38 O
ATOM 11 C2' U B 49 7.218 5.452 66.944 1.00 35.66 C
ATOM 12 O2' U B 49 6.741 4.669 68.020 1.00 36.07 O
ATOM 13 C1' U B 49 8.740 5.365 66.884 1.00 34.98 C
ATOM 14 N1 U B 49 9.435 6.673 66.693 1.00 33.95 N
ATOM 15 C2 U B 49 9.472 7.578 67.734 1.00 33.96 C
ATOM 16 O2 U B 49 8.948 7.377 68.816 1.00 33.60 O
ATOM 17 N3 U B 49 10.151 8.741 67.462 1.00 33.45 N
ATOM 18 C4 U B 49 10.788 9.077 66.282 1.00 33.60 C
ATOM 19 O4 U B 49 11.361 10.157 66.187 1.00 33.77 O
ATOM 20 C5 U B 49 10.707 8.081 65.245 1.00 33.54 C
ATOM 21 C6 U B 49 10.051 6.942 65.488 1.00 33.83 C
ATOM 22 P G B 50 4.267 4.742 64.892 1.00 36.51 P
ATOM 23 OP1 G B 50 3.249 3.668 64.901 1.00 36.86 O
ATOM 24 OP2 G B 50 4.731 5.316 63.610 1.00 35.75 O
ATOM 25 O5' G B 50 3.748 5.939 65.819 1.00 36.63 O
TER
ATOM 2 P G A 50 4.267 4.742 64.892 1.00 36.51 P
ATOM 3 OP1 G A 50 3.249 3.668 64.901 1.00 36.86 O
ATOM 4 OP2 G A 50 4.731 5.316 63.610 1.00 35.75 O
ATOM 5 O5' G A 50 3.748 5.939 65.819 1.00 36.63 O
ATOM 6 C5' G A 50 3.217 5.645 67.103 1.00 36.90 C
ATOM 7 C4' G A 50 3.283 6.861 68.008 1.00 37.29 C
ATOM 8 O4' G A 50 4.666 7.227 68.232 1.00 36.66 O
ATOM 9 C3' G A 50 2.629 8.116 67.450 1.00 37.54 C
ATOM 10 O3' G A 50 1.244 8.113 67.774 1.00 39.32 O
ATOM 11 C2' G A 50 3.374 9.213 68.207 1.00 36.79 C
ATOM 12 O2' G A 50 2.838 9.446 69.496 1.00 35.65 O
ATOM 13 C1' G A 50 4.781 8.632 68.331 1.00 35.73 C
ATOM 14 N9 G A 50 5.697 9.101 67.294 1.00 35.51 N
ATOM 15 C8 G A 50 5.851 8.581 66.032 1.00 35.06 C
ATOM 16 N7 G A 50 6.746 9.207 65.319 1.00 34.75 N
ATOM 17 C5 G A 50 7.213 10.207 66.162 1.00 34.58 C
ATOM 18 C6 G A 50 8.195 11.200 65.938 1.00 34.26 C
ATOM 19 O6 G A 50 8.860 11.394 64.913 1.00 33.65 O
ATOM 20 N1 G A 50 8.375 12.017 67.052 1.00 34.27 N
ATOM 21 C2 G A 50 7.690 11.885 68.235 1.00 34.50 C
ATOM 22 N2 G A 50 7.997 12.765 69.198 1.00 34.74 N
ATOM 23 N3 G A 50 6.767 10.956 68.459 1.00 34.62 N
ATOM 24 C4 G A 50 6.580 10.155 67.382 1.00 34.84 C
ATOM 25 P A A 51 0.103 8.025 66.652 1.00 40.31 P
ATOM 26 OP1 A A 51 -0.565 9.346 66.589 1.00 40.43 O
ATOM 27 OP2 A A 51 -0.689 6.808 66.941 1.00 40.76 O
ATOM 28 O5' A A 51 0.884 7.782 65.278 1.00 40.81 O
TER
ATOM 1 O3' C B 48 10.259 4.616 61.464 1.00 33.72 O
ATOM 2 P U B 49 8.782 5.225 61.595 1.00 34.46 P
ATOM 3 OP1 U B 49 7.882 4.346 60.816 1.00 34.74 O
ATOM 4 OP2 U B 49 8.840 6.672 61.290 1.00 34.54 O
ATOM 5 O5' U B 49 8.453 5.077 63.154 1.00 34.45 O
ATOM 6 C5' U B 49 8.136 3.807 63.716 1.00 35.42 C
ATOM 7 C4' U B 49 7.902 3.948 65.210 1.00 35.58 C
ATOM 8 O4' U B 49 9.093 4.499 65.822 1.00 35.38 O
ATOM 9 C3' U B 49 6.783 4.910 65.584 1.00 35.85 C
ATOM 10 O3' U B 49 5.551 4.207 65.680 1.00 36.38 O
ATOM 11 C2' U B 49 7.218 5.452 66.944 1.00 35.66 C
ATOM 12 O2' U B 49 6.741 4.669 68.020 1.00 36.07 O
ATOM 13 C1' U B 49 8.740 5.365 66.884 1.00 34.98 C
ATOM 14 N1 U B 49 9.435 6.673 66.693 1.00 33.95 N
ATOM 15 C2 U B 49 9.472 7.578 67.734 1.00 33.96 C
ATOM 16 O2 U B 49 8.948 7.377 68.816 1.00 33.60 O
ATOM 17 N3 U B 49 10.151 8.741 67.462 1.00 33.45 N
ATOM 18 C4 U B 49 10.788 9.077 66.282 1.00 33.60 C
ATOM 19 O4 U B 49 11.361 10.157 66.187 1.00 33.77 O
ATOM 20 C5 U B 49 10.707 8.081 65.245 1.00 33.54 C
ATOM 21 C6 U B 49 10.051 6.942 65.488 1.00 33.83 C
ATOM 22 P G B 50 4.267 4.742 64.892 1.00 36.51 P
ATOM 23 OP1 G B 50 3.249 3.668 64.901 1.00 36.86 O
ATOM 24 OP2 G B 50 4.731 5.316 63.610 1.00 35.75 O
ATOM 25 O5' G B 50 3.748 5.939 65.819 1.00 36.63 O
TER
Atoms:
OP1: (3.249,3.668,64.901)
OP2: (4.731,5.316,63.610)
C3': (2.629,8.116,67.450)
C1': (4.781,8.632,68.331)
C5': (3.217,5.645,67.103)
O6: (8.860,11.394,64.913)
O4': (4.666,7.227,68.232)
C8: (5.851,8.581,66.032)
C2: (7.690,11.885,68.235)
C6: (8.195,11.200,65.938)
C5: (7.213,10.207,66.162)
C4: (6.580,10.155,67.382)
P: (4.267,4.742,64.892)
C4': (3.283,6.861,68.008)
C2': (3.374,9.213,68.207)
O2': (2.838,9.446,69.496)
N1: (8.375,12.017,67.052)
N2: (7.997,12.765,69.198)
N3: (6.767,10.956,68.459)
N7: (6.746,9.207,65.319)
N9: (5.697,9.101,67.294)
O5': (3.748,5.939,65.819)
O3': (1.244,8.113,67.774)
OP2: (4.731,5.316,63.610)
C3': (2.629,8.116,67.450)
C1': (4.781,8.632,68.331)
C5': (3.217,5.645,67.103)
O6: (8.860,11.394,64.913)
O4': (4.666,7.227,68.232)
C8: (5.851,8.581,66.032)
C2: (7.690,11.885,68.235)
C6: (8.195,11.200,65.938)
C5: (7.213,10.207,66.162)
C4: (6.580,10.155,67.382)
P: (4.267,4.742,64.892)
C4': (3.283,6.861,68.008)
C2': (3.374,9.213,68.207)
O2': (2.838,9.446,69.496)
N1: (8.375,12.017,67.052)
N2: (7.997,12.765,69.198)
N3: (6.767,10.956,68.459)
N7: (6.746,9.207,65.319)
N9: (5.697,9.101,67.294)
O5': (3.748,5.939,65.819)
O3': (1.244,8.113,67.774)
C4: (10.788,9.077,66.282)
N3: (10.151,8.741,67.462)
OP1: (7.882,4.346,60.816)
OP2: (8.840,6.672,61.290)
C2: (9.472,7.578,67.734)
C1': (8.740,5.365,66.884)
C3': (6.783,4.910,65.584)
O5': (8.453,5.077,63.154)
O4': (9.093,4.499,65.822)
C5': (8.136,3.807,63.716)
P: (8.782,5.225,61.595)
C4': (7.902,3.948,65.210)
C2': (7.218,5.452,66.944)
O2': (6.741,4.669,68.020)
N1: (9.435,6.673,66.693)
O4: (11.361,10.157,66.187)
O2: (8.948,7.377,68.816)
C6: (10.051,6.942,65.488)
C5: (10.707,8.081,65.245)
O3': (5.551,4.207,65.680)
N3: (10.151,8.741,67.462)
OP1: (7.882,4.346,60.816)
OP2: (8.840,6.672,61.290)
C2: (9.472,7.578,67.734)
C1': (8.740,5.365,66.884)
C3': (6.783,4.910,65.584)
O5': (8.453,5.077,63.154)
O4': (9.093,4.499,65.822)
C5': (8.136,3.807,63.716)
P: (8.782,5.225,61.595)
C4': (7.902,3.948,65.210)
C2': (7.218,5.452,66.944)
O2': (6.741,4.669,68.020)
N1: (9.435,6.673,66.693)
O4: (11.361,10.157,66.187)
O2: (8.948,7.377,68.816)
C6: (10.051,6.942,65.488)
C5: (10.707,8.081,65.245)
O3': (5.551,4.207,65.680)
Image (generated by PyMOL):