Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1305:1304
Extra
PDB:
ATOM 1 O3' A A 304 31.719 -62.076 111.153 1.00 55.52 O
ATOM 2 P A A 305 32.590 -62.212 112.469 1.00 62.12 P
ATOM 3 OP1 A A 305 31.942 -61.358 113.505 1.00 62.14 O
ATOM 4 OP2 A A 305 33.980 -61.926 112.090 1.00 61.95 O
ATOM 5 O5' A A 305 32.438 -63.758 112.816 1.00 62.71 O
ATOM 6 C5' A A 305 31.154 -64.335 112.933 1.00 62.93 C
ATOM 7 C4' A A 305 31.163 -65.808 112.630 1.00 63.34 C
ATOM 8 O4' A A 305 31.322 -66.039 111.205 1.00 63.04 O
ATOM 9 C3' A A 305 32.265 -66.612 113.269 1.00 63.79 C
ATOM 10 O3' A A 305 31.972 -66.900 114.617 1.00 64.26 O
ATOM 11 C2' A A 305 32.319 -67.839 112.369 1.00 63.97 C
ATOM 12 O2' A A 305 31.239 -68.691 112.641 1.00 64.34 O
ATOM 13 C1' A A 305 32.076 -67.220 110.999 1.00 63.39 C
ATOM 14 N9 A A 305 33.341 -66.858 110.333 1.00 63.11 N
ATOM 15 C8 A A 305 33.845 -65.588 110.168 1.00 62.63 C
ATOM 16 N7 A A 305 34.999 -65.580 109.555 1.00 62.49 N
ATOM 17 C5 A A 305 35.277 -66.928 109.301 1.00 62.90 C
ATOM 18 C6 A A 305 36.358 -67.593 108.677 1.00 63.00 C
ATOM 19 N6 A A 305 37.417 -66.943 108.179 1.00 62.68 N
ATOM 20 N1 A A 305 36.335 -68.936 108.563 1.00 63.45 N
ATOM 21 C2 A A 305 35.284 -69.552 109.067 1.00 63.77 C
ATOM 22 N3 A A 305 34.199 -69.044 109.688 1.00 63.73 N
ATOM 23 C4 A A 305 34.255 -67.712 109.771 1.00 63.27 C
ATOM 24 P U A 306 33.127 -67.186 115.712 1.00 62.76 P
ATOM 25 OP1 U A 306 32.429 -67.558 116.948 1.00 63.24 O
ATOM 26 OP2 U A 306 34.058 -66.015 115.753 1.00 62.38 O
ATOM 27 O5' U A 306 33.856 -68.460 115.122 1.00 63.05 O
TER
ATOM 1 O3' A B 303 34.668 -56.899 108.365 1.00 49.36 O
ATOM 2 P A B 304 34.842 -57.952 109.573 1.00 53.89 P
ATOM 3 OP1 A B 304 34.304 -57.306 110.802 1.00 54.02 O
ATOM 4 OP2 A B 304 36.248 -58.415 109.578 1.00 54.05 O
ATOM 5 O5' A B 304 33.895 -59.136 109.114 1.00 54.11 O
ATOM 6 C5' A B 304 32.706 -59.427 109.804 1.00 54.36 C
ATOM 7 C4' A B 304 32.044 -60.652 109.247 1.00 54.59 C
ATOM 8 O4' A B 304 32.480 -60.894 107.892 1.00 54.33 O
ATOM 9 C3' A B 304 32.368 -61.945 109.926 1.00 55.17 C
ATOM 10 O3' A B 304 31.719 -62.076 111.153 1.00 55.52 O
ATOM 11 C2' A B 304 31.910 -62.946 108.896 1.00 55.23 C
ATOM 12 O2' A B 304 30.485 -62.980 108.859 1.00 55.23 O
ATOM 13 C1' A B 304 32.391 -62.273 107.621 1.00 54.70 C
ATOM 14 N9 A B 304 33.706 -62.751 107.198 1.00 54.76 N
ATOM 15 C8 A B 304 34.786 -61.971 107.058 1.00 54.49 C
ATOM 16 N7 A B 304 35.833 -62.598 106.631 1.00 54.61 N
ATOM 17 C5 A B 304 35.409 -63.875 106.475 1.00 54.98 C
ATOM 18 C6 A B 304 36.076 -65.001 106.043 1.00 55.26 C
ATOM 19 N6 A B 304 37.353 -65.004 105.698 1.00 55.21 N
ATOM 20 N1 A B 304 35.394 -66.147 105.962 1.00 55.62 N
ATOM 21 C2 A B 304 34.106 -66.148 106.306 1.00 55.68 C
ATOM 22 N3 A B 304 33.386 -65.120 106.741 1.00 55.43 N
ATOM 23 C4 A B 304 34.100 -63.991 106.800 1.00 55.07 C
ATOM 24 P A B 305 32.590 -62.212 112.469 1.00 62.12 P
ATOM 25 OP1 A B 305 31.942 -61.358 113.505 1.00 62.14 O
ATOM 26 OP2 A B 305 33.980 -61.926 112.090 1.00 61.95 O
ATOM 27 O5' A B 305 32.438 -63.758 112.816 1.00 62.71 O
TER
ATOM 2 P A A 305 32.590 -62.212 112.469 1.00 62.12 P
ATOM 3 OP1 A A 305 31.942 -61.358 113.505 1.00 62.14 O
ATOM 4 OP2 A A 305 33.980 -61.926 112.090 1.00 61.95 O
ATOM 5 O5' A A 305 32.438 -63.758 112.816 1.00 62.71 O
ATOM 6 C5' A A 305 31.154 -64.335 112.933 1.00 62.93 C
ATOM 7 C4' A A 305 31.163 -65.808 112.630 1.00 63.34 C
ATOM 8 O4' A A 305 31.322 -66.039 111.205 1.00 63.04 O
ATOM 9 C3' A A 305 32.265 -66.612 113.269 1.00 63.79 C
ATOM 10 O3' A A 305 31.972 -66.900 114.617 1.00 64.26 O
ATOM 11 C2' A A 305 32.319 -67.839 112.369 1.00 63.97 C
ATOM 12 O2' A A 305 31.239 -68.691 112.641 1.00 64.34 O
ATOM 13 C1' A A 305 32.076 -67.220 110.999 1.00 63.39 C
ATOM 14 N9 A A 305 33.341 -66.858 110.333 1.00 63.11 N
ATOM 15 C8 A A 305 33.845 -65.588 110.168 1.00 62.63 C
ATOM 16 N7 A A 305 34.999 -65.580 109.555 1.00 62.49 N
ATOM 17 C5 A A 305 35.277 -66.928 109.301 1.00 62.90 C
ATOM 18 C6 A A 305 36.358 -67.593 108.677 1.00 63.00 C
ATOM 19 N6 A A 305 37.417 -66.943 108.179 1.00 62.68 N
ATOM 20 N1 A A 305 36.335 -68.936 108.563 1.00 63.45 N
ATOM 21 C2 A A 305 35.284 -69.552 109.067 1.00 63.77 C
ATOM 22 N3 A A 305 34.199 -69.044 109.688 1.00 63.73 N
ATOM 23 C4 A A 305 34.255 -67.712 109.771 1.00 63.27 C
ATOM 24 P U A 306 33.127 -67.186 115.712 1.00 62.76 P
ATOM 25 OP1 U A 306 32.429 -67.558 116.948 1.00 63.24 O
ATOM 26 OP2 U A 306 34.058 -66.015 115.753 1.00 62.38 O
ATOM 27 O5' U A 306 33.856 -68.460 115.122 1.00 63.05 O
TER
ATOM 1 O3' A B 303 34.668 -56.899 108.365 1.00 49.36 O
ATOM 2 P A B 304 34.842 -57.952 109.573 1.00 53.89 P
ATOM 3 OP1 A B 304 34.304 -57.306 110.802 1.00 54.02 O
ATOM 4 OP2 A B 304 36.248 -58.415 109.578 1.00 54.05 O
ATOM 5 O5' A B 304 33.895 -59.136 109.114 1.00 54.11 O
ATOM 6 C5' A B 304 32.706 -59.427 109.804 1.00 54.36 C
ATOM 7 C4' A B 304 32.044 -60.652 109.247 1.00 54.59 C
ATOM 8 O4' A B 304 32.480 -60.894 107.892 1.00 54.33 O
ATOM 9 C3' A B 304 32.368 -61.945 109.926 1.00 55.17 C
ATOM 10 O3' A B 304 31.719 -62.076 111.153 1.00 55.52 O
ATOM 11 C2' A B 304 31.910 -62.946 108.896 1.00 55.23 C
ATOM 12 O2' A B 304 30.485 -62.980 108.859 1.00 55.23 O
ATOM 13 C1' A B 304 32.391 -62.273 107.621 1.00 54.70 C
ATOM 14 N9 A B 304 33.706 -62.751 107.198 1.00 54.76 N
ATOM 15 C8 A B 304 34.786 -61.971 107.058 1.00 54.49 C
ATOM 16 N7 A B 304 35.833 -62.598 106.631 1.00 54.61 N
ATOM 17 C5 A B 304 35.409 -63.875 106.475 1.00 54.98 C
ATOM 18 C6 A B 304 36.076 -65.001 106.043 1.00 55.26 C
ATOM 19 N6 A B 304 37.353 -65.004 105.698 1.00 55.21 N
ATOM 20 N1 A B 304 35.394 -66.147 105.962 1.00 55.62 N
ATOM 21 C2 A B 304 34.106 -66.148 106.306 1.00 55.68 C
ATOM 22 N3 A B 304 33.386 -65.120 106.741 1.00 55.43 N
ATOM 23 C4 A B 304 34.100 -63.991 106.800 1.00 55.07 C
ATOM 24 P A B 305 32.590 -62.212 112.469 1.00 62.12 P
ATOM 25 OP1 A B 305 31.942 -61.358 113.505 1.00 62.14 O
ATOM 26 OP2 A B 305 33.980 -61.926 112.090 1.00 61.95 O
ATOM 27 O5' A B 305 32.438 -63.758 112.816 1.00 62.71 O
TER
Atoms:
OP1: (31.942,-61.358,113.505)
OP2: (33.980,-61.926,112.090)
C3': (32.265,-66.612,113.269)
C1': (32.076,-67.220,110.999)
C5': (31.154,-64.335,112.933)
O4': (31.322,-66.039,111.205)
C8: (33.845,-65.588,110.168)
O2': (31.239,-68.691,112.641)
C6: (36.358,-67.593,108.677)
C5: (35.277,-66.928,109.301)
C4: (34.255,-67.712,109.771)
P: (32.590,-62.212,112.469)
C4': (31.163,-65.808,112.630)
C2': (32.319,-67.839,112.369)
C2: (35.284,-69.552,109.067)
N1: (36.335,-68.936,108.563)
N3: (34.199,-69.044,109.688)
N6: (37.417,-66.943,108.179)
N7: (34.999,-65.580,109.555)
N9: (33.341,-66.858,110.333)
O5': (32.438,-63.758,112.816)
O3': (31.972,-66.900,114.617)
OP2: (33.980,-61.926,112.090)
C3': (32.265,-66.612,113.269)
C1': (32.076,-67.220,110.999)
C5': (31.154,-64.335,112.933)
O4': (31.322,-66.039,111.205)
C8: (33.845,-65.588,110.168)
O2': (31.239,-68.691,112.641)
C6: (36.358,-67.593,108.677)
C5: (35.277,-66.928,109.301)
C4: (34.255,-67.712,109.771)
P: (32.590,-62.212,112.469)
C4': (31.163,-65.808,112.630)
C2': (32.319,-67.839,112.369)
C2: (35.284,-69.552,109.067)
N1: (36.335,-68.936,108.563)
N3: (34.199,-69.044,109.688)
N6: (37.417,-66.943,108.179)
N7: (34.999,-65.580,109.555)
N9: (33.341,-66.858,110.333)
O5': (32.438,-63.758,112.816)
O3': (31.972,-66.900,114.617)
OP1: (34.304,-57.306,110.802)
OP2: (36.248,-58.415,109.578)
C3': (32.368,-61.945,109.926)
C1': (32.391,-62.273,107.621)
C5': (32.706,-59.427,109.804)
O4': (32.480,-60.894,107.892)
C8: (34.786,-61.971,107.058)
O2': (30.485,-62.980,108.859)
C6: (36.076,-65.001,106.043)
C5: (35.409,-63.875,106.475)
C4: (34.100,-63.991,106.800)
P: (34.842,-57.952,109.573)
C4': (32.044,-60.652,109.247)
C2': (31.910,-62.946,108.896)
C2: (34.106,-66.148,106.306)
N1: (35.394,-66.147,105.962)
N3: (33.386,-65.120,106.741)
N6: (37.353,-65.004,105.698)
N7: (35.833,-62.598,106.631)
N9: (33.706,-62.751,107.198)
O5': (33.895,-59.136,109.114)
O3': (31.719,-62.076,111.153)
OP2: (36.248,-58.415,109.578)
C3': (32.368,-61.945,109.926)
C1': (32.391,-62.273,107.621)
C5': (32.706,-59.427,109.804)
O4': (32.480,-60.894,107.892)
C8: (34.786,-61.971,107.058)
O2': (30.485,-62.980,108.859)
C6: (36.076,-65.001,106.043)
C5: (35.409,-63.875,106.475)
C4: (34.100,-63.991,106.800)
P: (34.842,-57.952,109.573)
C4': (32.044,-60.652,109.247)
C2': (31.910,-62.946,108.896)
C2: (34.106,-66.148,106.306)
N1: (35.394,-66.147,105.962)
N3: (33.386,-65.120,106.741)
N6: (37.353,-65.004,105.698)
N7: (35.833,-62.598,106.631)
N9: (33.706,-62.751,107.198)
O5': (33.895,-59.136,109.114)
O3': (31.719,-62.076,111.153)
Image (generated by PyMOL):