Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0257:0256
Extra
PDB:
ATOM 1 O3' U A 256 80.573 108.508 -4.187 1.00 67.98 O
ATOM 2 P G A 257 79.287 108.127 -3.308 1.00 69.24 P
ATOM 3 OP1 G A 257 78.421 107.234 -4.131 1.00 68.77 O
ATOM 4 OP2 G A 257 78.727 109.395 -2.766 1.00 69.81 O
ATOM 5 O5' G A 257 79.892 107.294 -2.093 1.00 66.88 O
ATOM 6 C5' G A 257 80.722 106.144 -2.323 1.00 66.22 C
ATOM 7 C4' G A 257 81.413 105.748 -1.042 1.00 66.71 C
ATOM 8 O4' G A 257 82.438 106.722 -0.708 1.00 65.20 O
ATOM 9 C3' G A 257 80.503 105.714 0.175 1.00 66.33 C
ATOM 10 O3' G A 257 79.786 104.489 0.255 1.00 69.73 O
ATOM 11 C2' G A 257 81.485 105.930 1.317 1.00 64.06 C
ATOM 12 O2' G A 257 82.211 104.755 1.621 1.00 62.47 O
ATOM 13 C1' G A 257 82.432 106.963 0.695 1.00 61.69 C
ATOM 14 N9 G A 257 82.033 108.358 0.908 1.00 56.46 N
ATOM 15 C8 G A 257 80.916 108.986 0.406 1.00 54.16 C
ATOM 16 N7 G A 257 80.841 110.245 0.744 1.00 52.19 N
ATOM 17 C5 G A 257 81.970 110.462 1.521 1.00 50.97 C
ATOM 18 C6 G A 257 82.429 111.640 2.167 1.00 49.58 C
ATOM 19 O6 G A 257 81.917 112.766 2.175 1.00 48.22 O
ATOM 20 N1 G A 257 83.615 111.415 2.850 1.00 48.40 N
ATOM 21 C2 G A 257 84.280 110.218 2.902 1.00 50.35 C
ATOM 22 N2 G A 257 85.413 110.198 3.616 1.00 52.16 N
ATOM 23 N3 G A 257 83.869 109.117 2.302 1.00 51.04 N
ATOM 24 C4 G A 257 82.715 109.308 1.636 1.00 52.27 C
ATOM 25 P U A 258 78.246 104.493 0.724 1.00 71.50 P
ATOM 26 OP1 U A 258 77.574 103.333 0.079 1.00 72.26 O
ATOM 27 OP2 U A 258 77.694 105.865 0.522 1.00 71.26 O
ATOM 28 O5' U A 258 78.346 104.208 2.290 1.00 72.01 O
TER
ATOM 1 O3' G B 255 80.972 114.660 -4.549 1.00 71.23 O
ATOM 2 P U B 256 80.118 113.717 -3.578 1.00 71.63 P
ATOM 3 OP1 U B 256 78.771 113.578 -4.192 1.00 70.89 O
ATOM 4 OP2 U B 256 80.249 114.257 -2.190 1.00 70.27 O
ATOM 5 O5' U B 256 80.871 112.314 -3.659 1.00 69.49 O
ATOM 6 C5' U B 256 80.987 111.619 -4.913 1.00 67.39 C
ATOM 7 C4' U B 256 81.907 110.431 -4.772 1.00 66.68 C
ATOM 8 O4' U B 256 83.236 110.880 -4.414 1.00 65.42 O
ATOM 9 C3' U B 256 81.522 109.444 -3.685 1.00 66.52 C
ATOM 10 O3' U B 256 80.573 108.508 -4.187 1.00 67.98 O
ATOM 11 C2' U B 256 82.851 108.783 -3.349 1.00 65.58 C
ATOM 12 O2' U B 256 83.200 107.763 -4.260 1.00 64.30 O
ATOM 13 C1' U B 256 83.820 109.957 -3.513 1.00 64.81 C
ATOM 14 N1 U B 256 84.147 110.674 -2.270 1.00 64.05 N
ATOM 15 C2 U B 256 85.081 110.102 -1.418 1.00 62.91 C
ATOM 16 O2 U B 256 85.591 109.008 -1.623 1.00 59.97 O
ATOM 17 N3 U B 256 85.389 110.857 -0.311 1.00 63.33 N
ATOM 18 C4 U B 256 84.863 112.088 0.035 1.00 64.28 C
ATOM 19 O4 U B 256 85.250 112.646 1.067 1.00 64.91 O
ATOM 20 C5 U B 256 83.883 112.597 -0.878 1.00 64.27 C
ATOM 21 C6 U B 256 83.564 111.892 -1.969 1.00 64.41 C
ATOM 22 P G B 257 79.287 108.127 -3.308 1.00 69.24 P
ATOM 23 OP1 G B 257 78.421 107.234 -4.131 1.00 68.77 O
ATOM 24 OP2 G B 257 78.727 109.395 -2.766 1.00 69.81 O
ATOM 25 O5' G B 257 79.892 107.294 -2.093 1.00 66.88 O
TER
ATOM 2 P G A 257 79.287 108.127 -3.308 1.00 69.24 P
ATOM 3 OP1 G A 257 78.421 107.234 -4.131 1.00 68.77 O
ATOM 4 OP2 G A 257 78.727 109.395 -2.766 1.00 69.81 O
ATOM 5 O5' G A 257 79.892 107.294 -2.093 1.00 66.88 O
ATOM 6 C5' G A 257 80.722 106.144 -2.323 1.00 66.22 C
ATOM 7 C4' G A 257 81.413 105.748 -1.042 1.00 66.71 C
ATOM 8 O4' G A 257 82.438 106.722 -0.708 1.00 65.20 O
ATOM 9 C3' G A 257 80.503 105.714 0.175 1.00 66.33 C
ATOM 10 O3' G A 257 79.786 104.489 0.255 1.00 69.73 O
ATOM 11 C2' G A 257 81.485 105.930 1.317 1.00 64.06 C
ATOM 12 O2' G A 257 82.211 104.755 1.621 1.00 62.47 O
ATOM 13 C1' G A 257 82.432 106.963 0.695 1.00 61.69 C
ATOM 14 N9 G A 257 82.033 108.358 0.908 1.00 56.46 N
ATOM 15 C8 G A 257 80.916 108.986 0.406 1.00 54.16 C
ATOM 16 N7 G A 257 80.841 110.245 0.744 1.00 52.19 N
ATOM 17 C5 G A 257 81.970 110.462 1.521 1.00 50.97 C
ATOM 18 C6 G A 257 82.429 111.640 2.167 1.00 49.58 C
ATOM 19 O6 G A 257 81.917 112.766 2.175 1.00 48.22 O
ATOM 20 N1 G A 257 83.615 111.415 2.850 1.00 48.40 N
ATOM 21 C2 G A 257 84.280 110.218 2.902 1.00 50.35 C
ATOM 22 N2 G A 257 85.413 110.198 3.616 1.00 52.16 N
ATOM 23 N3 G A 257 83.869 109.117 2.302 1.00 51.04 N
ATOM 24 C4 G A 257 82.715 109.308 1.636 1.00 52.27 C
ATOM 25 P U A 258 78.246 104.493 0.724 1.00 71.50 P
ATOM 26 OP1 U A 258 77.574 103.333 0.079 1.00 72.26 O
ATOM 27 OP2 U A 258 77.694 105.865 0.522 1.00 71.26 O
ATOM 28 O5' U A 258 78.346 104.208 2.290 1.00 72.01 O
TER
ATOM 1 O3' G B 255 80.972 114.660 -4.549 1.00 71.23 O
ATOM 2 P U B 256 80.118 113.717 -3.578 1.00 71.63 P
ATOM 3 OP1 U B 256 78.771 113.578 -4.192 1.00 70.89 O
ATOM 4 OP2 U B 256 80.249 114.257 -2.190 1.00 70.27 O
ATOM 5 O5' U B 256 80.871 112.314 -3.659 1.00 69.49 O
ATOM 6 C5' U B 256 80.987 111.619 -4.913 1.00 67.39 C
ATOM 7 C4' U B 256 81.907 110.431 -4.772 1.00 66.68 C
ATOM 8 O4' U B 256 83.236 110.880 -4.414 1.00 65.42 O
ATOM 9 C3' U B 256 81.522 109.444 -3.685 1.00 66.52 C
ATOM 10 O3' U B 256 80.573 108.508 -4.187 1.00 67.98 O
ATOM 11 C2' U B 256 82.851 108.783 -3.349 1.00 65.58 C
ATOM 12 O2' U B 256 83.200 107.763 -4.260 1.00 64.30 O
ATOM 13 C1' U B 256 83.820 109.957 -3.513 1.00 64.81 C
ATOM 14 N1 U B 256 84.147 110.674 -2.270 1.00 64.05 N
ATOM 15 C2 U B 256 85.081 110.102 -1.418 1.00 62.91 C
ATOM 16 O2 U B 256 85.591 109.008 -1.623 1.00 59.97 O
ATOM 17 N3 U B 256 85.389 110.857 -0.311 1.00 63.33 N
ATOM 18 C4 U B 256 84.863 112.088 0.035 1.00 64.28 C
ATOM 19 O4 U B 256 85.250 112.646 1.067 1.00 64.91 O
ATOM 20 C5 U B 256 83.883 112.597 -0.878 1.00 64.27 C
ATOM 21 C6 U B 256 83.564 111.892 -1.969 1.00 64.41 C
ATOM 22 P G B 257 79.287 108.127 -3.308 1.00 69.24 P
ATOM 23 OP1 G B 257 78.421 107.234 -4.131 1.00 68.77 O
ATOM 24 OP2 G B 257 78.727 109.395 -2.766 1.00 69.81 O
ATOM 25 O5' G B 257 79.892 107.294 -2.093 1.00 66.88 O
TER
Atoms:
OP1: (78.421,107.234,-4.131)
OP2: (78.727,109.395,-2.766)
C3': (80.503,105.714,0.175)
C1': (82.432,106.963,0.695)
C5': (80.722,106.144,-2.323)
O6: (81.917,112.766,2.175)
O4': (82.438,106.722,-0.708)
C8: (80.916,108.986,0.406)
C2: (84.280,110.218,2.902)
C6: (82.429,111.640,2.167)
C5: (81.970,110.462,1.521)
C4: (82.715,109.308,1.636)
P: (79.287,108.127,-3.308)
C4': (81.413,105.748,-1.042)
C2': (81.485,105.930,1.317)
O2': (82.211,104.755,1.621)
N1: (83.615,111.415,2.850)
N2: (85.413,110.198,3.616)
N3: (83.869,109.117,2.302)
N7: (80.841,110.245,0.744)
N9: (82.033,108.358,0.908)
O5': (79.892,107.294,-2.093)
O3': (79.786,104.489,0.255)
OP2: (78.727,109.395,-2.766)
C3': (80.503,105.714,0.175)
C1': (82.432,106.963,0.695)
C5': (80.722,106.144,-2.323)
O6: (81.917,112.766,2.175)
O4': (82.438,106.722,-0.708)
C8: (80.916,108.986,0.406)
C2: (84.280,110.218,2.902)
C6: (82.429,111.640,2.167)
C5: (81.970,110.462,1.521)
C4: (82.715,109.308,1.636)
P: (79.287,108.127,-3.308)
C4': (81.413,105.748,-1.042)
C2': (81.485,105.930,1.317)
O2': (82.211,104.755,1.621)
N1: (83.615,111.415,2.850)
N2: (85.413,110.198,3.616)
N3: (83.869,109.117,2.302)
N7: (80.841,110.245,0.744)
N9: (82.033,108.358,0.908)
O5': (79.892,107.294,-2.093)
O3': (79.786,104.489,0.255)
C4: (84.863,112.088,0.035)
N3: (85.389,110.857,-0.311)
OP1: (78.771,113.578,-4.192)
OP2: (80.249,114.257,-2.190)
C2: (85.081,110.102,-1.418)
C1': (83.820,109.957,-3.513)
C3': (81.522,109.444,-3.685)
O5': (80.871,112.314,-3.659)
O4': (83.236,110.880,-4.414)
C5': (80.987,111.619,-4.913)
P: (80.118,113.717,-3.578)
C4': (81.907,110.431,-4.772)
C2': (82.851,108.783,-3.349)
O2': (83.200,107.763,-4.260)
N1: (84.147,110.674,-2.270)
O4: (85.250,112.646,1.067)
O2: (85.591,109.008,-1.623)
C6: (83.564,111.892,-1.969)
C5: (83.883,112.597,-0.878)
O3': (80.573,108.508,-4.187)
N3: (85.389,110.857,-0.311)
OP1: (78.771,113.578,-4.192)
OP2: (80.249,114.257,-2.190)
C2: (85.081,110.102,-1.418)
C1': (83.820,109.957,-3.513)
C3': (81.522,109.444,-3.685)
O5': (80.871,112.314,-3.659)
O4': (83.236,110.880,-4.414)
C5': (80.987,111.619,-4.913)
P: (80.118,113.717,-3.578)
C4': (81.907,110.431,-4.772)
C2': (82.851,108.783,-3.349)
O2': (83.200,107.763,-4.260)
N1: (84.147,110.674,-2.270)
O4: (85.250,112.646,1.067)
O2: (85.591,109.008,-1.623)
C6: (83.564,111.892,-1.969)
C5: (83.883,112.597,-0.878)
O3': (80.573,108.508,-4.187)
Image (generated by PyMOL):