Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0540:0539
Extra
PDB:
ATOM 1 O3' A A 539 0.101 130.292 72.828 1.00 46.65 O
ATOM 2 P A A 540 -0.545 128.942 73.411 1.00 47.04 P
ATOM 3 OP1 A A 540 -1.677 128.532 72.535 1.00 46.96 O
ATOM 4 OP2 A A 540 -0.772 129.139 74.867 1.00 46.20 O
ATOM 5 O5' A A 540 0.599 127.858 73.228 1.00 45.99 O
ATOM 6 C5' A A 540 1.087 127.527 71.926 1.00 45.64 C
ATOM 7 C4' A A 540 2.575 127.311 71.975 1.00 45.83 C
ATOM 8 O4' A A 540 3.216 128.541 72.400 1.00 45.93 O
ATOM 9 C3' A A 540 3.067 126.269 72.969 1.00 44.19 C
ATOM 10 O3' A A 540 2.956 124.961 72.419 1.00 42.86 O
ATOM 11 C2' A A 540 4.508 126.711 73.183 1.00 44.42 C
ATOM 12 O2' A A 540 5.352 126.359 72.104 1.00 44.76 O
ATOM 13 C1' A A 540 4.349 128.233 73.191 1.00 45.03 C
ATOM 14 N9 A A 540 4.113 128.753 74.533 1.00 46.09 N
ATOM 15 C8 A A 540 2.997 128.591 75.315 1.00 47.34 C
ATOM 16 N7 A A 540 3.101 129.128 76.504 1.00 48.60 N
ATOM 17 C5 A A 540 4.367 129.692 76.503 1.00 48.71 C
ATOM 18 C6 A A 540 5.088 130.389 77.480 1.00 48.86 C
ATOM 19 N6 A A 540 4.623 130.643 78.704 1.00 49.68 N
ATOM 20 N1 A A 540 6.324 130.820 77.157 1.00 50.07 N
ATOM 21 C2 A A 540 6.797 130.559 75.930 1.00 49.47 C
ATOM 22 N3 A A 540 6.220 129.904 74.930 1.00 48.77 N
ATOM 23 C4 A A 540 4.993 129.487 75.286 1.00 48.07 C
ATOM 24 P G A 541 2.964 123.670 73.381 1.00 44.05 P
ATOM 25 OP1 G A 541 4.273 123.638 74.062 1.00 47.12 O
ATOM 26 OP2 G A 541 2.545 122.508 72.569 1.00 43.58 O
ATOM 27 O5' G A 541 1.835 123.932 74.479 1.00 43.96 O
TER
ATOM 1 O3' C B 538 -1.796 134.237 77.200 1.00 56.18 O
ATOM 2 P A B 539 -1.616 132.652 77.340 1.00 56.27 P
ATOM 3 OP1 A B 539 -2.958 132.045 77.205 1.00 57.81 O
ATOM 4 OP2 A B 539 -0.817 132.388 78.559 1.00 55.90 O
ATOM 5 O5' A B 539 -0.773 132.240 76.053 1.00 52.86 O
ATOM 6 C5' A B 539 -1.251 132.534 74.729 1.00 48.92 C
ATOM 7 C4' A B 539 -0.104 132.522 73.751 1.00 48.64 C
ATOM 8 O4' A B 539 0.850 133.541 74.139 1.00 48.98 O
ATOM 9 C3' A B 539 0.699 131.232 73.719 1.00 48.08 C
ATOM 10 O3' A B 539 0.101 130.292 72.828 1.00 46.65 O
ATOM 11 C2' A B 539 2.070 131.700 73.248 1.00 47.24 C
ATOM 12 O2' A B 539 2.120 131.885 71.854 1.00 45.95 O
ATOM 13 C1' A B 539 2.168 133.075 73.911 1.00 48.89 C
ATOM 14 N9 A B 539 2.902 133.145 75.179 1.00 51.02 N
ATOM 15 C8 A B 539 2.418 132.959 76.454 1.00 51.86 C
ATOM 16 N7 A B 539 3.305 133.170 77.394 1.00 51.89 N
ATOM 17 C5 A B 539 4.457 133.500 76.694 1.00 52.69 C
ATOM 18 C6 A B 539 5.750 133.847 77.116 1.00 53.09 C
ATOM 19 N6 A B 539 6.108 133.940 78.400 1.00 53.68 N
ATOM 20 N1 A B 539 6.675 134.103 76.162 1.00 53.39 N
ATOM 21 C2 A B 539 6.310 134.021 74.878 1.00 52.95 C
ATOM 22 N3 A B 539 5.125 133.716 74.357 1.00 52.79 N
ATOM 23 C4 A B 539 4.230 133.465 75.329 1.00 52.18 C
ATOM 24 P A B 540 -0.545 128.942 73.411 1.00 47.04 P
ATOM 25 OP1 A B 540 -1.677 128.532 72.535 1.00 46.96 O
ATOM 26 OP2 A B 540 -0.772 129.139 74.867 1.00 46.20 O
ATOM 27 O5' A B 540 0.599 127.858 73.228 1.00 45.99 O
TER
ATOM 2 P A A 540 -0.545 128.942 73.411 1.00 47.04 P
ATOM 3 OP1 A A 540 -1.677 128.532 72.535 1.00 46.96 O
ATOM 4 OP2 A A 540 -0.772 129.139 74.867 1.00 46.20 O
ATOM 5 O5' A A 540 0.599 127.858 73.228 1.00 45.99 O
ATOM 6 C5' A A 540 1.087 127.527 71.926 1.00 45.64 C
ATOM 7 C4' A A 540 2.575 127.311 71.975 1.00 45.83 C
ATOM 8 O4' A A 540 3.216 128.541 72.400 1.00 45.93 O
ATOM 9 C3' A A 540 3.067 126.269 72.969 1.00 44.19 C
ATOM 10 O3' A A 540 2.956 124.961 72.419 1.00 42.86 O
ATOM 11 C2' A A 540 4.508 126.711 73.183 1.00 44.42 C
ATOM 12 O2' A A 540 5.352 126.359 72.104 1.00 44.76 O
ATOM 13 C1' A A 540 4.349 128.233 73.191 1.00 45.03 C
ATOM 14 N9 A A 540 4.113 128.753 74.533 1.00 46.09 N
ATOM 15 C8 A A 540 2.997 128.591 75.315 1.00 47.34 C
ATOM 16 N7 A A 540 3.101 129.128 76.504 1.00 48.60 N
ATOM 17 C5 A A 540 4.367 129.692 76.503 1.00 48.71 C
ATOM 18 C6 A A 540 5.088 130.389 77.480 1.00 48.86 C
ATOM 19 N6 A A 540 4.623 130.643 78.704 1.00 49.68 N
ATOM 20 N1 A A 540 6.324 130.820 77.157 1.00 50.07 N
ATOM 21 C2 A A 540 6.797 130.559 75.930 1.00 49.47 C
ATOM 22 N3 A A 540 6.220 129.904 74.930 1.00 48.77 N
ATOM 23 C4 A A 540 4.993 129.487 75.286 1.00 48.07 C
ATOM 24 P G A 541 2.964 123.670 73.381 1.00 44.05 P
ATOM 25 OP1 G A 541 4.273 123.638 74.062 1.00 47.12 O
ATOM 26 OP2 G A 541 2.545 122.508 72.569 1.00 43.58 O
ATOM 27 O5' G A 541 1.835 123.932 74.479 1.00 43.96 O
TER
ATOM 1 O3' C B 538 -1.796 134.237 77.200 1.00 56.18 O
ATOM 2 P A B 539 -1.616 132.652 77.340 1.00 56.27 P
ATOM 3 OP1 A B 539 -2.958 132.045 77.205 1.00 57.81 O
ATOM 4 OP2 A B 539 -0.817 132.388 78.559 1.00 55.90 O
ATOM 5 O5' A B 539 -0.773 132.240 76.053 1.00 52.86 O
ATOM 6 C5' A B 539 -1.251 132.534 74.729 1.00 48.92 C
ATOM 7 C4' A B 539 -0.104 132.522 73.751 1.00 48.64 C
ATOM 8 O4' A B 539 0.850 133.541 74.139 1.00 48.98 O
ATOM 9 C3' A B 539 0.699 131.232 73.719 1.00 48.08 C
ATOM 10 O3' A B 539 0.101 130.292 72.828 1.00 46.65 O
ATOM 11 C2' A B 539 2.070 131.700 73.248 1.00 47.24 C
ATOM 12 O2' A B 539 2.120 131.885 71.854 1.00 45.95 O
ATOM 13 C1' A B 539 2.168 133.075 73.911 1.00 48.89 C
ATOM 14 N9 A B 539 2.902 133.145 75.179 1.00 51.02 N
ATOM 15 C8 A B 539 2.418 132.959 76.454 1.00 51.86 C
ATOM 16 N7 A B 539 3.305 133.170 77.394 1.00 51.89 N
ATOM 17 C5 A B 539 4.457 133.500 76.694 1.00 52.69 C
ATOM 18 C6 A B 539 5.750 133.847 77.116 1.00 53.09 C
ATOM 19 N6 A B 539 6.108 133.940 78.400 1.00 53.68 N
ATOM 20 N1 A B 539 6.675 134.103 76.162 1.00 53.39 N
ATOM 21 C2 A B 539 6.310 134.021 74.878 1.00 52.95 C
ATOM 22 N3 A B 539 5.125 133.716 74.357 1.00 52.79 N
ATOM 23 C4 A B 539 4.230 133.465 75.329 1.00 52.18 C
ATOM 24 P A B 540 -0.545 128.942 73.411 1.00 47.04 P
ATOM 25 OP1 A B 540 -1.677 128.532 72.535 1.00 46.96 O
ATOM 26 OP2 A B 540 -0.772 129.139 74.867 1.00 46.20 O
ATOM 27 O5' A B 540 0.599 127.858 73.228 1.00 45.99 O
TER
Atoms:
OP1: (-1.677,128.532,72.535)
OP2: (-0.772,129.139,74.867)
C3': (3.067,126.269,72.969)
C1': (4.349,128.233,73.191)
C5': (1.087,127.527,71.926)
O4': (3.216,128.541,72.400)
C8: (2.997,128.591,75.315)
O2': (5.352,126.359,72.104)
C6: (5.088,130.389,77.480)
C5: (4.367,129.692,76.503)
C4: (4.993,129.487,75.286)
P: (-0.545,128.942,73.411)
C4': (2.575,127.311,71.975)
C2': (4.508,126.711,73.183)
C2: (6.797,130.559,75.930)
N1: (6.324,130.820,77.157)
N3: (6.220,129.904,74.930)
N6: (4.623,130.643,78.704)
N7: (3.101,129.128,76.504)
N9: (4.113,128.753,74.533)
O5': (0.599,127.858,73.228)
O3': (2.956,124.961,72.419)
OP2: (-0.772,129.139,74.867)
C3': (3.067,126.269,72.969)
C1': (4.349,128.233,73.191)
C5': (1.087,127.527,71.926)
O4': (3.216,128.541,72.400)
C8: (2.997,128.591,75.315)
O2': (5.352,126.359,72.104)
C6: (5.088,130.389,77.480)
C5: (4.367,129.692,76.503)
C4: (4.993,129.487,75.286)
P: (-0.545,128.942,73.411)
C4': (2.575,127.311,71.975)
C2': (4.508,126.711,73.183)
C2: (6.797,130.559,75.930)
N1: (6.324,130.820,77.157)
N3: (6.220,129.904,74.930)
N6: (4.623,130.643,78.704)
N7: (3.101,129.128,76.504)
N9: (4.113,128.753,74.533)
O5': (0.599,127.858,73.228)
O3': (2.956,124.961,72.419)
OP1: (-2.958,132.045,77.205)
OP2: (-0.817,132.388,78.559)
C3': (0.699,131.232,73.719)
C1': (2.168,133.075,73.911)
C5': (-1.251,132.534,74.729)
O4': (0.850,133.541,74.139)
C8: (2.418,132.959,76.454)
O2': (2.120,131.885,71.854)
C6: (5.750,133.847,77.116)
C5: (4.457,133.500,76.694)
C4: (4.230,133.465,75.329)
P: (-1.616,132.652,77.340)
C4': (-0.104,132.522,73.751)
C2': (2.070,131.700,73.248)
C2: (6.310,134.021,74.878)
N1: (6.675,134.103,76.162)
N3: (5.125,133.716,74.357)
N6: (6.108,133.940,78.400)
N7: (3.305,133.170,77.394)
N9: (2.902,133.145,75.179)
O5': (-0.773,132.240,76.053)
O3': (0.101,130.292,72.828)
OP2: (-0.817,132.388,78.559)
C3': (0.699,131.232,73.719)
C1': (2.168,133.075,73.911)
C5': (-1.251,132.534,74.729)
O4': (0.850,133.541,74.139)
C8: (2.418,132.959,76.454)
O2': (2.120,131.885,71.854)
C6: (5.750,133.847,77.116)
C5: (4.457,133.500,76.694)
C4: (4.230,133.465,75.329)
P: (-1.616,132.652,77.340)
C4': (-0.104,132.522,73.751)
C2': (2.070,131.700,73.248)
C2: (6.310,134.021,74.878)
N1: (6.675,134.103,76.162)
N3: (5.125,133.716,74.357)
N6: (6.108,133.940,78.400)
N7: (3.305,133.170,77.394)
N9: (2.902,133.145,75.179)
O5': (-0.773,132.240,76.053)
O3': (0.101,130.292,72.828)
Image (generated by PyMOL):