Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A27:A26
Extra
PDB:
ATOM 1 O3' U A 26 0.104 13.900 -30.546 1.00 35.93 O
ATOM 2 P G A 27 -0.771 12.881 -31.411 1.00 38.20 P
ATOM 3 OP1 G A 27 -0.058 11.583 -31.428 1.00 35.52 O
ATOM 4 OP2 G A 27 -1.140 13.547 -32.680 1.00 35.29 O
ATOM 5 O5' G A 27 -2.094 12.695 -30.536 1.00 36.22 O
ATOM 6 C5' G A 27 -2.015 12.083 -29.256 1.00 36.62 C
ATOM 7 C4' G A 27 -3.302 12.294 -28.478 1.00 38.28 C
ATOM 8 O4' G A 27 -3.532 13.712 -28.278 1.00 31.60 O
ATOM 9 C3' G A 27 -4.574 11.818 -29.164 1.00 35.35 C
ATOM 10 O3' G A 27 -4.728 10.407 -29.033 1.00 33.44 O
ATOM 11 C2' G A 27 -5.610 12.592 -28.353 1.00 36.39 C
ATOM 12 O2' G A 27 -5.859 12.020 -27.082 1.00 34.68 O
ATOM 13 C1' G A 27 -4.926 13.951 -28.218 1.00 33.14 C
ATOM 14 N9 G A 27 -5.323 14.828 -29.313 1.00 37.27 N
ATOM 15 C8 G A 27 -4.785 14.871 -30.577 1.00 37.10 C
ATOM 16 N7 G A 27 -5.361 15.745 -31.356 1.00 39.84 N
ATOM 17 C5 G A 27 -6.347 16.310 -30.559 1.00 35.97 C
ATOM 18 C6 G A 27 -7.293 17.315 -30.860 1.00 39.61 C
ATOM 19 O6 G A 27 -7.446 17.921 -31.929 1.00 39.99 O
ATOM 20 N1 G A 27 -8.112 17.600 -29.769 1.00 35.43 N
ATOM 21 C2 G A 27 -8.029 16.986 -28.542 1.00 34.58 C
ATOM 22 N2 G A 27 -8.907 17.392 -27.610 1.00 32.59 N
ATOM 23 N3 G A 27 -7.146 16.041 -28.248 1.00 33.53 N
ATOM 24 C4 G A 27 -6.341 15.755 -29.300 1.00 34.88 C
ATOM 25 P A A 28 -5.361 9.543 -30.227 1.00 36.72 P
ATOM 26 OP1 A A 28 -5.128 8.112 -29.922 1.00 42.50 O
ATOM 27 OP2 A A 28 -4.886 10.105 -31.510 1.00 38.20 O
ATOM 28 O5' A A 28 -6.924 9.836 -30.058 1.00 34.61 O
TER
ATOM 1 O3' C B 25 1.377 18.883 -33.843 1.00 34.13 O
ATOM 2 P U B 26 0.649 17.509 -34.226 1.00 35.88 P
ATOM 3 OP1 U B 26 1.644 16.653 -34.910 1.00 35.91 O
ATOM 4 OP2 U B 26 -0.637 17.838 -34.880 1.00 30.38 O
ATOM 5 O5' U B 26 0.338 16.838 -32.807 1.00 35.61 O
ATOM 6 C5' U B 26 1.403 16.450 -31.950 1.00 36.02 C
ATOM 7 C4' U B 26 0.882 16.199 -30.548 1.00 34.65 C
ATOM 8 O4' U B 26 0.359 17.432 -29.992 1.00 32.61 O
ATOM 9 C3' U B 26 -0.306 15.256 -30.459 1.00 33.86 C
ATOM 10 O3' U B 26 0.104 13.900 -30.546 1.00 35.93 O
ATOM 11 C2' U B 26 -0.811 15.597 -29.065 1.00 32.06 C
ATOM 12 O2' U B 26 0.010 15.050 -28.055 1.00 29.83 O
ATOM 13 C1' U B 26 -0.677 17.117 -29.079 1.00 32.30 C
ATOM 14 N1 U B 26 -1.940 17.778 -29.490 1.00 30.57 N
ATOM 15 C2 U B 26 -2.843 18.114 -28.506 1.00 30.69 C
ATOM 16 O2 U B 26 -2.642 17.902 -27.325 1.00 33.89 O
ATOM 17 N3 U B 26 -3.991 18.713 -28.952 1.00 31.16 N
ATOM 18 C4 U B 26 -4.320 19.001 -30.261 1.00 34.90 C
ATOM 19 O4 U B 26 -5.392 19.543 -30.506 1.00 34.77 O
ATOM 20 C5 U B 26 -3.329 18.615 -31.233 1.00 32.80 C
ATOM 21 C6 U B 26 -2.200 18.029 -30.821 1.00 30.95 C
ATOM 22 P G B 27 -0.771 12.881 -31.411 1.00 38.20 P
ATOM 23 OP1 G B 27 -0.058 11.583 -31.428 1.00 35.52 O
ATOM 24 OP2 G B 27 -1.140 13.547 -32.680 1.00 35.29 O
ATOM 25 O5' G B 27 -2.094 12.695 -30.536 1.00 36.22 O
TER
ATOM 2 P G A 27 -0.771 12.881 -31.411 1.00 38.20 P
ATOM 3 OP1 G A 27 -0.058 11.583 -31.428 1.00 35.52 O
ATOM 4 OP2 G A 27 -1.140 13.547 -32.680 1.00 35.29 O
ATOM 5 O5' G A 27 -2.094 12.695 -30.536 1.00 36.22 O
ATOM 6 C5' G A 27 -2.015 12.083 -29.256 1.00 36.62 C
ATOM 7 C4' G A 27 -3.302 12.294 -28.478 1.00 38.28 C
ATOM 8 O4' G A 27 -3.532 13.712 -28.278 1.00 31.60 O
ATOM 9 C3' G A 27 -4.574 11.818 -29.164 1.00 35.35 C
ATOM 10 O3' G A 27 -4.728 10.407 -29.033 1.00 33.44 O
ATOM 11 C2' G A 27 -5.610 12.592 -28.353 1.00 36.39 C
ATOM 12 O2' G A 27 -5.859 12.020 -27.082 1.00 34.68 O
ATOM 13 C1' G A 27 -4.926 13.951 -28.218 1.00 33.14 C
ATOM 14 N9 G A 27 -5.323 14.828 -29.313 1.00 37.27 N
ATOM 15 C8 G A 27 -4.785 14.871 -30.577 1.00 37.10 C
ATOM 16 N7 G A 27 -5.361 15.745 -31.356 1.00 39.84 N
ATOM 17 C5 G A 27 -6.347 16.310 -30.559 1.00 35.97 C
ATOM 18 C6 G A 27 -7.293 17.315 -30.860 1.00 39.61 C
ATOM 19 O6 G A 27 -7.446 17.921 -31.929 1.00 39.99 O
ATOM 20 N1 G A 27 -8.112 17.600 -29.769 1.00 35.43 N
ATOM 21 C2 G A 27 -8.029 16.986 -28.542 1.00 34.58 C
ATOM 22 N2 G A 27 -8.907 17.392 -27.610 1.00 32.59 N
ATOM 23 N3 G A 27 -7.146 16.041 -28.248 1.00 33.53 N
ATOM 24 C4 G A 27 -6.341 15.755 -29.300 1.00 34.88 C
ATOM 25 P A A 28 -5.361 9.543 -30.227 1.00 36.72 P
ATOM 26 OP1 A A 28 -5.128 8.112 -29.922 1.00 42.50 O
ATOM 27 OP2 A A 28 -4.886 10.105 -31.510 1.00 38.20 O
ATOM 28 O5' A A 28 -6.924 9.836 -30.058 1.00 34.61 O
TER
ATOM 1 O3' C B 25 1.377 18.883 -33.843 1.00 34.13 O
ATOM 2 P U B 26 0.649 17.509 -34.226 1.00 35.88 P
ATOM 3 OP1 U B 26 1.644 16.653 -34.910 1.00 35.91 O
ATOM 4 OP2 U B 26 -0.637 17.838 -34.880 1.00 30.38 O
ATOM 5 O5' U B 26 0.338 16.838 -32.807 1.00 35.61 O
ATOM 6 C5' U B 26 1.403 16.450 -31.950 1.00 36.02 C
ATOM 7 C4' U B 26 0.882 16.199 -30.548 1.00 34.65 C
ATOM 8 O4' U B 26 0.359 17.432 -29.992 1.00 32.61 O
ATOM 9 C3' U B 26 -0.306 15.256 -30.459 1.00 33.86 C
ATOM 10 O3' U B 26 0.104 13.900 -30.546 1.00 35.93 O
ATOM 11 C2' U B 26 -0.811 15.597 -29.065 1.00 32.06 C
ATOM 12 O2' U B 26 0.010 15.050 -28.055 1.00 29.83 O
ATOM 13 C1' U B 26 -0.677 17.117 -29.079 1.00 32.30 C
ATOM 14 N1 U B 26 -1.940 17.778 -29.490 1.00 30.57 N
ATOM 15 C2 U B 26 -2.843 18.114 -28.506 1.00 30.69 C
ATOM 16 O2 U B 26 -2.642 17.902 -27.325 1.00 33.89 O
ATOM 17 N3 U B 26 -3.991 18.713 -28.952 1.00 31.16 N
ATOM 18 C4 U B 26 -4.320 19.001 -30.261 1.00 34.90 C
ATOM 19 O4 U B 26 -5.392 19.543 -30.506 1.00 34.77 O
ATOM 20 C5 U B 26 -3.329 18.615 -31.233 1.00 32.80 C
ATOM 21 C6 U B 26 -2.200 18.029 -30.821 1.00 30.95 C
ATOM 22 P G B 27 -0.771 12.881 -31.411 1.00 38.20 P
ATOM 23 OP1 G B 27 -0.058 11.583 -31.428 1.00 35.52 O
ATOM 24 OP2 G B 27 -1.140 13.547 -32.680 1.00 35.29 O
ATOM 25 O5' G B 27 -2.094 12.695 -30.536 1.00 36.22 O
TER
Atoms:
OP1: (-0.058,11.583,-31.428)
OP2: (-1.140,13.547,-32.680)
C3': (-4.574,11.818,-29.164)
C1': (-4.926,13.951,-28.218)
C5': (-2.015,12.083,-29.256)
O6: (-7.446,17.921,-31.929)
O4': (-3.532,13.712,-28.278)
C8: (-4.785,14.871,-30.577)
C2: (-8.029,16.986,-28.542)
C6: (-7.293,17.315,-30.860)
C5: (-6.347,16.310,-30.559)
C4: (-6.341,15.755,-29.300)
P: (-0.771,12.881,-31.411)
C4': (-3.302,12.294,-28.478)
C2': (-5.610,12.592,-28.353)
O2': (-5.859,12.020,-27.082)
N1: (-8.112,17.600,-29.769)
N2: (-8.907,17.392,-27.610)
N3: (-7.146,16.041,-28.248)
N7: (-5.361,15.745,-31.356)
N9: (-5.323,14.828,-29.313)
O5': (-2.094,12.695,-30.536)
O3': (-4.728,10.407,-29.033)
OP2: (-1.140,13.547,-32.680)
C3': (-4.574,11.818,-29.164)
C1': (-4.926,13.951,-28.218)
C5': (-2.015,12.083,-29.256)
O6: (-7.446,17.921,-31.929)
O4': (-3.532,13.712,-28.278)
C8: (-4.785,14.871,-30.577)
C2: (-8.029,16.986,-28.542)
C6: (-7.293,17.315,-30.860)
C5: (-6.347,16.310,-30.559)
C4: (-6.341,15.755,-29.300)
P: (-0.771,12.881,-31.411)
C4': (-3.302,12.294,-28.478)
C2': (-5.610,12.592,-28.353)
O2': (-5.859,12.020,-27.082)
N1: (-8.112,17.600,-29.769)
N2: (-8.907,17.392,-27.610)
N3: (-7.146,16.041,-28.248)
N7: (-5.361,15.745,-31.356)
N9: (-5.323,14.828,-29.313)
O5': (-2.094,12.695,-30.536)
O3': (-4.728,10.407,-29.033)
C4: (-4.320,19.001,-30.261)
N3: (-3.991,18.713,-28.952)
OP1: (1.644,16.653,-34.910)
OP2: (-0.637,17.838,-34.880)
C2: (-2.843,18.114,-28.506)
C1': (-0.677,17.117,-29.079)
C3': (-0.306,15.256,-30.459)
O5': (0.338,16.838,-32.807)
O4': (0.359,17.432,-29.992)
C5': (1.403,16.450,-31.950)
P: (0.649,17.509,-34.226)
C4': (0.882,16.199,-30.548)
C2': (-0.811,15.597,-29.065)
O2': (0.010,15.050,-28.055)
N1: (-1.940,17.778,-29.490)
O4: (-5.392,19.543,-30.506)
O2: (-2.642,17.902,-27.325)
C6: (-2.200,18.029,-30.821)
C5: (-3.329,18.615,-31.233)
O3': (0.104,13.900,-30.546)
N3: (-3.991,18.713,-28.952)
OP1: (1.644,16.653,-34.910)
OP2: (-0.637,17.838,-34.880)
C2: (-2.843,18.114,-28.506)
C1': (-0.677,17.117,-29.079)
C3': (-0.306,15.256,-30.459)
O5': (0.338,16.838,-32.807)
O4': (0.359,17.432,-29.992)
C5': (1.403,16.450,-31.950)
P: (0.649,17.509,-34.226)
C4': (0.882,16.199,-30.548)
C2': (-0.811,15.597,-29.065)
O2': (0.010,15.050,-28.055)
N1: (-1.940,17.778,-29.490)
O4: (-5.392,19.543,-30.506)
O2: (-2.642,17.902,-27.325)
C6: (-2.200,18.029,-30.821)
C5: (-3.329,18.615,-31.233)
O3': (0.104,13.900,-30.546)
Image (generated by PyMOL):