Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01239:01237
Extra
PDB:
ATOM 1 O3' U A1238 12.274 94.993 66.060 1.00104.46 O
ATOM 2 P A A1239 10.674 95.071 65.896 1.00104.25 P
ATOM 3 OP1 A A1239 10.161 95.963 66.965 1.00104.86 O
ATOM 4 OP2 A A1239 10.153 93.685 65.788 1.00105.20 O
ATOM 5 O5' A A1239 10.438 95.794 64.496 1.00101.33 O
ATOM 6 C5' A A1239 10.359 97.230 64.398 1.00 97.70 C
ATOM 7 C4' A A1239 8.926 97.660 64.178 1.00 95.45 C
ATOM 8 O4' A A1239 8.364 96.895 63.077 1.00 95.42 O
ATOM 9 C3' A A1239 7.973 97.397 65.331 1.00 94.13 C
ATOM 10 O3' A A1239 8.034 98.444 66.292 1.00 93.88 O
ATOM 11 C2' A A1239 6.623 97.339 64.627 1.00 94.04 C
ATOM 12 O2' A A1239 6.107 98.615 64.302 1.00 94.03 O
ATOM 13 C1' A A1239 6.996 96.607 63.337 1.00 93.07 C
ATOM 14 N9 A A1239 6.847 95.154 63.453 1.00 90.37 N
ATOM 15 C8 A A1239 7.841 94.210 63.543 1.00 89.66 C
ATOM 16 N7 A A1239 7.398 92.983 63.654 1.00 88.40 N
ATOM 17 C5 A A1239 6.019 93.125 63.635 1.00 87.61 C
ATOM 18 C6 A A1239 4.977 92.193 63.725 1.00 86.50 C
ATOM 19 N6 A A1239 5.171 90.881 63.861 1.00 85.49 N
ATOM 20 N1 A A1239 3.711 92.659 63.673 1.00 86.68 N
ATOM 21 C2 A A1239 3.520 93.978 63.541 1.00 87.69 C
ATOM 22 N3 A A1239 4.419 94.955 63.449 1.00 88.37 N
ATOM 23 C4 A A1239 5.665 94.456 63.504 1.00 88.59 C
ATOM 24 P C A1240 7.402 98.227 67.756 1.00 94.01 P
ATOM 25 OP1 C A1240 7.459 99.530 68.470 1.00 94.11 O
ATOM 26 OP2 C A1240 8.000 97.016 68.385 1.00 93.40 O
ATOM 27 O5' C A1240 5.869 97.917 67.481 1.00 90.98 O
TER
ATOM 1 O3' C B1236 10.353 87.141 58.693 1.00 60.94 O
ATOM 2 P A B1237 10.391 87.112 60.293 1.00 60.32 P
ATOM 3 OP1 A B1237 11.593 86.340 60.676 1.00 59.83 O
ATOM 4 OP2 A B1237 9.059 86.706 60.802 1.00 61.11 O
ATOM 5 O5' A B1237 10.608 88.634 60.696 1.00 64.77 O
ATOM 6 C5' A B1237 11.874 89.286 60.484 1.00 68.72 C
ATOM 7 C4' A B1237 11.781 90.727 60.905 1.00 72.00 C
ATOM 8 O4' A B1237 10.872 91.424 60.018 1.00 72.35 O
ATOM 9 C3' A B1237 11.190 90.942 62.287 1.00 75.18 C
ATOM 10 O3' A B1237 12.178 90.793 63.291 1.00 82.28 O
ATOM 11 C2' A B1237 10.655 92.362 62.196 1.00 74.13 C
ATOM 12 O2' A B1237 11.656 93.342 62.370 1.00 74.39 O
ATOM 13 C1' A B1237 10.144 92.394 60.752 1.00 73.42 C
ATOM 14 N9 A B1237 8.724 92.071 60.650 1.00 73.05 N
ATOM 15 C8 A B1237 8.126 90.837 60.709 1.00 72.55 C
ATOM 16 N7 A B1237 6.821 90.879 60.618 1.00 72.72 N
ATOM 17 C5 A B1237 6.540 92.230 60.484 1.00 73.23 C
ATOM 18 C6 A B1237 5.333 92.936 60.356 1.00 73.94 C
ATOM 19 N6 A B1237 4.131 92.355 60.353 1.00 74.07 N
ATOM 20 N1 A B1237 5.401 94.279 60.236 1.00 74.51 N
ATOM 21 C2 A B1237 6.607 94.863 60.251 1.00 74.64 C
ATOM 22 N3 A B1237 7.810 94.308 60.374 1.00 73.70 N
ATOM 23 C4 A B1237 7.704 92.974 60.489 1.00 73.29 C
ATOM 24 P U B1238 11.783 90.184 64.726 1.00 88.10 P
ATOM 25 OP1 U B1238 11.888 88.700 64.624 1.00 85.41 O
ATOM 26 OP2 U B1238 10.502 90.802 65.170 1.00 87.26 O
ATOM 27 O5' U B1238 12.967 90.705 65.665 1.00 93.47 O
TER
ATOM 2 P A A1239 10.674 95.071 65.896 1.00104.25 P
ATOM 3 OP1 A A1239 10.161 95.963 66.965 1.00104.86 O
ATOM 4 OP2 A A1239 10.153 93.685 65.788 1.00105.20 O
ATOM 5 O5' A A1239 10.438 95.794 64.496 1.00101.33 O
ATOM 6 C5' A A1239 10.359 97.230 64.398 1.00 97.70 C
ATOM 7 C4' A A1239 8.926 97.660 64.178 1.00 95.45 C
ATOM 8 O4' A A1239 8.364 96.895 63.077 1.00 95.42 O
ATOM 9 C3' A A1239 7.973 97.397 65.331 1.00 94.13 C
ATOM 10 O3' A A1239 8.034 98.444 66.292 1.00 93.88 O
ATOM 11 C2' A A1239 6.623 97.339 64.627 1.00 94.04 C
ATOM 12 O2' A A1239 6.107 98.615 64.302 1.00 94.03 O
ATOM 13 C1' A A1239 6.996 96.607 63.337 1.00 93.07 C
ATOM 14 N9 A A1239 6.847 95.154 63.453 1.00 90.37 N
ATOM 15 C8 A A1239 7.841 94.210 63.543 1.00 89.66 C
ATOM 16 N7 A A1239 7.398 92.983 63.654 1.00 88.40 N
ATOM 17 C5 A A1239 6.019 93.125 63.635 1.00 87.61 C
ATOM 18 C6 A A1239 4.977 92.193 63.725 1.00 86.50 C
ATOM 19 N6 A A1239 5.171 90.881 63.861 1.00 85.49 N
ATOM 20 N1 A A1239 3.711 92.659 63.673 1.00 86.68 N
ATOM 21 C2 A A1239 3.520 93.978 63.541 1.00 87.69 C
ATOM 22 N3 A A1239 4.419 94.955 63.449 1.00 88.37 N
ATOM 23 C4 A A1239 5.665 94.456 63.504 1.00 88.59 C
ATOM 24 P C A1240 7.402 98.227 67.756 1.00 94.01 P
ATOM 25 OP1 C A1240 7.459 99.530 68.470 1.00 94.11 O
ATOM 26 OP2 C A1240 8.000 97.016 68.385 1.00 93.40 O
ATOM 27 O5' C A1240 5.869 97.917 67.481 1.00 90.98 O
TER
ATOM 1 O3' C B1236 10.353 87.141 58.693 1.00 60.94 O
ATOM 2 P A B1237 10.391 87.112 60.293 1.00 60.32 P
ATOM 3 OP1 A B1237 11.593 86.340 60.676 1.00 59.83 O
ATOM 4 OP2 A B1237 9.059 86.706 60.802 1.00 61.11 O
ATOM 5 O5' A B1237 10.608 88.634 60.696 1.00 64.77 O
ATOM 6 C5' A B1237 11.874 89.286 60.484 1.00 68.72 C
ATOM 7 C4' A B1237 11.781 90.727 60.905 1.00 72.00 C
ATOM 8 O4' A B1237 10.872 91.424 60.018 1.00 72.35 O
ATOM 9 C3' A B1237 11.190 90.942 62.287 1.00 75.18 C
ATOM 10 O3' A B1237 12.178 90.793 63.291 1.00 82.28 O
ATOM 11 C2' A B1237 10.655 92.362 62.196 1.00 74.13 C
ATOM 12 O2' A B1237 11.656 93.342 62.370 1.00 74.39 O
ATOM 13 C1' A B1237 10.144 92.394 60.752 1.00 73.42 C
ATOM 14 N9 A B1237 8.724 92.071 60.650 1.00 73.05 N
ATOM 15 C8 A B1237 8.126 90.837 60.709 1.00 72.55 C
ATOM 16 N7 A B1237 6.821 90.879 60.618 1.00 72.72 N
ATOM 17 C5 A B1237 6.540 92.230 60.484 1.00 73.23 C
ATOM 18 C6 A B1237 5.333 92.936 60.356 1.00 73.94 C
ATOM 19 N6 A B1237 4.131 92.355 60.353 1.00 74.07 N
ATOM 20 N1 A B1237 5.401 94.279 60.236 1.00 74.51 N
ATOM 21 C2 A B1237 6.607 94.863 60.251 1.00 74.64 C
ATOM 22 N3 A B1237 7.810 94.308 60.374 1.00 73.70 N
ATOM 23 C4 A B1237 7.704 92.974 60.489 1.00 73.29 C
ATOM 24 P U B1238 11.783 90.184 64.726 1.00 88.10 P
ATOM 25 OP1 U B1238 11.888 88.700 64.624 1.00 85.41 O
ATOM 26 OP2 U B1238 10.502 90.802 65.170 1.00 87.26 O
ATOM 27 O5' U B1238 12.967 90.705 65.665 1.00 93.47 O
TER
Atoms:
OP1: (10.161,95.963,66.965)
OP2: (10.153,93.685,65.788)
C3': (7.973,97.397,65.331)
C1': (6.996,96.607,63.337)
C5': (10.359,97.230,64.398)
O4': (8.364,96.895,63.077)
C8: (7.841,94.210,63.543)
O2': (6.107,98.615,64.302)
C6: (4.977,92.193,63.725)
C5: (6.019,93.125,63.635)
C4: (5.665,94.456,63.504)
P: (10.674,95.071,65.896)
C4': (8.926,97.660,64.178)
C2': (6.623,97.339,64.627)
C2: (3.520,93.978,63.541)
N1: (3.711,92.659,63.673)
N3: (4.419,94.955,63.449)
N6: (5.171,90.881,63.861)
N7: (7.398,92.983,63.654)
N9: (6.847,95.154,63.453)
O5': (10.438,95.794,64.496)
O3': (8.034,98.444,66.292)
OP2: (10.153,93.685,65.788)
C3': (7.973,97.397,65.331)
C1': (6.996,96.607,63.337)
C5': (10.359,97.230,64.398)
O4': (8.364,96.895,63.077)
C8: (7.841,94.210,63.543)
O2': (6.107,98.615,64.302)
C6: (4.977,92.193,63.725)
C5: (6.019,93.125,63.635)
C4: (5.665,94.456,63.504)
P: (10.674,95.071,65.896)
C4': (8.926,97.660,64.178)
C2': (6.623,97.339,64.627)
C2: (3.520,93.978,63.541)
N1: (3.711,92.659,63.673)
N3: (4.419,94.955,63.449)
N6: (5.171,90.881,63.861)
N7: (7.398,92.983,63.654)
N9: (6.847,95.154,63.453)
O5': (10.438,95.794,64.496)
O3': (8.034,98.444,66.292)
OP1: (11.593,86.340,60.676)
OP2: (9.059,86.706,60.802)
C3': (11.190,90.942,62.287)
C1': (10.144,92.394,60.752)
C5': (11.874,89.286,60.484)
O4': (10.872,91.424,60.018)
C8: (8.126,90.837,60.709)
O2': (11.656,93.342,62.370)
C6: (5.333,92.936,60.356)
C5: (6.540,92.230,60.484)
C4: (7.704,92.974,60.489)
P: (10.391,87.112,60.293)
C4': (11.781,90.727,60.905)
C2': (10.655,92.362,62.196)
C2: (6.607,94.863,60.251)
N1: (5.401,94.279,60.236)
N3: (7.810,94.308,60.374)
N6: (4.131,92.355,60.353)
N7: (6.821,90.879,60.618)
N9: (8.724,92.071,60.650)
O5': (10.608,88.634,60.696)
O3': (12.178,90.793,63.291)
OP2: (9.059,86.706,60.802)
C3': (11.190,90.942,62.287)
C1': (10.144,92.394,60.752)
C5': (11.874,89.286,60.484)
O4': (10.872,91.424,60.018)
C8: (8.126,90.837,60.709)
O2': (11.656,93.342,62.370)
C6: (5.333,92.936,60.356)
C5: (6.540,92.230,60.484)
C4: (7.704,92.974,60.489)
P: (10.391,87.112,60.293)
C4': (11.781,90.727,60.905)
C2': (10.655,92.362,62.196)
C2: (6.607,94.863,60.251)
N1: (5.401,94.279,60.236)
N3: (7.810,94.308,60.374)
N6: (4.131,92.355,60.353)
N7: (6.821,90.879,60.618)
N9: (8.724,92.071,60.650)
O5': (10.608,88.634,60.696)
O3': (12.178,90.793,63.291)
Image (generated by PyMOL):