Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1112:1111
Extra
PDB:
ATOM 1 O3' A A 111 48.397 -45.031 142.995 1.00 61.31 O
ATOM 2 P A A 112 48.579 -45.917 144.326 1.00 56.11 P
ATOM 3 OP1 A A 112 47.698 -45.335 145.362 1.00 56.41 O
ATOM 4 OP2 A A 112 50.038 -46.008 144.587 1.00 56.40 O
ATOM 5 O5' A A 112 48.012 -47.321 143.877 1.00 56.13 O
ATOM 6 C5' A A 112 46.667 -47.449 143.473 1.00 55.84 C
ATOM 7 C4' A A 112 46.425 -48.784 142.860 1.00 55.82 C
ATOM 8 O4' A A 112 47.097 -48.868 141.582 1.00 55.29 O
ATOM 9 C3' A A 112 46.958 -49.948 143.645 1.00 56.51 C
ATOM 10 O3' A A 112 46.060 -50.301 144.690 1.00 57.02 O
ATOM 11 C2' A A 112 47.145 -51.007 142.561 1.00 56.26 C
ATOM 12 O2' A A 112 45.885 -51.581 142.202 1.00 56.12 O
ATOM 13 C1' A A 112 47.629 -50.148 141.391 1.00 55.55 C
ATOM 14 N9 A A 112 49.097 -50.008 141.347 1.00 55.64 N
ATOM 15 C8 A A 112 49.834 -49.019 141.957 1.00 55.77 C
ATOM 16 N7 A A 112 51.127 -49.086 141.751 1.00 55.83 N
ATOM 17 C5 A A 112 51.280 -50.178 140.906 1.00 55.70 C
ATOM 18 C6 A A 112 52.413 -50.807 140.321 1.00 55.70 C
ATOM 19 N6 A A 112 53.713 -50.467 140.454 1.00 55.84 N
ATOM 20 N1 A A 112 52.164 -51.884 139.563 1.00 55.59 N
ATOM 21 C2 A A 112 50.915 -52.294 139.402 1.00 55.48 C
ATOM 22 N3 A A 112 49.779 -51.802 139.891 1.00 55.46 N
ATOM 23 C4 A A 112 50.029 -50.737 140.652 1.00 55.58 C
ATOM 24 P A A 113 46.149 -51.711 145.453 1.00 71.16 P
ATOM 25 OP1 A A 113 45.776 -52.778 144.476 1.00 70.91 O
ATOM 26 OP2 A A 113 45.340 -51.559 146.694 1.00 71.66 O
ATOM 27 O5' A A 113 47.689 -51.833 145.829 1.00 71.52 O
TER
ATOM 1 O3' C B 110 53.819 -42.618 141.877 1.00 60.36 O
ATOM 2 P A B 111 53.153 -43.563 142.977 1.00 61.52 P
ATOM 3 OP1 A B 111 52.758 -42.697 144.085 1.00 61.85 O
ATOM 4 OP2 A B 111 54.093 -44.687 143.226 1.00 61.98 O
ATOM 5 O5' A B 111 51.860 -44.101 142.266 1.00 61.14 O
ATOM 6 C5' A B 111 50.786 -43.227 142.019 1.00 60.73 C
ATOM 7 C4' A B 111 49.698 -43.921 141.287 1.00 60.40 C
ATOM 8 O4' A B 111 50.155 -44.291 139.970 1.00 59.91 O
ATOM 9 C3' A B 111 49.256 -45.222 141.888 1.00 60.91 C
ATOM 10 O3' A B 111 48.397 -45.031 142.995 1.00 61.31 O
ATOM 11 C2' A B 111 48.588 -45.909 140.714 1.00 60.43 C
ATOM 12 O2' A B 111 47.256 -45.442 140.583 1.00 60.15 O
ATOM 13 C1' A B 111 49.410 -45.387 139.522 1.00 59.85 C
ATOM 14 N9 A B 111 50.329 -46.401 138.968 1.00 59.90 N
ATOM 15 C8 A B 111 51.674 -46.583 139.186 1.00 60.18 C
ATOM 16 N7 A B 111 52.179 -47.614 138.547 1.00 60.17 N
ATOM 17 C5 A B 111 51.106 -48.117 137.843 1.00 59.85 C
ATOM 18 C6 A B 111 50.984 -49.185 136.957 1.00 59.68 C
ATOM 19 N6 A B 111 52.003 -49.972 136.596 1.00 59.82 N
ATOM 20 N1 A B 111 49.746 -49.424 136.450 1.00 59.39 N
ATOM 21 C2 A B 111 48.717 -48.640 136.771 1.00 59.25 C
ATOM 22 N3 A B 111 48.712 -47.597 137.585 1.00 59.37 N
ATOM 23 C4 A B 111 49.956 -47.388 138.088 1.00 59.68 C
ATOM 24 P A B 112 48.579 -45.917 144.326 1.00 56.11 P
ATOM 25 OP1 A B 112 47.698 -45.335 145.362 1.00 56.41 O
ATOM 26 OP2 A B 112 50.038 -46.008 144.587 1.00 56.40 O
ATOM 27 O5' A B 112 48.012 -47.321 143.877 1.00 56.13 O
TER
ATOM 2 P A A 112 48.579 -45.917 144.326 1.00 56.11 P
ATOM 3 OP1 A A 112 47.698 -45.335 145.362 1.00 56.41 O
ATOM 4 OP2 A A 112 50.038 -46.008 144.587 1.00 56.40 O
ATOM 5 O5' A A 112 48.012 -47.321 143.877 1.00 56.13 O
ATOM 6 C5' A A 112 46.667 -47.449 143.473 1.00 55.84 C
ATOM 7 C4' A A 112 46.425 -48.784 142.860 1.00 55.82 C
ATOM 8 O4' A A 112 47.097 -48.868 141.582 1.00 55.29 O
ATOM 9 C3' A A 112 46.958 -49.948 143.645 1.00 56.51 C
ATOM 10 O3' A A 112 46.060 -50.301 144.690 1.00 57.02 O
ATOM 11 C2' A A 112 47.145 -51.007 142.561 1.00 56.26 C
ATOM 12 O2' A A 112 45.885 -51.581 142.202 1.00 56.12 O
ATOM 13 C1' A A 112 47.629 -50.148 141.391 1.00 55.55 C
ATOM 14 N9 A A 112 49.097 -50.008 141.347 1.00 55.64 N
ATOM 15 C8 A A 112 49.834 -49.019 141.957 1.00 55.77 C
ATOM 16 N7 A A 112 51.127 -49.086 141.751 1.00 55.83 N
ATOM 17 C5 A A 112 51.280 -50.178 140.906 1.00 55.70 C
ATOM 18 C6 A A 112 52.413 -50.807 140.321 1.00 55.70 C
ATOM 19 N6 A A 112 53.713 -50.467 140.454 1.00 55.84 N
ATOM 20 N1 A A 112 52.164 -51.884 139.563 1.00 55.59 N
ATOM 21 C2 A A 112 50.915 -52.294 139.402 1.00 55.48 C
ATOM 22 N3 A A 112 49.779 -51.802 139.891 1.00 55.46 N
ATOM 23 C4 A A 112 50.029 -50.737 140.652 1.00 55.58 C
ATOM 24 P A A 113 46.149 -51.711 145.453 1.00 71.16 P
ATOM 25 OP1 A A 113 45.776 -52.778 144.476 1.00 70.91 O
ATOM 26 OP2 A A 113 45.340 -51.559 146.694 1.00 71.66 O
ATOM 27 O5' A A 113 47.689 -51.833 145.829 1.00 71.52 O
TER
ATOM 1 O3' C B 110 53.819 -42.618 141.877 1.00 60.36 O
ATOM 2 P A B 111 53.153 -43.563 142.977 1.00 61.52 P
ATOM 3 OP1 A B 111 52.758 -42.697 144.085 1.00 61.85 O
ATOM 4 OP2 A B 111 54.093 -44.687 143.226 1.00 61.98 O
ATOM 5 O5' A B 111 51.860 -44.101 142.266 1.00 61.14 O
ATOM 6 C5' A B 111 50.786 -43.227 142.019 1.00 60.73 C
ATOM 7 C4' A B 111 49.698 -43.921 141.287 1.00 60.40 C
ATOM 8 O4' A B 111 50.155 -44.291 139.970 1.00 59.91 O
ATOM 9 C3' A B 111 49.256 -45.222 141.888 1.00 60.91 C
ATOM 10 O3' A B 111 48.397 -45.031 142.995 1.00 61.31 O
ATOM 11 C2' A B 111 48.588 -45.909 140.714 1.00 60.43 C
ATOM 12 O2' A B 111 47.256 -45.442 140.583 1.00 60.15 O
ATOM 13 C1' A B 111 49.410 -45.387 139.522 1.00 59.85 C
ATOM 14 N9 A B 111 50.329 -46.401 138.968 1.00 59.90 N
ATOM 15 C8 A B 111 51.674 -46.583 139.186 1.00 60.18 C
ATOM 16 N7 A B 111 52.179 -47.614 138.547 1.00 60.17 N
ATOM 17 C5 A B 111 51.106 -48.117 137.843 1.00 59.85 C
ATOM 18 C6 A B 111 50.984 -49.185 136.957 1.00 59.68 C
ATOM 19 N6 A B 111 52.003 -49.972 136.596 1.00 59.82 N
ATOM 20 N1 A B 111 49.746 -49.424 136.450 1.00 59.39 N
ATOM 21 C2 A B 111 48.717 -48.640 136.771 1.00 59.25 C
ATOM 22 N3 A B 111 48.712 -47.597 137.585 1.00 59.37 N
ATOM 23 C4 A B 111 49.956 -47.388 138.088 1.00 59.68 C
ATOM 24 P A B 112 48.579 -45.917 144.326 1.00 56.11 P
ATOM 25 OP1 A B 112 47.698 -45.335 145.362 1.00 56.41 O
ATOM 26 OP2 A B 112 50.038 -46.008 144.587 1.00 56.40 O
ATOM 27 O5' A B 112 48.012 -47.321 143.877 1.00 56.13 O
TER
Atoms:
OP1: (47.698,-45.335,145.362)
OP2: (50.038,-46.008,144.587)
C3': (46.958,-49.948,143.645)
C1': (47.629,-50.148,141.391)
C5': (46.667,-47.449,143.473)
O4': (47.097,-48.868,141.582)
C8: (49.834,-49.019,141.957)
O2': (45.885,-51.581,142.202)
C6: (52.413,-50.807,140.321)
C5: (51.280,-50.178,140.906)
C4: (50.029,-50.737,140.652)
P: (48.579,-45.917,144.326)
C4': (46.425,-48.784,142.860)
C2': (47.145,-51.007,142.561)
C2: (50.915,-52.294,139.402)
N1: (52.164,-51.884,139.563)
N3: (49.779,-51.802,139.891)
N6: (53.713,-50.467,140.454)
N7: (51.127,-49.086,141.751)
N9: (49.097,-50.008,141.347)
O5': (48.012,-47.321,143.877)
O3': (46.060,-50.301,144.690)
OP2: (50.038,-46.008,144.587)
C3': (46.958,-49.948,143.645)
C1': (47.629,-50.148,141.391)
C5': (46.667,-47.449,143.473)
O4': (47.097,-48.868,141.582)
C8: (49.834,-49.019,141.957)
O2': (45.885,-51.581,142.202)
C6: (52.413,-50.807,140.321)
C5: (51.280,-50.178,140.906)
C4: (50.029,-50.737,140.652)
P: (48.579,-45.917,144.326)
C4': (46.425,-48.784,142.860)
C2': (47.145,-51.007,142.561)
C2: (50.915,-52.294,139.402)
N1: (52.164,-51.884,139.563)
N3: (49.779,-51.802,139.891)
N6: (53.713,-50.467,140.454)
N7: (51.127,-49.086,141.751)
N9: (49.097,-50.008,141.347)
O5': (48.012,-47.321,143.877)
O3': (46.060,-50.301,144.690)
OP1: (52.758,-42.697,144.085)
OP2: (54.093,-44.687,143.226)
C3': (49.256,-45.222,141.888)
C1': (49.410,-45.387,139.522)
C5': (50.786,-43.227,142.019)
O4': (50.155,-44.291,139.970)
C8: (51.674,-46.583,139.186)
O2': (47.256,-45.442,140.583)
C6: (50.984,-49.185,136.957)
C5: (51.106,-48.117,137.843)
C4: (49.956,-47.388,138.088)
P: (53.153,-43.563,142.977)
C4': (49.698,-43.921,141.287)
C2': (48.588,-45.909,140.714)
C2: (48.717,-48.640,136.771)
N1: (49.746,-49.424,136.450)
N3: (48.712,-47.597,137.585)
N6: (52.003,-49.972,136.596)
N7: (52.179,-47.614,138.547)
N9: (50.329,-46.401,138.968)
O5': (51.860,-44.101,142.266)
O3': (48.397,-45.031,142.995)
OP2: (54.093,-44.687,143.226)
C3': (49.256,-45.222,141.888)
C1': (49.410,-45.387,139.522)
C5': (50.786,-43.227,142.019)
O4': (50.155,-44.291,139.970)
C8: (51.674,-46.583,139.186)
O2': (47.256,-45.442,140.583)
C6: (50.984,-49.185,136.957)
C5: (51.106,-48.117,137.843)
C4: (49.956,-47.388,138.088)
P: (53.153,-43.563,142.977)
C4': (49.698,-43.921,141.287)
C2': (48.588,-45.909,140.714)
C2: (48.717,-48.640,136.771)
N1: (49.746,-49.424,136.450)
N3: (48.712,-47.597,137.585)
N6: (52.003,-49.972,136.596)
N7: (52.179,-47.614,138.547)
N9: (50.329,-46.401,138.968)
O5': (51.860,-44.101,142.266)
O3': (48.397,-45.031,142.995)
Image (generated by PyMOL):