Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:Y4:Y3
Extra
PDB:
ATOM 1 O3' A A 3 198.695 91.547 4.881 1.00100.94 O
ATOM 2 P A A 4 199.863 90.536 4.458 1.00102.56 P
ATOM 3 OP1 A A 4 199.486 89.203 5.027 1.00102.16 O
ATOM 4 OP2 A A 4 201.169 91.158 4.800 1.00102.22 O
ATOM 5 O5' A A 4 199.732 90.465 2.880 1.00103.88 O
ATOM 6 C5' A A 4 198.585 89.847 2.260 1.00106.08 C
ATOM 7 C4' A A 4 198.636 90.037 0.764 1.00107.35 C
ATOM 8 O4' A A 4 198.472 91.442 0.456 1.00106.77 O
ATOM 9 C3' A A 4 199.951 89.643 0.114 1.00108.70 C
ATOM 10 O3' A A 4 199.986 88.252 -0.169 1.00111.86 O
ATOM 11 C2' A A 4 199.992 90.523 -1.130 1.00107.62 C
ATOM 12 O2' A A 4 199.266 89.987 -2.216 1.00107.69 O
ATOM 13 C1' A A 4 199.301 91.795 -0.633 1.00106.55 C
ATOM 14 N9 A A 4 200.246 92.809 -0.166 1.00105.64 N
ATOM 15 C8 A A 4 200.532 93.168 1.132 1.00104.94 C
ATOM 16 N7 A A 4 201.445 94.102 1.232 1.00104.66 N
ATOM 17 C5 A A 4 201.782 94.382 -0.087 1.00104.81 C
ATOM 18 C6 A A 4 202.702 95.282 -0.661 1.00104.42 C
ATOM 19 N6 A A 4 203.479 96.105 0.050 1.00104.34 N
ATOM 20 N1 A A 4 202.798 95.307 -2.010 1.00104.21 N
ATOM 21 C2 A A 4 202.017 94.486 -2.724 1.00104.39 C
ATOM 22 N3 A A 4 201.115 93.601 -2.302 1.00104.61 N
ATOM 23 C4 A A 4 201.046 93.597 -0.958 1.00105.23 C
ATOM 24 P A A 5 201.391 87.473 -0.157 1.00114.39 P
ATOM 25 OP1 A A 5 201.070 86.014 -0.112 1.00114.22 O
ATOM 26 OP2 A A 5 202.249 88.072 0.898 1.00113.88 O
ATOM 27 O5' A A 5 201.997 87.807 -1.593 1.00117.02 O
TER
ATOM 1 O3' A B 2 198.513 96.137 9.528 1.00 99.80 O
ATOM 2 P A B 3 199.636 95.002 9.338 1.00 99.33 P
ATOM 3 OP1 A B 3 199.765 94.268 10.638 1.00 99.23 O
ATOM 4 OP2 A B 3 200.830 95.636 8.720 1.00 98.81 O
ATOM 5 O5' A B 3 198.966 94.006 8.307 1.00 99.21 O
ATOM 6 C5' A B 3 199.561 93.734 7.030 1.00 98.81 C
ATOM 7 C4' A B 3 198.488 93.662 5.975 1.00 98.55 C
ATOM 8 O4' A B 3 198.149 95.000 5.530 1.00 97.83 O
ATOM 9 C3' A B 3 198.880 92.933 4.708 1.00 98.92 C
ATOM 10 O3' A B 3 198.695 91.547 4.881 1.00100.94 O
ATOM 11 C2' A B 3 197.935 93.527 3.671 1.00 98.03 C
ATOM 12 O2' A B 3 196.649 92.934 3.695 1.00 96.99 O
ATOM 13 C1' A B 3 197.831 94.977 4.148 1.00 97.30 C
ATOM 14 N9 A B 3 198.732 95.895 3.441 1.00 96.26 N
ATOM 15 C8 A B 3 199.639 96.779 3.979 1.00 96.23 C
ATOM 16 N7 A B 3 200.284 97.487 3.083 1.00 95.11 N
ATOM 17 C5 A B 3 199.774 97.036 1.874 1.00 94.78 C
ATOM 18 C6 A B 3 200.048 97.389 0.547 1.00 93.99 C
ATOM 19 N6 A B 3 200.940 98.311 0.202 1.00 93.47 N
ATOM 20 N1 A B 3 199.369 96.751 -0.429 1.00 93.78 N
ATOM 21 C2 A B 3 198.483 95.817 -0.083 1.00 94.50 C
ATOM 22 N3 A B 3 198.135 95.395 1.129 1.00 95.74 N
ATOM 23 C4 A B 3 198.824 96.053 2.077 1.00 95.44 C
ATOM 24 P A B 4 199.863 90.536 4.458 1.00102.56 P
ATOM 25 OP1 A B 4 199.486 89.203 5.027 1.00102.16 O
ATOM 26 OP2 A B 4 201.169 91.158 4.800 1.00102.22 O
ATOM 27 O5' A B 4 199.732 90.465 2.880 1.00103.88 O
TER
ATOM 2 P A A 4 199.863 90.536 4.458 1.00102.56 P
ATOM 3 OP1 A A 4 199.486 89.203 5.027 1.00102.16 O
ATOM 4 OP2 A A 4 201.169 91.158 4.800 1.00102.22 O
ATOM 5 O5' A A 4 199.732 90.465 2.880 1.00103.88 O
ATOM 6 C5' A A 4 198.585 89.847 2.260 1.00106.08 C
ATOM 7 C4' A A 4 198.636 90.037 0.764 1.00107.35 C
ATOM 8 O4' A A 4 198.472 91.442 0.456 1.00106.77 O
ATOM 9 C3' A A 4 199.951 89.643 0.114 1.00108.70 C
ATOM 10 O3' A A 4 199.986 88.252 -0.169 1.00111.86 O
ATOM 11 C2' A A 4 199.992 90.523 -1.130 1.00107.62 C
ATOM 12 O2' A A 4 199.266 89.987 -2.216 1.00107.69 O
ATOM 13 C1' A A 4 199.301 91.795 -0.633 1.00106.55 C
ATOM 14 N9 A A 4 200.246 92.809 -0.166 1.00105.64 N
ATOM 15 C8 A A 4 200.532 93.168 1.132 1.00104.94 C
ATOM 16 N7 A A 4 201.445 94.102 1.232 1.00104.66 N
ATOM 17 C5 A A 4 201.782 94.382 -0.087 1.00104.81 C
ATOM 18 C6 A A 4 202.702 95.282 -0.661 1.00104.42 C
ATOM 19 N6 A A 4 203.479 96.105 0.050 1.00104.34 N
ATOM 20 N1 A A 4 202.798 95.307 -2.010 1.00104.21 N
ATOM 21 C2 A A 4 202.017 94.486 -2.724 1.00104.39 C
ATOM 22 N3 A A 4 201.115 93.601 -2.302 1.00104.61 N
ATOM 23 C4 A A 4 201.046 93.597 -0.958 1.00105.23 C
ATOM 24 P A A 5 201.391 87.473 -0.157 1.00114.39 P
ATOM 25 OP1 A A 5 201.070 86.014 -0.112 1.00114.22 O
ATOM 26 OP2 A A 5 202.249 88.072 0.898 1.00113.88 O
ATOM 27 O5' A A 5 201.997 87.807 -1.593 1.00117.02 O
TER
ATOM 1 O3' A B 2 198.513 96.137 9.528 1.00 99.80 O
ATOM 2 P A B 3 199.636 95.002 9.338 1.00 99.33 P
ATOM 3 OP1 A B 3 199.765 94.268 10.638 1.00 99.23 O
ATOM 4 OP2 A B 3 200.830 95.636 8.720 1.00 98.81 O
ATOM 5 O5' A B 3 198.966 94.006 8.307 1.00 99.21 O
ATOM 6 C5' A B 3 199.561 93.734 7.030 1.00 98.81 C
ATOM 7 C4' A B 3 198.488 93.662 5.975 1.00 98.55 C
ATOM 8 O4' A B 3 198.149 95.000 5.530 1.00 97.83 O
ATOM 9 C3' A B 3 198.880 92.933 4.708 1.00 98.92 C
ATOM 10 O3' A B 3 198.695 91.547 4.881 1.00100.94 O
ATOM 11 C2' A B 3 197.935 93.527 3.671 1.00 98.03 C
ATOM 12 O2' A B 3 196.649 92.934 3.695 1.00 96.99 O
ATOM 13 C1' A B 3 197.831 94.977 4.148 1.00 97.30 C
ATOM 14 N9 A B 3 198.732 95.895 3.441 1.00 96.26 N
ATOM 15 C8 A B 3 199.639 96.779 3.979 1.00 96.23 C
ATOM 16 N7 A B 3 200.284 97.487 3.083 1.00 95.11 N
ATOM 17 C5 A B 3 199.774 97.036 1.874 1.00 94.78 C
ATOM 18 C6 A B 3 200.048 97.389 0.547 1.00 93.99 C
ATOM 19 N6 A B 3 200.940 98.311 0.202 1.00 93.47 N
ATOM 20 N1 A B 3 199.369 96.751 -0.429 1.00 93.78 N
ATOM 21 C2 A B 3 198.483 95.817 -0.083 1.00 94.50 C
ATOM 22 N3 A B 3 198.135 95.395 1.129 1.00 95.74 N
ATOM 23 C4 A B 3 198.824 96.053 2.077 1.00 95.44 C
ATOM 24 P A B 4 199.863 90.536 4.458 1.00102.56 P
ATOM 25 OP1 A B 4 199.486 89.203 5.027 1.00102.16 O
ATOM 26 OP2 A B 4 201.169 91.158 4.800 1.00102.22 O
ATOM 27 O5' A B 4 199.732 90.465 2.880 1.00103.88 O
TER
Atoms:
OP1: (199.486,89.203,5.027)
OP2: (201.169,91.158,4.800)
C3': (199.951,89.643,0.114)
C1': (199.301,91.795,-0.633)
C5': (198.585,89.847,2.260)
O4': (198.472,91.442,0.456)
C8: (200.532,93.168,1.132)
O2': (199.266,89.987,-2.216)
C6: (202.702,95.282,-0.661)
C5: (201.782,94.382,-0.087)
C4: (201.046,93.597,-0.958)
P: (199.863,90.536,4.458)
C4': (198.636,90.037,0.764)
C2': (199.992,90.523,-1.130)
C2: (202.017,94.486,-2.724)
N1: (202.798,95.307,-2.010)
N3: (201.115,93.601,-2.302)
N6: (203.479,96.105,0.050)
N7: (201.445,94.102,1.232)
N9: (200.246,92.809,-0.166)
O5': (199.732,90.465,2.880)
O3': (199.986,88.252,-0.169)
OP2: (201.169,91.158,4.800)
C3': (199.951,89.643,0.114)
C1': (199.301,91.795,-0.633)
C5': (198.585,89.847,2.260)
O4': (198.472,91.442,0.456)
C8: (200.532,93.168,1.132)
O2': (199.266,89.987,-2.216)
C6: (202.702,95.282,-0.661)
C5: (201.782,94.382,-0.087)
C4: (201.046,93.597,-0.958)
P: (199.863,90.536,4.458)
C4': (198.636,90.037,0.764)
C2': (199.992,90.523,-1.130)
C2: (202.017,94.486,-2.724)
N1: (202.798,95.307,-2.010)
N3: (201.115,93.601,-2.302)
N6: (203.479,96.105,0.050)
N7: (201.445,94.102,1.232)
N9: (200.246,92.809,-0.166)
O5': (199.732,90.465,2.880)
O3': (199.986,88.252,-0.169)
OP1: (199.765,94.268,10.638)
OP2: (200.830,95.636,8.720)
C3': (198.880,92.933,4.708)
C1': (197.831,94.977,4.148)
C5': (199.561,93.734,7.030)
O4': (198.149,95.000,5.530)
C8: (199.639,96.779,3.979)
O2': (196.649,92.934,3.695)
C6: (200.048,97.389,0.547)
C5: (199.774,97.036,1.874)
C4: (198.824,96.053,2.077)
P: (199.636,95.002,9.338)
C4': (198.488,93.662,5.975)
C2': (197.935,93.527,3.671)
C2: (198.483,95.817,-0.083)
N1: (199.369,96.751,-0.429)
N3: (198.135,95.395,1.129)
N6: (200.940,98.311,0.202)
N7: (200.284,97.487,3.083)
N9: (198.732,95.895,3.441)
O5': (198.966,94.006,8.307)
O3': (198.695,91.547,4.881)
OP2: (200.830,95.636,8.720)
C3': (198.880,92.933,4.708)
C1': (197.831,94.977,4.148)
C5': (199.561,93.734,7.030)
O4': (198.149,95.000,5.530)
C8: (199.639,96.779,3.979)
O2': (196.649,92.934,3.695)
C6: (200.048,97.389,0.547)
C5: (199.774,97.036,1.874)
C4: (198.824,96.053,2.077)
P: (199.636,95.002,9.338)
C4': (198.488,93.662,5.975)
C2': (197.935,93.527,3.671)
C2: (198.483,95.817,-0.083)
N1: (199.369,96.751,-0.429)
N3: (198.135,95.395,1.129)
N6: (200.940,98.311,0.202)
N7: (200.284,97.487,3.083)
N9: (198.732,95.895,3.441)
O5': (198.966,94.006,8.307)
O3': (198.695,91.547,4.881)
Image (generated by PyMOL):