Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A1088:A1087
Extra
PDB:
ATOM 1 O3' A A1087 205.202 148.250 -4.238 1.00 56.65 O
ATOM 2 P A A1088 206.226 148.594 -3.049 1.00 57.04 P
ATOM 3 OP1 A A1088 207.378 149.263 -3.725 1.00 56.45 O
ATOM 4 OP2 A A1088 206.443 147.389 -2.204 1.00 54.55 O
ATOM 5 O5' A A1088 205.440 149.663 -2.163 1.00 60.09 O
ATOM 6 C5' A A1088 205.054 150.955 -2.692 1.00 62.33 C
ATOM 7 C4' A A1088 204.241 151.717 -1.663 1.00 64.38 C
ATOM 8 O4' A A1088 202.979 151.024 -1.447 1.00 64.61 O
ATOM 9 C3' A A1088 204.861 151.822 -0.270 1.00 65.67 C
ATOM 10 O3' A A1088 205.816 152.890 -0.132 1.00 66.30 O
ATOM 11 C2' A A1088 203.638 151.993 0.630 1.00 65.47 C
ATOM 12 O2' A A1088 203.178 153.330 0.707 1.00 65.08 O
ATOM 13 C1' A A1088 202.601 151.117 -0.080 1.00 64.78 C
ATOM 14 N9 A A1088 202.547 149.765 0.489 1.00 64.29 N
ATOM 15 C8 A A1088 203.367 148.698 0.202 1.00 64.56 C
ATOM 16 N7 A A1088 203.113 147.627 0.916 1.00 63.99 N
ATOM 17 C5 A A1088 202.045 148.006 1.719 1.00 63.45 C
ATOM 18 C6 A A1088 201.315 147.321 2.714 1.00 62.74 C
ATOM 19 N6 A A1088 201.553 146.057 3.074 1.00 60.62 N
ATOM 20 N1 A A1088 200.317 147.991 3.334 1.00 62.12 N
ATOM 21 C2 A A1088 200.073 149.251 2.972 1.00 62.68 C
ATOM 22 N3 A A1088 200.684 150.002 2.053 1.00 64.41 N
ATOM 23 C4 A A1088 201.677 149.315 1.458 1.00 64.17 C
ATOM 24 P C A1089 206.915 152.833 1.055 1.00 67.38 P
ATOM 25 OP1 C A1089 207.683 154.112 0.964 1.00 66.97 O
ATOM 26 OP2 C A1089 207.648 151.539 1.017 1.00 66.66 O
ATOM 27 O5' C A1089 206.040 152.856 2.401 1.00 67.06 O
TER
ATOM 1 O3' C B1086 203.437 142.298 -4.244 1.00 48.70 O
ATOM 2 P A B1087 204.454 143.192 -3.376 1.00 49.70 P
ATOM 3 OP1 A B1087 205.814 142.980 -3.958 1.00 50.39 O
ATOM 4 OP2 A B1087 204.224 142.896 -1.945 1.00 50.06 O
ATOM 5 O5' A B1087 203.998 144.684 -3.692 1.00 50.06 O
ATOM 6 C5' A B1087 204.169 145.248 -5.006 1.00 52.02 C
ATOM 7 C4' A B1087 203.566 146.633 -5.057 1.00 54.86 C
ATOM 8 O4' A B1087 202.124 146.530 -4.911 1.00 56.15 O
ATOM 9 C3' A B1087 203.995 147.581 -3.945 1.00 55.70 C
ATOM 10 O3' A B1087 205.202 148.250 -4.238 1.00 56.65 O
ATOM 11 C2' A B1087 202.813 148.536 -3.857 1.00 55.81 C
ATOM 12 O2' A B1087 202.838 149.509 -4.883 1.00 56.67 O
ATOM 13 C1' A B1087 201.643 147.584 -4.092 1.00 54.81 C
ATOM 14 N9 A B1087 201.207 146.992 -2.827 1.00 53.70 N
ATOM 15 C8 A B1087 201.708 145.865 -2.206 1.00 52.67 C
ATOM 16 N7 A B1087 201.125 145.585 -1.067 1.00 51.11 N
ATOM 17 C5 A B1087 200.176 146.589 -0.927 1.00 51.48 C
ATOM 18 C6 A B1087 199.228 146.850 0.066 1.00 51.27 C
ATOM 19 N6 A B1087 199.060 146.078 1.145 1.00 52.45 N
ATOM 20 N1 A B1087 198.440 147.936 -0.090 1.00 49.85 N
ATOM 21 C2 A B1087 198.596 148.691 -1.182 1.00 49.78 C
ATOM 22 N3 A B1087 199.445 148.545 -2.191 1.00 50.36 N
ATOM 23 C4 A B1087 200.217 147.462 -2.002 1.00 52.05 C
ATOM 24 P A B1088 206.226 148.594 -3.049 1.00 57.04 P
ATOM 25 OP1 A B1088 207.378 149.263 -3.725 1.00 56.45 O
ATOM 26 OP2 A B1088 206.443 147.389 -2.204 1.00 54.55 O
ATOM 27 O5' A B1088 205.440 149.663 -2.163 1.00 60.09 O
TER
ATOM 2 P A A1088 206.226 148.594 -3.049 1.00 57.04 P
ATOM 3 OP1 A A1088 207.378 149.263 -3.725 1.00 56.45 O
ATOM 4 OP2 A A1088 206.443 147.389 -2.204 1.00 54.55 O
ATOM 5 O5' A A1088 205.440 149.663 -2.163 1.00 60.09 O
ATOM 6 C5' A A1088 205.054 150.955 -2.692 1.00 62.33 C
ATOM 7 C4' A A1088 204.241 151.717 -1.663 1.00 64.38 C
ATOM 8 O4' A A1088 202.979 151.024 -1.447 1.00 64.61 O
ATOM 9 C3' A A1088 204.861 151.822 -0.270 1.00 65.67 C
ATOM 10 O3' A A1088 205.816 152.890 -0.132 1.00 66.30 O
ATOM 11 C2' A A1088 203.638 151.993 0.630 1.00 65.47 C
ATOM 12 O2' A A1088 203.178 153.330 0.707 1.00 65.08 O
ATOM 13 C1' A A1088 202.601 151.117 -0.080 1.00 64.78 C
ATOM 14 N9 A A1088 202.547 149.765 0.489 1.00 64.29 N
ATOM 15 C8 A A1088 203.367 148.698 0.202 1.00 64.56 C
ATOM 16 N7 A A1088 203.113 147.627 0.916 1.00 63.99 N
ATOM 17 C5 A A1088 202.045 148.006 1.719 1.00 63.45 C
ATOM 18 C6 A A1088 201.315 147.321 2.714 1.00 62.74 C
ATOM 19 N6 A A1088 201.553 146.057 3.074 1.00 60.62 N
ATOM 20 N1 A A1088 200.317 147.991 3.334 1.00 62.12 N
ATOM 21 C2 A A1088 200.073 149.251 2.972 1.00 62.68 C
ATOM 22 N3 A A1088 200.684 150.002 2.053 1.00 64.41 N
ATOM 23 C4 A A1088 201.677 149.315 1.458 1.00 64.17 C
ATOM 24 P C A1089 206.915 152.833 1.055 1.00 67.38 P
ATOM 25 OP1 C A1089 207.683 154.112 0.964 1.00 66.97 O
ATOM 26 OP2 C A1089 207.648 151.539 1.017 1.00 66.66 O
ATOM 27 O5' C A1089 206.040 152.856 2.401 1.00 67.06 O
TER
ATOM 1 O3' C B1086 203.437 142.298 -4.244 1.00 48.70 O
ATOM 2 P A B1087 204.454 143.192 -3.376 1.00 49.70 P
ATOM 3 OP1 A B1087 205.814 142.980 -3.958 1.00 50.39 O
ATOM 4 OP2 A B1087 204.224 142.896 -1.945 1.00 50.06 O
ATOM 5 O5' A B1087 203.998 144.684 -3.692 1.00 50.06 O
ATOM 6 C5' A B1087 204.169 145.248 -5.006 1.00 52.02 C
ATOM 7 C4' A B1087 203.566 146.633 -5.057 1.00 54.86 C
ATOM 8 O4' A B1087 202.124 146.530 -4.911 1.00 56.15 O
ATOM 9 C3' A B1087 203.995 147.581 -3.945 1.00 55.70 C
ATOM 10 O3' A B1087 205.202 148.250 -4.238 1.00 56.65 O
ATOM 11 C2' A B1087 202.813 148.536 -3.857 1.00 55.81 C
ATOM 12 O2' A B1087 202.838 149.509 -4.883 1.00 56.67 O
ATOM 13 C1' A B1087 201.643 147.584 -4.092 1.00 54.81 C
ATOM 14 N9 A B1087 201.207 146.992 -2.827 1.00 53.70 N
ATOM 15 C8 A B1087 201.708 145.865 -2.206 1.00 52.67 C
ATOM 16 N7 A B1087 201.125 145.585 -1.067 1.00 51.11 N
ATOM 17 C5 A B1087 200.176 146.589 -0.927 1.00 51.48 C
ATOM 18 C6 A B1087 199.228 146.850 0.066 1.00 51.27 C
ATOM 19 N6 A B1087 199.060 146.078 1.145 1.00 52.45 N
ATOM 20 N1 A B1087 198.440 147.936 -0.090 1.00 49.85 N
ATOM 21 C2 A B1087 198.596 148.691 -1.182 1.00 49.78 C
ATOM 22 N3 A B1087 199.445 148.545 -2.191 1.00 50.36 N
ATOM 23 C4 A B1087 200.217 147.462 -2.002 1.00 52.05 C
ATOM 24 P A B1088 206.226 148.594 -3.049 1.00 57.04 P
ATOM 25 OP1 A B1088 207.378 149.263 -3.725 1.00 56.45 O
ATOM 26 OP2 A B1088 206.443 147.389 -2.204 1.00 54.55 O
ATOM 27 O5' A B1088 205.440 149.663 -2.163 1.00 60.09 O
TER
Atoms:
OP1: (207.378,149.263,-3.725)
OP2: (206.443,147.389,-2.204)
C3': (204.861,151.822,-0.270)
C1': (202.601,151.117,-0.080)
C5': (205.054,150.955,-2.692)
O4': (202.979,151.024,-1.447)
C8: (203.367,148.698,0.202)
O2': (203.178,153.330,0.707)
C6: (201.315,147.321,2.714)
C5: (202.045,148.006,1.719)
C4: (201.677,149.315,1.458)
P: (206.226,148.594,-3.049)
C4': (204.241,151.717,-1.663)
C2': (203.638,151.993,0.630)
C2: (200.073,149.251,2.972)
N1: (200.317,147.991,3.334)
N3: (200.684,150.002,2.053)
N6: (201.553,146.057,3.074)
N7: (203.113,147.627,0.916)
N9: (202.547,149.765,0.489)
O5': (205.440,149.663,-2.163)
O3': (205.816,152.890,-0.132)
OP2: (206.443,147.389,-2.204)
C3': (204.861,151.822,-0.270)
C1': (202.601,151.117,-0.080)
C5': (205.054,150.955,-2.692)
O4': (202.979,151.024,-1.447)
C8: (203.367,148.698,0.202)
O2': (203.178,153.330,0.707)
C6: (201.315,147.321,2.714)
C5: (202.045,148.006,1.719)
C4: (201.677,149.315,1.458)
P: (206.226,148.594,-3.049)
C4': (204.241,151.717,-1.663)
C2': (203.638,151.993,0.630)
C2: (200.073,149.251,2.972)
N1: (200.317,147.991,3.334)
N3: (200.684,150.002,2.053)
N6: (201.553,146.057,3.074)
N7: (203.113,147.627,0.916)
N9: (202.547,149.765,0.489)
O5': (205.440,149.663,-2.163)
O3': (205.816,152.890,-0.132)
OP1: (205.814,142.980,-3.958)
OP2: (204.224,142.896,-1.945)
C3': (203.995,147.581,-3.945)
C1': (201.643,147.584,-4.092)
C5': (204.169,145.248,-5.006)
O4': (202.124,146.530,-4.911)
C8: (201.708,145.865,-2.206)
O2': (202.838,149.509,-4.883)
C6: (199.228,146.850,0.066)
C5: (200.176,146.589,-0.927)
C4: (200.217,147.462,-2.002)
P: (204.454,143.192,-3.376)
C4': (203.566,146.633,-5.057)
C2': (202.813,148.536,-3.857)
C2: (198.596,148.691,-1.182)
N1: (198.440,147.936,-0.090)
N3: (199.445,148.545,-2.191)
N6: (199.060,146.078,1.145)
N7: (201.125,145.585,-1.067)
N9: (201.207,146.992,-2.827)
O5': (203.998,144.684,-3.692)
O3': (205.202,148.250,-4.238)
OP2: (204.224,142.896,-1.945)
C3': (203.995,147.581,-3.945)
C1': (201.643,147.584,-4.092)
C5': (204.169,145.248,-5.006)
O4': (202.124,146.530,-4.911)
C8: (201.708,145.865,-2.206)
O2': (202.838,149.509,-4.883)
C6: (199.228,146.850,0.066)
C5: (200.176,146.589,-0.927)
C4: (200.217,147.462,-2.002)
P: (204.454,143.192,-3.376)
C4': (203.566,146.633,-5.057)
C2': (202.813,148.536,-3.857)
C2: (198.596,148.691,-1.182)
N1: (198.440,147.936,-0.090)
N3: (199.445,148.545,-2.191)
N6: (199.060,146.078,1.145)
N7: (201.125,145.585,-1.067)
N9: (201.207,146.992,-2.827)
O5': (203.998,144.684,-3.692)
O3': (205.202,148.250,-4.238)
Image (generated by PyMOL):