Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YZD:C9:C8
Extra
PDB:
ATOM 1 O3' A A 8 21.821 43.268 26.393 1.00 33.47 O
ATOM 2 P A A 9 21.580 42.440 27.752 1.00 36.10 P
ATOM 3 OP1 A A 9 21.441 43.423 28.859 1.00 36.91 O
ATOM 4 OP2 A A 9 22.587 41.352 27.860 1.00 35.94 O
ATOM 5 O5' A A 9 20.156 41.781 27.508 1.00 34.68 O
ATOM 6 C5' A A 9 19.038 42.603 27.257 1.00 32.82 C
ATOM 7 C4' A A 9 17.877 41.775 26.795 1.00 34.04 C
ATOM 8 O4' A A 9 18.148 41.226 25.475 1.00 32.88 O
ATOM 9 C3' A A 9 17.550 40.546 27.625 1.00 34.84 C
ATOM 10 O3' A A 9 16.840 40.872 28.817 1.00 36.17 O
ATOM 11 C2' A A 9 16.696 39.769 26.635 1.00 33.75 C
ATOM 12 O2' A A 9 15.425 40.357 26.475 1.00 34.26 O
ATOM 13 C1' A A 9 17.498 39.969 25.348 1.00 32.43 C
ATOM 14 N9 A A 9 18.523 38.934 25.223 1.00 30.74 N
ATOM 15 C8 A A 9 19.853 39.010 25.556 1.00 28.20 C
ATOM 16 N7 A A 9 20.513 37.902 25.338 1.00 27.35 N
ATOM 17 C5 A A 9 19.555 37.037 24.827 1.00 27.43 C
ATOM 18 C6 A A 9 19.618 35.701 24.390 1.00 25.40 C
ATOM 19 N6 A A 9 20.734 34.968 24.405 1.00 23.22 N
ATOM 20 N1 A A 9 18.480 35.137 23.935 1.00 26.15 N
ATOM 21 C2 A A 9 17.359 35.866 23.930 1.00 27.73 C
ATOM 22 N3 A A 9 17.173 37.125 24.314 1.00 28.28 N
ATOM 23 C4 A A 9 18.325 37.661 24.752 1.00 27.86 C
ATOM 24 P G A 10 17.162 40.069 30.176 1.00 38.57 P
ATOM 25 OP1 G A 10 16.434 40.789 31.255 1.00 38.96 O
ATOM 26 OP2 G A 10 18.628 39.872 30.290 1.00 38.05 O
ATOM 27 O5' G A 10 16.482 38.645 29.935 1.00 35.90 O
TER
ATOM 1 O3' U B 7 27.224 42.625 23.863 1.00 24.59 O
ATOM 2 P A B 8 26.634 42.095 25.258 1.00 25.35 P
ATOM 3 OP1 A B 8 27.074 43.068 26.291 1.00 28.02 O
ATOM 4 OP2 A B 8 26.975 40.657 25.415 1.00 26.33 O
ATOM 5 O5' A B 8 25.067 42.260 25.045 1.00 27.34 O
ATOM 6 C5' A B 8 24.533 43.551 24.769 1.00 27.88 C
ATOM 7 C4' A B 8 23.098 43.449 24.342 1.00 27.79 C
ATOM 8 O4' A B 8 23.007 42.828 23.034 1.00 26.35 O
ATOM 9 C3' A B 8 22.223 42.578 25.219 1.00 29.31 C
ATOM 10 O3' A B 8 21.821 43.268 26.393 1.00 33.47 O
ATOM 11 C2' A B 8 21.067 42.274 24.279 1.00 28.06 C
ATOM 12 O2' A B 8 20.192 43.370 24.140 1.00 28.03 O
ATOM 13 C1' A B 8 21.814 42.058 22.962 1.00 28.55 C
ATOM 14 N9 A B 8 22.191 40.659 22.786 1.00 28.03 N
ATOM 15 C8 A B 8 23.405 40.081 23.058 1.00 27.34 C
ATOM 16 N7 A B 8 23.451 38.804 22.795 1.00 26.79 N
ATOM 17 C5 A B 8 22.180 38.516 22.323 1.00 26.96 C
ATOM 18 C6 A B 8 21.590 37.326 21.874 1.00 25.51 C
ATOM 19 N6 A B 8 22.228 36.162 21.836 1.00 23.34 N
ATOM 20 N1 A B 8 20.305 37.379 21.461 1.00 25.60 N
ATOM 21 C2 A B 8 19.670 38.554 21.504 1.00 25.43 C
ATOM 22 N3 A B 8 20.118 39.740 21.909 1.00 24.43 N
ATOM 23 C4 A B 8 21.395 39.650 22.311 1.00 26.61 C
ATOM 24 P A B 9 21.580 42.440 27.752 1.00 36.10 P
ATOM 25 OP1 A B 9 21.441 43.423 28.859 1.00 36.91 O
ATOM 26 OP2 A B 9 22.587 41.352 27.860 1.00 35.94 O
ATOM 27 O5' A B 9 20.156 41.781 27.508 1.00 34.68 O
TER
ATOM 2 P A A 9 21.580 42.440 27.752 1.00 36.10 P
ATOM 3 OP1 A A 9 21.441 43.423 28.859 1.00 36.91 O
ATOM 4 OP2 A A 9 22.587 41.352 27.860 1.00 35.94 O
ATOM 5 O5' A A 9 20.156 41.781 27.508 1.00 34.68 O
ATOM 6 C5' A A 9 19.038 42.603 27.257 1.00 32.82 C
ATOM 7 C4' A A 9 17.877 41.775 26.795 1.00 34.04 C
ATOM 8 O4' A A 9 18.148 41.226 25.475 1.00 32.88 O
ATOM 9 C3' A A 9 17.550 40.546 27.625 1.00 34.84 C
ATOM 10 O3' A A 9 16.840 40.872 28.817 1.00 36.17 O
ATOM 11 C2' A A 9 16.696 39.769 26.635 1.00 33.75 C
ATOM 12 O2' A A 9 15.425 40.357 26.475 1.00 34.26 O
ATOM 13 C1' A A 9 17.498 39.969 25.348 1.00 32.43 C
ATOM 14 N9 A A 9 18.523 38.934 25.223 1.00 30.74 N
ATOM 15 C8 A A 9 19.853 39.010 25.556 1.00 28.20 C
ATOM 16 N7 A A 9 20.513 37.902 25.338 1.00 27.35 N
ATOM 17 C5 A A 9 19.555 37.037 24.827 1.00 27.43 C
ATOM 18 C6 A A 9 19.618 35.701 24.390 1.00 25.40 C
ATOM 19 N6 A A 9 20.734 34.968 24.405 1.00 23.22 N
ATOM 20 N1 A A 9 18.480 35.137 23.935 1.00 26.15 N
ATOM 21 C2 A A 9 17.359 35.866 23.930 1.00 27.73 C
ATOM 22 N3 A A 9 17.173 37.125 24.314 1.00 28.28 N
ATOM 23 C4 A A 9 18.325 37.661 24.752 1.00 27.86 C
ATOM 24 P G A 10 17.162 40.069 30.176 1.00 38.57 P
ATOM 25 OP1 G A 10 16.434 40.789 31.255 1.00 38.96 O
ATOM 26 OP2 G A 10 18.628 39.872 30.290 1.00 38.05 O
ATOM 27 O5' G A 10 16.482 38.645 29.935 1.00 35.90 O
TER
ATOM 1 O3' U B 7 27.224 42.625 23.863 1.00 24.59 O
ATOM 2 P A B 8 26.634 42.095 25.258 1.00 25.35 P
ATOM 3 OP1 A B 8 27.074 43.068 26.291 1.00 28.02 O
ATOM 4 OP2 A B 8 26.975 40.657 25.415 1.00 26.33 O
ATOM 5 O5' A B 8 25.067 42.260 25.045 1.00 27.34 O
ATOM 6 C5' A B 8 24.533 43.551 24.769 1.00 27.88 C
ATOM 7 C4' A B 8 23.098 43.449 24.342 1.00 27.79 C
ATOM 8 O4' A B 8 23.007 42.828 23.034 1.00 26.35 O
ATOM 9 C3' A B 8 22.223 42.578 25.219 1.00 29.31 C
ATOM 10 O3' A B 8 21.821 43.268 26.393 1.00 33.47 O
ATOM 11 C2' A B 8 21.067 42.274 24.279 1.00 28.06 C
ATOM 12 O2' A B 8 20.192 43.370 24.140 1.00 28.03 O
ATOM 13 C1' A B 8 21.814 42.058 22.962 1.00 28.55 C
ATOM 14 N9 A B 8 22.191 40.659 22.786 1.00 28.03 N
ATOM 15 C8 A B 8 23.405 40.081 23.058 1.00 27.34 C
ATOM 16 N7 A B 8 23.451 38.804 22.795 1.00 26.79 N
ATOM 17 C5 A B 8 22.180 38.516 22.323 1.00 26.96 C
ATOM 18 C6 A B 8 21.590 37.326 21.874 1.00 25.51 C
ATOM 19 N6 A B 8 22.228 36.162 21.836 1.00 23.34 N
ATOM 20 N1 A B 8 20.305 37.379 21.461 1.00 25.60 N
ATOM 21 C2 A B 8 19.670 38.554 21.504 1.00 25.43 C
ATOM 22 N3 A B 8 20.118 39.740 21.909 1.00 24.43 N
ATOM 23 C4 A B 8 21.395 39.650 22.311 1.00 26.61 C
ATOM 24 P A B 9 21.580 42.440 27.752 1.00 36.10 P
ATOM 25 OP1 A B 9 21.441 43.423 28.859 1.00 36.91 O
ATOM 26 OP2 A B 9 22.587 41.352 27.860 1.00 35.94 O
ATOM 27 O5' A B 9 20.156 41.781 27.508 1.00 34.68 O
TER
Atoms:
OP1: (21.441,43.423,28.859)
OP2: (22.587,41.352,27.860)
C3': (17.550,40.546,27.625)
C1': (17.498,39.969,25.348)
C5': (19.038,42.603,27.257)
O4': (18.148,41.226,25.475)
C8: (19.853,39.010,25.556)
O2': (15.425,40.357,26.475)
C6: (19.618,35.701,24.390)
C5: (19.555,37.037,24.827)
C4: (18.325,37.661,24.752)
P: (21.580,42.440,27.752)
C4': (17.877,41.775,26.795)
C2': (16.696,39.769,26.635)
C2: (17.359,35.866,23.930)
N1: (18.480,35.137,23.935)
N3: (17.173,37.125,24.314)
N6: (20.734,34.968,24.405)
N7: (20.513,37.902,25.338)
N9: (18.523,38.934,25.223)
O5': (20.156,41.781,27.508)
O3': (16.840,40.872,28.817)
OP2: (22.587,41.352,27.860)
C3': (17.550,40.546,27.625)
C1': (17.498,39.969,25.348)
C5': (19.038,42.603,27.257)
O4': (18.148,41.226,25.475)
C8: (19.853,39.010,25.556)
O2': (15.425,40.357,26.475)
C6: (19.618,35.701,24.390)
C5: (19.555,37.037,24.827)
C4: (18.325,37.661,24.752)
P: (21.580,42.440,27.752)
C4': (17.877,41.775,26.795)
C2': (16.696,39.769,26.635)
C2: (17.359,35.866,23.930)
N1: (18.480,35.137,23.935)
N3: (17.173,37.125,24.314)
N6: (20.734,34.968,24.405)
N7: (20.513,37.902,25.338)
N9: (18.523,38.934,25.223)
O5': (20.156,41.781,27.508)
O3': (16.840,40.872,28.817)
OP1: (27.074,43.068,26.291)
OP2: (26.975,40.657,25.415)
C3': (22.223,42.578,25.219)
C1': (21.814,42.058,22.962)
C5': (24.533,43.551,24.769)
O4': (23.007,42.828,23.034)
C8: (23.405,40.081,23.058)
O2': (20.192,43.370,24.140)
C6: (21.590,37.326,21.874)
C5: (22.180,38.516,22.323)
C4: (21.395,39.650,22.311)
P: (26.634,42.095,25.258)
C4': (23.098,43.449,24.342)
C2': (21.067,42.274,24.279)
C2: (19.670,38.554,21.504)
N1: (20.305,37.379,21.461)
N3: (20.118,39.740,21.909)
N6: (22.228,36.162,21.836)
N7: (23.451,38.804,22.795)
N9: (22.191,40.659,22.786)
O5': (25.067,42.260,25.045)
O3': (21.821,43.268,26.393)
OP2: (26.975,40.657,25.415)
C3': (22.223,42.578,25.219)
C1': (21.814,42.058,22.962)
C5': (24.533,43.551,24.769)
O4': (23.007,42.828,23.034)
C8: (23.405,40.081,23.058)
O2': (20.192,43.370,24.140)
C6: (21.590,37.326,21.874)
C5: (22.180,38.516,22.323)
C4: (21.395,39.650,22.311)
P: (26.634,42.095,25.258)
C4': (23.098,43.449,24.342)
C2': (21.067,42.274,24.279)
C2: (19.670,38.554,21.504)
N1: (20.305,37.379,21.461)
N3: (20.118,39.740,21.909)
N6: (22.228,36.162,21.836)
N7: (23.451,38.804,22.795)
N9: (22.191,40.659,22.786)
O5': (25.067,42.260,25.045)
O3': (21.821,43.268,26.393)
Image (generated by PyMOL):