Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21107:21106
Extra
PDB:
ATOM 1 O3' A A1106 -28.874 8.518 92.379 1.00 62.58 O
ATOM 2 P A A1107 -30.039 8.786 91.328 1.00 56.25 P
ATOM 3 OP1 A A1107 -29.485 8.504 89.981 1.00 56.10 O
ATOM 4 OP2 A A1107 -30.606 10.145 91.609 1.00 56.20 O
ATOM 5 O5' A A1107 -31.091 7.692 91.687 1.00 56.39 O
ATOM 6 C5' A A1107 -30.783 6.339 91.565 1.00 56.48 C
ATOM 7 C4' A A1107 -31.775 5.553 92.321 1.00 56.67 C
ATOM 8 O4' A A1107 -31.670 5.904 93.718 1.00 56.87 O
ATOM 9 C3' A A1107 -33.197 5.868 91.989 1.00 56.61 C
ATOM 10 O3' A A1107 -33.630 5.224 90.800 1.00 56.50 O
ATOM 11 C2' A A1107 -33.912 5.411 93.250 1.00 56.88 C
ATOM 12 O2' A A1107 -33.981 3.995 93.288 1.00 57.02 O
ATOM 13 C1' A A1107 -32.924 5.852 94.324 1.00 57.00 C
ATOM 14 N9 A A1107 -33.244 7.183 94.862 1.00 56.98 N
ATOM 15 C8 A A1107 -32.982 8.404 94.322 1.00 56.77 C
ATOM 16 N7 A A1107 -33.422 9.426 95.021 1.00 56.82 N
ATOM 17 C5 A A1107 -34.040 8.845 96.105 1.00 57.08 C
ATOM 18 C6 A A1107 -34.736 9.385 97.199 1.00 57.27 C
ATOM 19 N6 A A1107 -34.909 10.690 97.409 1.00 57.22 N
ATOM 20 N1 A A1107 -35.243 8.539 98.108 1.00 57.54 N
ATOM 21 C2 A A1107 -35.065 7.231 97.927 1.00 57.62 C
ATOM 22 N3 A A1107 -34.451 6.589 96.933 1.00 57.46 N
ATOM 23 C4 A A1107 -33.940 7.465 96.027 1.00 57.18 C
ATOM 24 P G A1108 -34.567 6.009 89.745 1.00 53.62 P
ATOM 25 OP1 G A1108 -34.724 5.130 88.566 1.00 53.53 O
ATOM 26 OP2 G A1108 -33.972 7.369 89.562 1.00 53.48 O
ATOM 27 O5' G A1108 -35.968 6.111 90.519 1.00 53.78 O
TER
ATOM 1 O3' C B1105 -26.814 13.031 95.998 1.00 63.99 O
ATOM 2 P A B1106 -28.078 13.136 95.013 1.00 62.66 P
ATOM 3 OP1 A B1106 -27.637 13.864 93.799 1.00 62.45 O
ATOM 4 OP2 A B1106 -29.190 13.687 95.826 1.00 62.75 O
ATOM 5 O5' A B1106 -28.368 11.623 94.639 1.00 62.70 O
ATOM 6 C5' A B1106 -27.347 10.801 94.107 1.00 62.70 C
ATOM 7 C4' A B1106 -27.676 9.353 94.304 1.00 62.83 C
ATOM 8 O4' A B1106 -27.769 9.070 95.717 1.00 63.10 O
ATOM 9 C3' A B1106 -29.006 8.911 93.723 1.00 62.75 C
ATOM 10 O3' A B1106 -28.874 8.518 92.379 1.00 62.58 O
ATOM 11 C2' A B1106 -29.420 7.773 94.634 1.00 63.00 C
ATOM 12 O2' A B1106 -28.761 6.573 94.253 1.00 63.05 O
ATOM 13 C1' A B1106 -28.844 8.211 95.969 1.00 63.20 C
ATOM 14 N9 A B1106 -29.812 8.912 96.832 1.00 63.28 N
ATOM 15 C8 A B1106 -30.044 10.253 97.023 1.00 63.20 C
ATOM 16 N7 A B1106 -30.933 10.531 97.957 1.00 63.35 N
ATOM 17 C5 A B1106 -31.270 9.283 98.426 1.00 63.56 C
ATOM 18 C6 A B1106 -32.141 8.877 99.421 1.00 63.82 C
ATOM 19 N6 A B1106 -32.852 9.738 100.131 1.00 63.90 N
ATOM 20 N1 A B1106 -32.266 7.555 99.652 1.00 64.01 N
ATOM 21 C2 A B1106 -31.527 6.707 98.927 1.00 63.93 C
ATOM 22 N3 A B1106 -30.656 6.961 97.957 1.00 63.70 N
ATOM 23 C4 A B1106 -30.589 8.284 97.758 1.00 63.52 C
ATOM 24 P A B1107 -30.039 8.786 91.328 1.00 56.25 P
ATOM 25 OP1 A B1107 -29.485 8.504 89.981 1.00 56.10 O
ATOM 26 OP2 A B1107 -30.606 10.145 91.609 1.00 56.20 O
ATOM 27 O5' A B1107 -31.091 7.692 91.687 1.00 56.39 O
TER
ATOM 2 P A A1107 -30.039 8.786 91.328 1.00 56.25 P
ATOM 3 OP1 A A1107 -29.485 8.504 89.981 1.00 56.10 O
ATOM 4 OP2 A A1107 -30.606 10.145 91.609 1.00 56.20 O
ATOM 5 O5' A A1107 -31.091 7.692 91.687 1.00 56.39 O
ATOM 6 C5' A A1107 -30.783 6.339 91.565 1.00 56.48 C
ATOM 7 C4' A A1107 -31.775 5.553 92.321 1.00 56.67 C
ATOM 8 O4' A A1107 -31.670 5.904 93.718 1.00 56.87 O
ATOM 9 C3' A A1107 -33.197 5.868 91.989 1.00 56.61 C
ATOM 10 O3' A A1107 -33.630 5.224 90.800 1.00 56.50 O
ATOM 11 C2' A A1107 -33.912 5.411 93.250 1.00 56.88 C
ATOM 12 O2' A A1107 -33.981 3.995 93.288 1.00 57.02 O
ATOM 13 C1' A A1107 -32.924 5.852 94.324 1.00 57.00 C
ATOM 14 N9 A A1107 -33.244 7.183 94.862 1.00 56.98 N
ATOM 15 C8 A A1107 -32.982 8.404 94.322 1.00 56.77 C
ATOM 16 N7 A A1107 -33.422 9.426 95.021 1.00 56.82 N
ATOM 17 C5 A A1107 -34.040 8.845 96.105 1.00 57.08 C
ATOM 18 C6 A A1107 -34.736 9.385 97.199 1.00 57.27 C
ATOM 19 N6 A A1107 -34.909 10.690 97.409 1.00 57.22 N
ATOM 20 N1 A A1107 -35.243 8.539 98.108 1.00 57.54 N
ATOM 21 C2 A A1107 -35.065 7.231 97.927 1.00 57.62 C
ATOM 22 N3 A A1107 -34.451 6.589 96.933 1.00 57.46 N
ATOM 23 C4 A A1107 -33.940 7.465 96.027 1.00 57.18 C
ATOM 24 P G A1108 -34.567 6.009 89.745 1.00 53.62 P
ATOM 25 OP1 G A1108 -34.724 5.130 88.566 1.00 53.53 O
ATOM 26 OP2 G A1108 -33.972 7.369 89.562 1.00 53.48 O
ATOM 27 O5' G A1108 -35.968 6.111 90.519 1.00 53.78 O
TER
ATOM 1 O3' C B1105 -26.814 13.031 95.998 1.00 63.99 O
ATOM 2 P A B1106 -28.078 13.136 95.013 1.00 62.66 P
ATOM 3 OP1 A B1106 -27.637 13.864 93.799 1.00 62.45 O
ATOM 4 OP2 A B1106 -29.190 13.687 95.826 1.00 62.75 O
ATOM 5 O5' A B1106 -28.368 11.623 94.639 1.00 62.70 O
ATOM 6 C5' A B1106 -27.347 10.801 94.107 1.00 62.70 C
ATOM 7 C4' A B1106 -27.676 9.353 94.304 1.00 62.83 C
ATOM 8 O4' A B1106 -27.769 9.070 95.717 1.00 63.10 O
ATOM 9 C3' A B1106 -29.006 8.911 93.723 1.00 62.75 C
ATOM 10 O3' A B1106 -28.874 8.518 92.379 1.00 62.58 O
ATOM 11 C2' A B1106 -29.420 7.773 94.634 1.00 63.00 C
ATOM 12 O2' A B1106 -28.761 6.573 94.253 1.00 63.05 O
ATOM 13 C1' A B1106 -28.844 8.211 95.969 1.00 63.20 C
ATOM 14 N9 A B1106 -29.812 8.912 96.832 1.00 63.28 N
ATOM 15 C8 A B1106 -30.044 10.253 97.023 1.00 63.20 C
ATOM 16 N7 A B1106 -30.933 10.531 97.957 1.00 63.35 N
ATOM 17 C5 A B1106 -31.270 9.283 98.426 1.00 63.56 C
ATOM 18 C6 A B1106 -32.141 8.877 99.421 1.00 63.82 C
ATOM 19 N6 A B1106 -32.852 9.738 100.131 1.00 63.90 N
ATOM 20 N1 A B1106 -32.266 7.555 99.652 1.00 64.01 N
ATOM 21 C2 A B1106 -31.527 6.707 98.927 1.00 63.93 C
ATOM 22 N3 A B1106 -30.656 6.961 97.957 1.00 63.70 N
ATOM 23 C4 A B1106 -30.589 8.284 97.758 1.00 63.52 C
ATOM 24 P A B1107 -30.039 8.786 91.328 1.00 56.25 P
ATOM 25 OP1 A B1107 -29.485 8.504 89.981 1.00 56.10 O
ATOM 26 OP2 A B1107 -30.606 10.145 91.609 1.00 56.20 O
ATOM 27 O5' A B1107 -31.091 7.692 91.687 1.00 56.39 O
TER
Atoms:
OP1: (-29.485,8.504,89.981)
OP2: (-30.606,10.145,91.609)
C3': (-33.197,5.868,91.989)
C1': (-32.924,5.852,94.324)
C5': (-30.783,6.339,91.565)
O4': (-31.670,5.904,93.718)
C8: (-32.982,8.404,94.322)
O2': (-33.981,3.995,93.288)
C6: (-34.736,9.385,97.199)
C5: (-34.040,8.845,96.105)
C4: (-33.940,7.465,96.027)
P: (-30.039,8.786,91.328)
C4': (-31.775,5.553,92.321)
C2': (-33.912,5.411,93.250)
C2: (-35.065,7.231,97.927)
N1: (-35.243,8.539,98.108)
N3: (-34.451,6.589,96.933)
N6: (-34.909,10.690,97.409)
N7: (-33.422,9.426,95.021)
N9: (-33.244,7.183,94.862)
O5': (-31.091,7.692,91.687)
O3': (-33.630,5.224,90.800)
OP2: (-30.606,10.145,91.609)
C3': (-33.197,5.868,91.989)
C1': (-32.924,5.852,94.324)
C5': (-30.783,6.339,91.565)
O4': (-31.670,5.904,93.718)
C8: (-32.982,8.404,94.322)
O2': (-33.981,3.995,93.288)
C6: (-34.736,9.385,97.199)
C5: (-34.040,8.845,96.105)
C4: (-33.940,7.465,96.027)
P: (-30.039,8.786,91.328)
C4': (-31.775,5.553,92.321)
C2': (-33.912,5.411,93.250)
C2: (-35.065,7.231,97.927)
N1: (-35.243,8.539,98.108)
N3: (-34.451,6.589,96.933)
N6: (-34.909,10.690,97.409)
N7: (-33.422,9.426,95.021)
N9: (-33.244,7.183,94.862)
O5': (-31.091,7.692,91.687)
O3': (-33.630,5.224,90.800)
OP1: (-27.637,13.864,93.799)
OP2: (-29.190,13.687,95.826)
C3': (-29.006,8.911,93.723)
C1': (-28.844,8.211,95.969)
C5': (-27.347,10.801,94.107)
O4': (-27.769,9.070,95.717)
C8: (-30.044,10.253,97.023)
O2': (-28.761,6.573,94.253)
C6: (-32.141,8.877,99.421)
C5: (-31.270,9.283,98.426)
C4: (-30.589,8.284,97.758)
P: (-28.078,13.136,95.013)
C4': (-27.676,9.353,94.304)
C2': (-29.420,7.773,94.634)
C2: (-31.527,6.707,98.927)
N1: (-32.266,7.555,99.652)
N3: (-30.656,6.961,97.957)
N6: (-32.852,9.738,100.131)
N7: (-30.933,10.531,97.957)
N9: (-29.812,8.912,96.832)
O5': (-28.368,11.623,94.639)
O3': (-28.874,8.518,92.379)
OP2: (-29.190,13.687,95.826)
C3': (-29.006,8.911,93.723)
C1': (-28.844,8.211,95.969)
C5': (-27.347,10.801,94.107)
O4': (-27.769,9.070,95.717)
C8: (-30.044,10.253,97.023)
O2': (-28.761,6.573,94.253)
C6: (-32.141,8.877,99.421)
C5: (-31.270,9.283,98.426)
C4: (-30.589,8.284,97.758)
P: (-28.078,13.136,95.013)
C4': (-27.676,9.353,94.304)
C2': (-29.420,7.773,94.634)
C2: (-31.527,6.707,98.927)
N1: (-32.266,7.555,99.652)
N3: (-30.656,6.961,97.957)
N6: (-32.852,9.738,100.131)
N7: (-30.933,10.531,97.957)
N9: (-29.812,8.912,96.832)
O5': (-28.368,11.623,94.639)
O3': (-28.874,8.518,92.379)
Image (generated by PyMOL):