Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2088:A2087
Extra
PDB:
ATOM 1 O3' A A2087 -70.298 -0.017 74.362 1.00 12.62 O
ATOM 2 P A A2088 -71.631 0.849 74.151 1.00 25.90 P
ATOM 3 OP1 A A2088 -72.314 0.920 75.473 1.00 25.90 O
ATOM 4 OP2 A A2088 -72.362 0.258 72.995 1.00 25.90 O
ATOM 5 O5' A A2088 -71.050 2.286 73.745 1.00 25.90 O
ATOM 6 C5' A A2088 -71.911 3.364 73.399 1.00 25.90 C
ATOM 7 C4' A A2088 -71.143 4.514 72.796 1.00 25.90 C
ATOM 8 O4' A A2088 -70.149 4.002 71.877 1.00 25.90 O
ATOM 9 C3' A A2088 -71.965 5.497 71.966 1.00 25.90 C
ATOM 10 O3' A A2088 -72.542 6.518 72.744 1.00 25.90 O
ATOM 11 C2' A A2088 -70.976 6.009 70.943 1.00 25.90 C
ATOM 12 O2' A A2088 -70.152 7.017 71.504 1.00 25.90 O
ATOM 13 C1' A A2088 -70.146 4.761 70.692 1.00 25.90 C
ATOM 14 N9 A A2088 -70.738 3.931 69.639 1.00 25.74 N
ATOM 15 C8 A A2088 -71.300 2.697 69.824 1.00 25.74 C
ATOM 16 N7 A A2088 -71.753 2.169 68.721 1.00 25.74 N
ATOM 17 C5 A A2088 -71.482 3.127 67.759 1.00 25.74 C
ATOM 18 C6 A A2088 -71.725 3.157 66.383 1.00 25.74 C
ATOM 19 N6 A A2088 -72.328 2.156 65.741 1.00 25.74 N
ATOM 20 N1 A A2088 -71.333 4.251 65.697 1.00 25.74 N
ATOM 21 C2 A A2088 -70.736 5.245 66.369 1.00 25.74 C
ATOM 22 N3 A A2088 -70.445 5.334 67.668 1.00 25.74 N
ATOM 23 C4 A A2088 -70.854 4.224 68.307 1.00 25.74 C
ATOM 24 P C A2089 -74.038 6.339 73.272 1.00 45.61 P
ATOM 25 OP1 C A2089 -74.446 7.639 73.867 1.00 45.61 O
ATOM 26 OP2 C A2089 -74.055 5.120 74.127 1.00 45.61 O
ATOM 27 O5' C A2089 -74.843 6.067 71.916 1.00 45.61 O
TER
ATOM 1 O3' G B2086 -69.644 -5.397 72.115 1.00 1.02 O
ATOM 2 P A B2087 -70.705 -4.193 72.150 1.00 12.62 P
ATOM 3 OP1 A B2087 -71.523 -4.359 73.394 1.00 12.62 O
ATOM 4 OP2 A B2087 -71.400 -4.181 70.817 1.00 12.62 O
ATOM 5 O5' A B2087 -69.761 -2.911 72.291 1.00 12.62 O
ATOM 6 C5' A B2087 -68.864 -2.773 73.388 1.00 12.62 C
ATOM 7 C4' A B2087 -68.405 -1.348 73.529 1.00 12.62 C
ATOM 8 O4' A B2087 -67.366 -1.064 72.548 1.00 12.62 O
ATOM 9 C3' A B2087 -69.462 -0.285 73.252 1.00 12.62 C
ATOM 10 O3' A B2087 -70.298 -0.017 74.362 1.00 12.62 O
ATOM 11 C2' A B2087 -68.626 0.900 72.845 1.00 12.62 C
ATOM 12 O2' A B2087 -68.007 1.472 73.991 1.00 12.62 O
ATOM 13 C1' A B2087 -67.563 0.219 71.998 1.00 12.62 C
ATOM 14 N9 A B2087 -68.009 0.042 70.611 1.00 12.49 N
ATOM 15 C8 A B2087 -68.491 -1.144 70.128 1.00 12.49 C
ATOM 16 N7 A B2087 -68.839 -1.114 68.864 1.00 12.49 N
ATOM 17 C5 A B2087 -68.563 0.185 68.495 1.00 12.49 C
ATOM 18 C6 A B2087 -68.721 0.817 67.267 1.00 12.49 C
ATOM 19 N6 A B2087 -69.210 0.177 66.200 1.00 12.49 N
ATOM 20 N1 A B2087 -68.360 2.096 67.165 1.00 12.49 N
ATOM 21 C2 A B2087 -67.883 2.663 68.261 1.00 12.49 C
ATOM 22 N3 A B2087 -67.694 2.169 69.479 1.00 12.49 N
ATOM 23 C4 A B2087 -68.054 0.903 69.543 1.00 12.49 C
ATOM 24 P A B2088 -71.631 0.849 74.151 1.00 25.90 P
ATOM 25 OP1 A B2088 -72.314 0.920 75.473 1.00 25.90 O
ATOM 26 OP2 A B2088 -72.362 0.258 72.995 1.00 25.90 O
ATOM 27 O5' A B2088 -71.050 2.286 73.745 1.00 25.90 O
TER
ATOM 2 P A A2088 -71.631 0.849 74.151 1.00 25.90 P
ATOM 3 OP1 A A2088 -72.314 0.920 75.473 1.00 25.90 O
ATOM 4 OP2 A A2088 -72.362 0.258 72.995 1.00 25.90 O
ATOM 5 O5' A A2088 -71.050 2.286 73.745 1.00 25.90 O
ATOM 6 C5' A A2088 -71.911 3.364 73.399 1.00 25.90 C
ATOM 7 C4' A A2088 -71.143 4.514 72.796 1.00 25.90 C
ATOM 8 O4' A A2088 -70.149 4.002 71.877 1.00 25.90 O
ATOM 9 C3' A A2088 -71.965 5.497 71.966 1.00 25.90 C
ATOM 10 O3' A A2088 -72.542 6.518 72.744 1.00 25.90 O
ATOM 11 C2' A A2088 -70.976 6.009 70.943 1.00 25.90 C
ATOM 12 O2' A A2088 -70.152 7.017 71.504 1.00 25.90 O
ATOM 13 C1' A A2088 -70.146 4.761 70.692 1.00 25.90 C
ATOM 14 N9 A A2088 -70.738 3.931 69.639 1.00 25.74 N
ATOM 15 C8 A A2088 -71.300 2.697 69.824 1.00 25.74 C
ATOM 16 N7 A A2088 -71.753 2.169 68.721 1.00 25.74 N
ATOM 17 C5 A A2088 -71.482 3.127 67.759 1.00 25.74 C
ATOM 18 C6 A A2088 -71.725 3.157 66.383 1.00 25.74 C
ATOM 19 N6 A A2088 -72.328 2.156 65.741 1.00 25.74 N
ATOM 20 N1 A A2088 -71.333 4.251 65.697 1.00 25.74 N
ATOM 21 C2 A A2088 -70.736 5.245 66.369 1.00 25.74 C
ATOM 22 N3 A A2088 -70.445 5.334 67.668 1.00 25.74 N
ATOM 23 C4 A A2088 -70.854 4.224 68.307 1.00 25.74 C
ATOM 24 P C A2089 -74.038 6.339 73.272 1.00 45.61 P
ATOM 25 OP1 C A2089 -74.446 7.639 73.867 1.00 45.61 O
ATOM 26 OP2 C A2089 -74.055 5.120 74.127 1.00 45.61 O
ATOM 27 O5' C A2089 -74.843 6.067 71.916 1.00 45.61 O
TER
ATOM 1 O3' G B2086 -69.644 -5.397 72.115 1.00 1.02 O
ATOM 2 P A B2087 -70.705 -4.193 72.150 1.00 12.62 P
ATOM 3 OP1 A B2087 -71.523 -4.359 73.394 1.00 12.62 O
ATOM 4 OP2 A B2087 -71.400 -4.181 70.817 1.00 12.62 O
ATOM 5 O5' A B2087 -69.761 -2.911 72.291 1.00 12.62 O
ATOM 6 C5' A B2087 -68.864 -2.773 73.388 1.00 12.62 C
ATOM 7 C4' A B2087 -68.405 -1.348 73.529 1.00 12.62 C
ATOM 8 O4' A B2087 -67.366 -1.064 72.548 1.00 12.62 O
ATOM 9 C3' A B2087 -69.462 -0.285 73.252 1.00 12.62 C
ATOM 10 O3' A B2087 -70.298 -0.017 74.362 1.00 12.62 O
ATOM 11 C2' A B2087 -68.626 0.900 72.845 1.00 12.62 C
ATOM 12 O2' A B2087 -68.007 1.472 73.991 1.00 12.62 O
ATOM 13 C1' A B2087 -67.563 0.219 71.998 1.00 12.62 C
ATOM 14 N9 A B2087 -68.009 0.042 70.611 1.00 12.49 N
ATOM 15 C8 A B2087 -68.491 -1.144 70.128 1.00 12.49 C
ATOM 16 N7 A B2087 -68.839 -1.114 68.864 1.00 12.49 N
ATOM 17 C5 A B2087 -68.563 0.185 68.495 1.00 12.49 C
ATOM 18 C6 A B2087 -68.721 0.817 67.267 1.00 12.49 C
ATOM 19 N6 A B2087 -69.210 0.177 66.200 1.00 12.49 N
ATOM 20 N1 A B2087 -68.360 2.096 67.165 1.00 12.49 N
ATOM 21 C2 A B2087 -67.883 2.663 68.261 1.00 12.49 C
ATOM 22 N3 A B2087 -67.694 2.169 69.479 1.00 12.49 N
ATOM 23 C4 A B2087 -68.054 0.903 69.543 1.00 12.49 C
ATOM 24 P A B2088 -71.631 0.849 74.151 1.00 25.90 P
ATOM 25 OP1 A B2088 -72.314 0.920 75.473 1.00 25.90 O
ATOM 26 OP2 A B2088 -72.362 0.258 72.995 1.00 25.90 O
ATOM 27 O5' A B2088 -71.050 2.286 73.745 1.00 25.90 O
TER
Atoms:
OP1: (-72.314,0.920,75.473)
OP2: (-72.362,0.258,72.995)
C3': (-71.965,5.497,71.966)
C1': (-70.146,4.761,70.692)
C5': (-71.911,3.364,73.399)
O4': (-70.149,4.002,71.877)
C8: (-71.300,2.697,69.824)
O2': (-70.152,7.017,71.504)
C6: (-71.725,3.157,66.383)
C5: (-71.482,3.127,67.759)
C4: (-70.854,4.224,68.307)
P: (-71.631,0.849,74.151)
C4': (-71.143,4.514,72.796)
C2': (-70.976,6.009,70.943)
C2: (-70.736,5.245,66.369)
N1: (-71.333,4.251,65.697)
N3: (-70.445,5.334,67.668)
N6: (-72.328,2.156,65.741)
N7: (-71.753,2.169,68.721)
N9: (-70.738,3.931,69.639)
O5': (-71.050,2.286,73.745)
O3': (-72.542,6.518,72.744)
OP2: (-72.362,0.258,72.995)
C3': (-71.965,5.497,71.966)
C1': (-70.146,4.761,70.692)
C5': (-71.911,3.364,73.399)
O4': (-70.149,4.002,71.877)
C8: (-71.300,2.697,69.824)
O2': (-70.152,7.017,71.504)
C6: (-71.725,3.157,66.383)
C5: (-71.482,3.127,67.759)
C4: (-70.854,4.224,68.307)
P: (-71.631,0.849,74.151)
C4': (-71.143,4.514,72.796)
C2': (-70.976,6.009,70.943)
C2: (-70.736,5.245,66.369)
N1: (-71.333,4.251,65.697)
N3: (-70.445,5.334,67.668)
N6: (-72.328,2.156,65.741)
N7: (-71.753,2.169,68.721)
N9: (-70.738,3.931,69.639)
O5': (-71.050,2.286,73.745)
O3': (-72.542,6.518,72.744)
OP1: (-71.523,-4.359,73.394)
OP2: (-71.400,-4.181,70.817)
C3': (-69.462,-0.285,73.252)
C1': (-67.563,0.219,71.998)
C5': (-68.864,-2.773,73.388)
O4': (-67.366,-1.064,72.548)
C8: (-68.491,-1.144,70.128)
O2': (-68.007,1.472,73.991)
C6: (-68.721,0.817,67.267)
C5: (-68.563,0.185,68.495)
C4: (-68.054,0.903,69.543)
P: (-70.705,-4.193,72.150)
C4': (-68.405,-1.348,73.529)
C2': (-68.626,0.900,72.845)
C2: (-67.883,2.663,68.261)
N1: (-68.360,2.096,67.165)
N3: (-67.694,2.169,69.479)
N6: (-69.210,0.177,66.200)
N7: (-68.839,-1.114,68.864)
N9: (-68.009,0.042,70.611)
O5': (-69.761,-2.911,72.291)
O3': (-70.298,-0.017,74.362)
OP2: (-71.400,-4.181,70.817)
C3': (-69.462,-0.285,73.252)
C1': (-67.563,0.219,71.998)
C5': (-68.864,-2.773,73.388)
O4': (-67.366,-1.064,72.548)
C8: (-68.491,-1.144,70.128)
O2': (-68.007,1.472,73.991)
C6: (-68.721,0.817,67.267)
C5: (-68.563,0.185,68.495)
C4: (-68.054,0.903,69.543)
P: (-70.705,-4.193,72.150)
C4': (-68.405,-1.348,73.529)
C2': (-68.626,0.900,72.845)
C2: (-67.883,2.663,68.261)
N1: (-68.360,2.096,67.165)
N3: (-67.694,2.169,69.479)
N6: (-69.210,0.177,66.200)
N7: (-68.839,-1.114,68.864)
N9: (-68.009,0.042,70.611)
O5': (-69.761,-2.911,72.291)
O3': (-70.298,-0.017,74.362)
Image (generated by PyMOL):