Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A425:A424
Extra
PDB:
ATOM 1 O3' A A 424 55.819 115.194 19.455 1.00 53.61 O
ATOM 2 P A A 425 55.723 115.465 21.035 1.00 54.91 P
ATOM 3 OP1 A A 425 54.529 116.319 21.288 1.00 54.71 O
ATOM 4 OP2 A A 425 57.052 115.897 21.532 1.00 55.61 O
ATOM 5 O5' A A 425 55.423 114.024 21.628 1.00 54.07 O
ATOM 6 C5' A A 425 54.135 113.426 21.443 1.00 53.28 C
ATOM 7 C4' A A 425 54.098 112.079 22.107 1.00 53.96 C
ATOM 8 O4' A A 425 54.974 111.165 21.411 1.00 53.96 O
ATOM 9 C3' A A 425 54.590 112.060 23.541 1.00 53.48 C
ATOM 10 O3' A A 425 53.531 112.455 24.396 1.00 55.29 O
ATOM 11 C2' A A 425 54.991 110.602 23.721 1.00 52.45 C
ATOM 12 O2' A A 425 53.900 109.739 23.941 1.00 51.69 O
ATOM 13 C1' A A 425 55.558 110.278 22.339 1.00 52.56 C
ATOM 14 N9 A A 425 56.996 110.455 22.270 1.00 51.58 N
ATOM 15 C8 A A 425 57.720 111.614 22.408 1.00 51.84 C
ATOM 16 N7 A A 425 59.013 111.435 22.334 1.00 51.80 N
ATOM 17 C5 A A 425 59.144 110.068 22.124 1.00 51.08 C
ATOM 18 C6 A A 425 60.260 109.246 21.976 1.00 51.13 C
ATOM 19 N6 A A 425 61.511 109.705 22.003 1.00 51.50 N
ATOM 20 N1 A A 425 60.052 107.923 21.792 1.00 50.54 N
ATOM 21 C2 A A 425 58.796 107.479 21.745 1.00 50.46 C
ATOM 22 N3 A A 425 57.658 108.157 21.867 1.00 50.92 N
ATOM 23 C4 A A 425 57.909 109.460 22.066 1.00 50.75 C
ATOM 24 P C A 426 53.766 113.613 25.485 1.00 55.63 P
ATOM 25 OP1 C A 426 52.464 113.842 26.162 1.00 53.53 O
ATOM 26 OP2 C A 426 54.467 114.761 24.845 1.00 57.45 O
ATOM 27 O5' C A 426 54.730 112.905 26.528 1.00 54.55 O
TER
ATOM 1 O3' A B 423 60.957 117.313 17.085 1.00 54.90 O
ATOM 2 P A B 424 60.208 117.140 18.484 1.00 55.43 P
ATOM 3 OP1 A B 424 59.340 118.317 18.729 1.00 56.01 O
ATOM 4 OP2 A B 424 61.203 116.727 19.511 1.00 54.39 O
ATOM 5 O5' A B 424 59.242 115.922 18.181 1.00 55.29 O
ATOM 6 C5' A B 424 58.080 116.098 17.367 1.00 53.14 C
ATOM 7 C4' A B 424 57.222 114.879 17.484 1.00 52.84 C
ATOM 8 O4' A B 424 57.962 113.752 16.953 1.00 51.44 O
ATOM 9 C3' A B 424 56.945 114.499 18.929 1.00 52.24 C
ATOM 10 O3' A B 424 55.819 115.194 19.455 1.00 53.61 O
ATOM 11 C2' A B 424 56.731 113.000 18.843 1.00 50.86 C
ATOM 12 O2' A B 424 55.433 112.698 18.364 1.00 51.54 O
ATOM 13 C1' A B 424 57.742 112.619 17.765 1.00 48.93 C
ATOM 14 N9 A B 424 59.037 112.175 18.252 1.00 45.44 N
ATOM 15 C8 A B 424 60.108 112.951 18.590 1.00 45.25 C
ATOM 16 N7 A B 424 61.191 112.263 18.870 1.00 45.42 N
ATOM 17 C5 A B 424 60.790 110.942 18.730 1.00 43.27 C
ATOM 18 C6 A B 424 61.480 109.724 18.858 1.00 42.56 C
ATOM 19 N6 A B 424 62.783 109.641 19.123 1.00 41.04 N
ATOM 20 N1 A B 424 60.778 108.586 18.684 1.00 42.20 N
ATOM 21 C2 A B 424 59.484 108.679 18.377 1.00 42.98 C
ATOM 22 N3 A B 424 58.731 109.764 18.200 1.00 42.85 N
ATOM 23 C4 A B 424 59.452 110.876 18.392 1.00 43.50 C
ATOM 24 P A B 425 55.723 115.465 21.035 1.00 54.91 P
ATOM 25 OP1 A B 425 54.529 116.319 21.288 1.00 54.71 O
ATOM 26 OP2 A B 425 57.052 115.897 21.532 1.00 55.61 O
ATOM 27 O5' A B 425 55.423 114.024 21.628 1.00 54.07 O
TER
ATOM 2 P A A 425 55.723 115.465 21.035 1.00 54.91 P
ATOM 3 OP1 A A 425 54.529 116.319 21.288 1.00 54.71 O
ATOM 4 OP2 A A 425 57.052 115.897 21.532 1.00 55.61 O
ATOM 5 O5' A A 425 55.423 114.024 21.628 1.00 54.07 O
ATOM 6 C5' A A 425 54.135 113.426 21.443 1.00 53.28 C
ATOM 7 C4' A A 425 54.098 112.079 22.107 1.00 53.96 C
ATOM 8 O4' A A 425 54.974 111.165 21.411 1.00 53.96 O
ATOM 9 C3' A A 425 54.590 112.060 23.541 1.00 53.48 C
ATOM 10 O3' A A 425 53.531 112.455 24.396 1.00 55.29 O
ATOM 11 C2' A A 425 54.991 110.602 23.721 1.00 52.45 C
ATOM 12 O2' A A 425 53.900 109.739 23.941 1.00 51.69 O
ATOM 13 C1' A A 425 55.558 110.278 22.339 1.00 52.56 C
ATOM 14 N9 A A 425 56.996 110.455 22.270 1.00 51.58 N
ATOM 15 C8 A A 425 57.720 111.614 22.408 1.00 51.84 C
ATOM 16 N7 A A 425 59.013 111.435 22.334 1.00 51.80 N
ATOM 17 C5 A A 425 59.144 110.068 22.124 1.00 51.08 C
ATOM 18 C6 A A 425 60.260 109.246 21.976 1.00 51.13 C
ATOM 19 N6 A A 425 61.511 109.705 22.003 1.00 51.50 N
ATOM 20 N1 A A 425 60.052 107.923 21.792 1.00 50.54 N
ATOM 21 C2 A A 425 58.796 107.479 21.745 1.00 50.46 C
ATOM 22 N3 A A 425 57.658 108.157 21.867 1.00 50.92 N
ATOM 23 C4 A A 425 57.909 109.460 22.066 1.00 50.75 C
ATOM 24 P C A 426 53.766 113.613 25.485 1.00 55.63 P
ATOM 25 OP1 C A 426 52.464 113.842 26.162 1.00 53.53 O
ATOM 26 OP2 C A 426 54.467 114.761 24.845 1.00 57.45 O
ATOM 27 O5' C A 426 54.730 112.905 26.528 1.00 54.55 O
TER
ATOM 1 O3' A B 423 60.957 117.313 17.085 1.00 54.90 O
ATOM 2 P A B 424 60.208 117.140 18.484 1.00 55.43 P
ATOM 3 OP1 A B 424 59.340 118.317 18.729 1.00 56.01 O
ATOM 4 OP2 A B 424 61.203 116.727 19.511 1.00 54.39 O
ATOM 5 O5' A B 424 59.242 115.922 18.181 1.00 55.29 O
ATOM 6 C5' A B 424 58.080 116.098 17.367 1.00 53.14 C
ATOM 7 C4' A B 424 57.222 114.879 17.484 1.00 52.84 C
ATOM 8 O4' A B 424 57.962 113.752 16.953 1.00 51.44 O
ATOM 9 C3' A B 424 56.945 114.499 18.929 1.00 52.24 C
ATOM 10 O3' A B 424 55.819 115.194 19.455 1.00 53.61 O
ATOM 11 C2' A B 424 56.731 113.000 18.843 1.00 50.86 C
ATOM 12 O2' A B 424 55.433 112.698 18.364 1.00 51.54 O
ATOM 13 C1' A B 424 57.742 112.619 17.765 1.00 48.93 C
ATOM 14 N9 A B 424 59.037 112.175 18.252 1.00 45.44 N
ATOM 15 C8 A B 424 60.108 112.951 18.590 1.00 45.25 C
ATOM 16 N7 A B 424 61.191 112.263 18.870 1.00 45.42 N
ATOM 17 C5 A B 424 60.790 110.942 18.730 1.00 43.27 C
ATOM 18 C6 A B 424 61.480 109.724 18.858 1.00 42.56 C
ATOM 19 N6 A B 424 62.783 109.641 19.123 1.00 41.04 N
ATOM 20 N1 A B 424 60.778 108.586 18.684 1.00 42.20 N
ATOM 21 C2 A B 424 59.484 108.679 18.377 1.00 42.98 C
ATOM 22 N3 A B 424 58.731 109.764 18.200 1.00 42.85 N
ATOM 23 C4 A B 424 59.452 110.876 18.392 1.00 43.50 C
ATOM 24 P A B 425 55.723 115.465 21.035 1.00 54.91 P
ATOM 25 OP1 A B 425 54.529 116.319 21.288 1.00 54.71 O
ATOM 26 OP2 A B 425 57.052 115.897 21.532 1.00 55.61 O
ATOM 27 O5' A B 425 55.423 114.024 21.628 1.00 54.07 O
TER
Atoms:
OP1: (54.529,116.319,21.288)
OP2: (57.052,115.897,21.532)
C3': (54.590,112.060,23.541)
C1': (55.558,110.278,22.339)
C5': (54.135,113.426,21.443)
O4': (54.974,111.165,21.411)
C8: (57.720,111.614,22.408)
O2': (53.900,109.739,23.941)
C6: (60.260,109.246,21.976)
C5: (59.144,110.068,22.124)
C4: (57.909,109.460,22.066)
P: (55.723,115.465,21.035)
C4': (54.098,112.079,22.107)
C2': (54.991,110.602,23.721)
C2: (58.796,107.479,21.745)
N1: (60.052,107.923,21.792)
N3: (57.658,108.157,21.867)
N6: (61.511,109.705,22.003)
N7: (59.013,111.435,22.334)
N9: (56.996,110.455,22.270)
O5': (55.423,114.024,21.628)
O3': (53.531,112.455,24.396)
OP2: (57.052,115.897,21.532)
C3': (54.590,112.060,23.541)
C1': (55.558,110.278,22.339)
C5': (54.135,113.426,21.443)
O4': (54.974,111.165,21.411)
C8: (57.720,111.614,22.408)
O2': (53.900,109.739,23.941)
C6: (60.260,109.246,21.976)
C5: (59.144,110.068,22.124)
C4: (57.909,109.460,22.066)
P: (55.723,115.465,21.035)
C4': (54.098,112.079,22.107)
C2': (54.991,110.602,23.721)
C2: (58.796,107.479,21.745)
N1: (60.052,107.923,21.792)
N3: (57.658,108.157,21.867)
N6: (61.511,109.705,22.003)
N7: (59.013,111.435,22.334)
N9: (56.996,110.455,22.270)
O5': (55.423,114.024,21.628)
O3': (53.531,112.455,24.396)
OP1: (59.340,118.317,18.729)
OP2: (61.203,116.727,19.511)
C3': (56.945,114.499,18.929)
C1': (57.742,112.619,17.765)
C5': (58.080,116.098,17.367)
O4': (57.962,113.752,16.953)
C8: (60.108,112.951,18.590)
O2': (55.433,112.698,18.364)
C6: (61.480,109.724,18.858)
C5: (60.790,110.942,18.730)
C4: (59.452,110.876,18.392)
P: (60.208,117.140,18.484)
C4': (57.222,114.879,17.484)
C2': (56.731,113.000,18.843)
C2: (59.484,108.679,18.377)
N1: (60.778,108.586,18.684)
N3: (58.731,109.764,18.200)
N6: (62.783,109.641,19.123)
N7: (61.191,112.263,18.870)
N9: (59.037,112.175,18.252)
O5': (59.242,115.922,18.181)
O3': (55.819,115.194,19.455)
OP2: (61.203,116.727,19.511)
C3': (56.945,114.499,18.929)
C1': (57.742,112.619,17.765)
C5': (58.080,116.098,17.367)
O4': (57.962,113.752,16.953)
C8: (60.108,112.951,18.590)
O2': (55.433,112.698,18.364)
C6: (61.480,109.724,18.858)
C5: (60.790,110.942,18.730)
C4: (59.452,110.876,18.392)
P: (60.208,117.140,18.484)
C4': (57.222,114.879,17.484)
C2': (56.731,113.000,18.843)
C2: (59.484,108.679,18.377)
N1: (60.778,108.586,18.684)
N3: (58.731,109.764,18.200)
N6: (62.783,109.641,19.123)
N7: (61.191,112.263,18.870)
N9: (59.037,112.175,18.252)
O5': (59.242,115.922,18.181)
O3': (55.819,115.194,19.455)
Image (generated by PyMOL):