ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:V35:V34

Extra

PDB:
ATOM 1 O3' A A 34 -115.494 17.826 -3.912 1.00 11.71 O
ATOM 2 P A A 35 -115.235 16.805 -2.710 1.00 16.38 P
ATOM 3 OP1 A A 35 -116.335 15.792 -2.742 1.00 16.38 O
ATOM 4 OP2 A A 35 -115.044 17.623 -1.481 1.00 16.38 O
ATOM 5 O5' A A 35 -113.858 16.128 -3.127 1.00 16.38 O
ATOM 6 C5' A A 35 -113.758 14.729 -3.295 1.00 16.38 C
ATOM 7 C4' A A 35 -112.346 14.324 -3.601 1.00 16.38 C
ATOM 8 O4' A A 35 -111.587 15.491 -3.992 1.00 16.38 O
ATOM 9 C3' A A 35 -111.548 13.746 -2.440 1.00 16.38 C
ATOM 10 O3' A A 35 -111.833 12.390 -2.196 1.00 16.38 O
ATOM 11 C2' A A 35 -110.109 14.002 -2.856 1.00 16.38 C
ATOM 12 O2' A A 35 -109.648 13.010 -3.775 1.00 16.38 O
ATOM 13 C1' A A 35 -110.244 15.352 -3.579 1.00 16.38 C
ATOM 14 N9 A A 35 -109.923 16.475 -2.696 1.00 16.24 N
ATOM 15 C8 A A 35 -110.797 17.331 -2.083 1.00 16.24 C
ATOM 16 N7 A A 35 -110.186 18.229 -1.337 1.00 16.24 N
ATOM 17 C5 A A 35 -108.819 17.931 -1.469 1.00 16.24 C
ATOM 18 C6 A A 35 -107.625 18.495 -0.942 1.00 16.24 C
ATOM 19 N6 A A 35 -107.571 19.538 -0.122 1.00 16.24 N
ATOM 20 N1 A A 35 -106.448 17.938 -1.309 1.00 16.24 N
ATOM 21 C2 A A 35 -106.451 16.877 -2.128 1.00 16.24 C
ATOM 22 N3 A A 35 -107.488 16.254 -2.680 1.00 16.24 N
ATOM 23 C4 A A 35 -108.652 16.838 -2.316 1.00 16.24 C
ATOM 24 P A A 36 -112.494 11.959 -0.801 1.00 19.48 P
ATOM 25 OP1 A A 36 -113.236 10.707 -1.059 1.00 19.48 O
ATOM 26 OP2 A A 36 -113.237 13.132 -0.278 1.00 19.48 O
ATOM 27 O5' A A 36 -111.218 11.684 0.128 1.00 19.48 O
TER

ATOM 1 O3' G B 33 -116.739 23.536 -3.642 1.00 15.29 O
ATOM 2 P A B 34 -116.771 22.522 -2.401 1.00 11.71 P
ATOM 3 OP1 A B 34 -118.189 22.248 -2.100 1.00 11.71 O
ATOM 4 OP2 A B 34 -115.913 23.091 -1.328 1.00 11.71 O
ATOM 5 O5' A B 34 -116.100 21.238 -3.015 1.00 11.71 O
ATOM 6 C5' A B 34 -116.416 20.843 -4.330 1.00 11.71 C
ATOM 7 C4' A B 34 -115.308 20.035 -4.926 1.00 11.71 C
ATOM 8 O4' A B 34 -114.183 20.896 -5.247 1.00 11.71 O
ATOM 9 C3' A B 34 -114.702 18.985 -4.022 1.00 11.71 C
ATOM 10 O3' A B 34 -115.494 17.826 -3.912 1.00 11.71 O
ATOM 11 C2' A B 34 -113.352 18.745 -4.674 1.00 11.71 C
ATOM 12 O2' A B 34 -113.482 17.908 -5.815 1.00 11.71 O
ATOM 13 C1' A B 34 -112.986 20.165 -5.134 1.00 11.71 C
ATOM 14 N9 A B 34 -112.131 20.852 -4.169 1.00 11.51 N
ATOM 15 C8 A B 34 -112.543 21.727 -3.224 1.00 11.51 C
ATOM 16 N7 A B 34 -111.552 22.171 -2.497 1.00 11.51 N
ATOM 17 C5 A B 34 -110.420 21.548 -3.002 1.00 11.51 C
ATOM 18 C6 A B 34 -109.053 21.614 -2.664 1.00 11.51 C
ATOM 19 N6 A B 34 -108.557 22.379 -1.689 1.00 11.51 N
ATOM 20 N1 A B 34 -108.194 20.859 -3.379 1.00 11.51 N
ATOM 21 C2 A B 34 -108.686 20.105 -4.366 1.00 11.51 C
ATOM 22 N3 A B 34 -109.949 19.958 -4.778 1.00 11.51 N
ATOM 23 C4 A B 34 -110.774 20.723 -4.046 1.00 11.51 C
ATOM 24 P A B 35 -115.235 16.805 -2.710 1.00 16.38 P
ATOM 25 OP1 A B 35 -116.335 15.792 -2.742 1.00 16.38 O
ATOM 26 OP2 A B 35 -115.044 17.623 -1.481 1.00 16.38 O
ATOM 27 O5' A B 35 -113.858 16.128 -3.127 1.00 16.38 O
TER

Atoms:
OP1: (-116.335,15.792,-2.742)
OP2: (-115.044,17.623,-1.481)
C3': (-111.548,13.746,-2.440)
C1': (-110.244,15.352,-3.579)
C5': (-113.758,14.729,-3.295)
O4': (-111.587,15.491,-3.992)
C8: (-110.797,17.331,-2.083)
O2': (-109.648,13.010,-3.775)
C6: (-107.625,18.495,-0.942)
C5: (-108.819,17.931,-1.469)
C4: (-108.652,16.838,-2.316)
P: (-115.235,16.805,-2.710)
C4': (-112.346,14.324,-3.601)
C2': (-110.109,14.002,-2.856)
C2: (-106.451,16.877,-2.128)
N1: (-106.448,17.938,-1.309)
N3: (-107.488,16.254,-2.680)
N6: (-107.571,19.538,-0.122)
N7: (-110.186,18.229,-1.337)
N9: (-109.923,16.475,-2.696)
O5': (-113.858,16.128,-3.127)
O3': (-111.833,12.390,-2.196)
OP1: (-118.189,22.248,-2.100)
OP2: (-115.913,23.091,-1.328)
C3': (-114.702,18.985,-4.022)
C1': (-112.986,20.165,-5.134)
C5': (-116.416,20.843,-4.330)
O4': (-114.183,20.896,-5.247)
C8: (-112.543,21.727,-3.224)
O2': (-113.482,17.908,-5.815)
C6: (-109.053,21.614,-2.664)
C5: (-110.420,21.548,-3.002)
C4: (-110.774,20.723,-4.046)
P: (-116.771,22.522,-2.401)
C4': (-115.308,20.035,-4.926)
C2': (-113.352,18.745,-4.674)
C2: (-108.686,20.105,-4.366)
N1: (-108.194,20.859,-3.379)
N3: (-109.949,19.958,-4.778)
N6: (-108.557,22.379,-1.689)
N7: (-111.552,22.171,-2.497)
N9: (-112.131,20.852,-4.169)
O5': (-116.100,21.238,-3.015)
O3': (-115.494,17.826,-3.912)
Image (generated by PyMOL):
PyMOL image
show in jmol