Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JBT:D20:D19
Extra
PDB:
ATOM 1 O3' A A 19 -6.470 39.209 8.092 1.00 35.78 O
ATOM 2 P A A 20 -5.028 39.616 7.501 1.00 36.88 P
ATOM 3 OP1 A A 20 -4.906 41.069 7.777 1.00 33.35 O
ATOM 4 OP2 A A 20 -4.865 39.115 6.113 1.00 30.33 O
ATOM 5 O5' A A 20 -3.997 38.832 8.436 1.00 37.88 O
ATOM 6 C5' A A 20 -4.132 38.848 9.863 1.00 39.40 C
ATOM 7 C4' A A 20 -3.448 37.645 10.478 1.00 41.88 C
ATOM 8 O4' A A 20 -4.114 36.429 10.041 1.00 44.86 O
ATOM 9 C3' A A 20 -1.987 37.440 10.103 1.00 45.25 C
ATOM 10 O3' A A 20 -1.107 38.232 10.907 1.00 45.31 O
ATOM 11 C2' A A 20 -1.801 35.938 10.316 1.00 47.93 C
ATOM 12 O2' A A 20 -1.553 35.563 11.660 1.00 49.82 O
ATOM 13 C1' A A 20 -3.156 35.395 9.857 1.00 45.37 C
ATOM 14 N9 A A 20 -3.199 34.946 8.462 1.00 44.57 N
ATOM 15 C8 A A 20 -3.810 35.560 7.398 1.00 45.08 C
ATOM 16 N7 A A 20 -3.706 34.897 6.274 1.00 44.26 N
ATOM 17 C5 A A 20 -2.968 33.773 6.614 1.00 44.91 C
ATOM 18 C6 A A 20 -2.519 32.669 5.861 1.00 43.97 C
ATOM 19 N6 A A 20 -2.768 32.506 4.562 1.00 40.03 N
ATOM 20 N1 A A 20 -1.799 31.722 6.502 1.00 44.20 N
ATOM 21 C2 A A 20 -1.560 31.879 7.807 1.00 47.59 C
ATOM 22 N3 A A 20 -1.932 32.868 8.623 1.00 50.09 N
ATOM 23 C4 A A 20 -2.642 33.794 7.956 1.00 45.32 C
ATOM 24 P C A 21 0.306 38.723 10.303 1.00 48.03 P
ATOM 25 OP1 C A 21 0.872 39.679 11.276 1.00 48.09 O
ATOM 26 OP2 C A 21 0.146 39.138 8.886 1.00 48.06 O
ATOM 27 O5' C A 21 1.202 37.409 10.308 1.00 44.73 O
TER
ATOM 1 O3' G B 18 -12.032 39.044 6.057 1.00 37.80 O
ATOM 2 P A B 19 -10.711 39.476 5.234 1.00 42.85 P
ATOM 3 OP1 A B 19 -10.084 40.529 6.075 1.00 39.56 O
ATOM 4 OP2 A B 19 -11.043 39.772 3.821 1.00 37.24 O
ATOM 5 O5' A B 19 -9.815 38.153 5.235 1.00 40.31 O
ATOM 6 C5' A B 19 -8.468 38.156 5.701 1.00 40.69 C
ATOM 7 C4' A B 19 -8.422 38.072 7.217 1.00 39.31 C
ATOM 8 O4' A B 19 -9.157 36.902 7.696 1.00 38.35 O
ATOM 9 C3' A B 19 -7.017 37.936 7.797 1.00 37.32 C
ATOM 10 O3' A B 19 -6.470 39.209 8.092 1.00 35.78 O
ATOM 11 C2' A B 19 -7.251 37.085 9.039 1.00 37.27 C
ATOM 12 O2' A B 19 -7.761 37.809 10.136 1.00 39.29 O
ATOM 13 C1' A B 19 -8.312 36.117 8.519 1.00 38.00 C
ATOM 14 N9 A B 19 -7.762 35.034 7.701 1.00 36.67 N
ATOM 15 C8 A B 19 -8.022 34.773 6.378 1.00 38.92 C
ATOM 16 N7 A B 19 -7.402 33.717 5.915 1.00 40.38 N
ATOM 17 C5 A B 19 -6.681 33.251 7.004 1.00 39.01 C
ATOM 18 C6 A B 19 -5.826 32.153 7.166 1.00 39.06 C
ATOM 19 N6 A B 19 -5.549 31.284 6.190 1.00 33.11 N
ATOM 20 N1 A B 19 -5.259 31.972 8.382 1.00 41.06 N
ATOM 21 C2 A B 19 -5.545 32.836 9.358 1.00 39.65 C
ATOM 22 N3 A B 19 -6.339 33.902 9.330 1.00 44.73 N
ATOM 23 C4 A B 19 -6.884 34.057 8.108 1.00 39.99 C
ATOM 24 P A B 20 -5.028 39.616 7.501 1.00 36.88 P
ATOM 25 OP1 A B 20 -4.906 41.069 7.777 1.00 33.35 O
ATOM 26 OP2 A B 20 -4.865 39.115 6.113 1.00 30.33 O
ATOM 27 O5' A B 20 -3.997 38.832 8.436 1.00 37.88 O
TER
ATOM 2 P A A 20 -5.028 39.616 7.501 1.00 36.88 P
ATOM 3 OP1 A A 20 -4.906 41.069 7.777 1.00 33.35 O
ATOM 4 OP2 A A 20 -4.865 39.115 6.113 1.00 30.33 O
ATOM 5 O5' A A 20 -3.997 38.832 8.436 1.00 37.88 O
ATOM 6 C5' A A 20 -4.132 38.848 9.863 1.00 39.40 C
ATOM 7 C4' A A 20 -3.448 37.645 10.478 1.00 41.88 C
ATOM 8 O4' A A 20 -4.114 36.429 10.041 1.00 44.86 O
ATOM 9 C3' A A 20 -1.987 37.440 10.103 1.00 45.25 C
ATOM 10 O3' A A 20 -1.107 38.232 10.907 1.00 45.31 O
ATOM 11 C2' A A 20 -1.801 35.938 10.316 1.00 47.93 C
ATOM 12 O2' A A 20 -1.553 35.563 11.660 1.00 49.82 O
ATOM 13 C1' A A 20 -3.156 35.395 9.857 1.00 45.37 C
ATOM 14 N9 A A 20 -3.199 34.946 8.462 1.00 44.57 N
ATOM 15 C8 A A 20 -3.810 35.560 7.398 1.00 45.08 C
ATOM 16 N7 A A 20 -3.706 34.897 6.274 1.00 44.26 N
ATOM 17 C5 A A 20 -2.968 33.773 6.614 1.00 44.91 C
ATOM 18 C6 A A 20 -2.519 32.669 5.861 1.00 43.97 C
ATOM 19 N6 A A 20 -2.768 32.506 4.562 1.00 40.03 N
ATOM 20 N1 A A 20 -1.799 31.722 6.502 1.00 44.20 N
ATOM 21 C2 A A 20 -1.560 31.879 7.807 1.00 47.59 C
ATOM 22 N3 A A 20 -1.932 32.868 8.623 1.00 50.09 N
ATOM 23 C4 A A 20 -2.642 33.794 7.956 1.00 45.32 C
ATOM 24 P C A 21 0.306 38.723 10.303 1.00 48.03 P
ATOM 25 OP1 C A 21 0.872 39.679 11.276 1.00 48.09 O
ATOM 26 OP2 C A 21 0.146 39.138 8.886 1.00 48.06 O
ATOM 27 O5' C A 21 1.202 37.409 10.308 1.00 44.73 O
TER
ATOM 1 O3' G B 18 -12.032 39.044 6.057 1.00 37.80 O
ATOM 2 P A B 19 -10.711 39.476 5.234 1.00 42.85 P
ATOM 3 OP1 A B 19 -10.084 40.529 6.075 1.00 39.56 O
ATOM 4 OP2 A B 19 -11.043 39.772 3.821 1.00 37.24 O
ATOM 5 O5' A B 19 -9.815 38.153 5.235 1.00 40.31 O
ATOM 6 C5' A B 19 -8.468 38.156 5.701 1.00 40.69 C
ATOM 7 C4' A B 19 -8.422 38.072 7.217 1.00 39.31 C
ATOM 8 O4' A B 19 -9.157 36.902 7.696 1.00 38.35 O
ATOM 9 C3' A B 19 -7.017 37.936 7.797 1.00 37.32 C
ATOM 10 O3' A B 19 -6.470 39.209 8.092 1.00 35.78 O
ATOM 11 C2' A B 19 -7.251 37.085 9.039 1.00 37.27 C
ATOM 12 O2' A B 19 -7.761 37.809 10.136 1.00 39.29 O
ATOM 13 C1' A B 19 -8.312 36.117 8.519 1.00 38.00 C
ATOM 14 N9 A B 19 -7.762 35.034 7.701 1.00 36.67 N
ATOM 15 C8 A B 19 -8.022 34.773 6.378 1.00 38.92 C
ATOM 16 N7 A B 19 -7.402 33.717 5.915 1.00 40.38 N
ATOM 17 C5 A B 19 -6.681 33.251 7.004 1.00 39.01 C
ATOM 18 C6 A B 19 -5.826 32.153 7.166 1.00 39.06 C
ATOM 19 N6 A B 19 -5.549 31.284 6.190 1.00 33.11 N
ATOM 20 N1 A B 19 -5.259 31.972 8.382 1.00 41.06 N
ATOM 21 C2 A B 19 -5.545 32.836 9.358 1.00 39.65 C
ATOM 22 N3 A B 19 -6.339 33.902 9.330 1.00 44.73 N
ATOM 23 C4 A B 19 -6.884 34.057 8.108 1.00 39.99 C
ATOM 24 P A B 20 -5.028 39.616 7.501 1.00 36.88 P
ATOM 25 OP1 A B 20 -4.906 41.069 7.777 1.00 33.35 O
ATOM 26 OP2 A B 20 -4.865 39.115 6.113 1.00 30.33 O
ATOM 27 O5' A B 20 -3.997 38.832 8.436 1.00 37.88 O
TER
Atoms:
OP1: (-4.906,41.069,7.777)
OP2: (-4.865,39.115,6.113)
C3': (-1.987,37.440,10.103)
C1': (-3.156,35.395,9.857)
C5': (-4.132,38.848,9.863)
O4': (-4.114,36.429,10.041)
C8: (-3.810,35.560,7.398)
O2': (-1.553,35.563,11.660)
C6: (-2.519,32.669,5.861)
C5: (-2.968,33.773,6.614)
C4: (-2.642,33.794,7.956)
P: (-5.028,39.616,7.501)
C4': (-3.448,37.645,10.478)
C2': (-1.801,35.938,10.316)
C2: (-1.560,31.879,7.807)
N1: (-1.799,31.722,6.502)
N3: (-1.932,32.868,8.623)
N6: (-2.768,32.506,4.562)
N7: (-3.706,34.897,6.274)
N9: (-3.199,34.946,8.462)
O5': (-3.997,38.832,8.436)
O3': (-1.107,38.232,10.907)
OP2: (-4.865,39.115,6.113)
C3': (-1.987,37.440,10.103)
C1': (-3.156,35.395,9.857)
C5': (-4.132,38.848,9.863)
O4': (-4.114,36.429,10.041)
C8: (-3.810,35.560,7.398)
O2': (-1.553,35.563,11.660)
C6: (-2.519,32.669,5.861)
C5: (-2.968,33.773,6.614)
C4: (-2.642,33.794,7.956)
P: (-5.028,39.616,7.501)
C4': (-3.448,37.645,10.478)
C2': (-1.801,35.938,10.316)
C2: (-1.560,31.879,7.807)
N1: (-1.799,31.722,6.502)
N3: (-1.932,32.868,8.623)
N6: (-2.768,32.506,4.562)
N7: (-3.706,34.897,6.274)
N9: (-3.199,34.946,8.462)
O5': (-3.997,38.832,8.436)
O3': (-1.107,38.232,10.907)
OP1: (-10.084,40.529,6.075)
OP2: (-11.043,39.772,3.821)
C3': (-7.017,37.936,7.797)
C1': (-8.312,36.117,8.519)
C5': (-8.468,38.156,5.701)
O4': (-9.157,36.902,7.696)
C8: (-8.022,34.773,6.378)
O2': (-7.761,37.809,10.136)
C6: (-5.826,32.153,7.166)
C5: (-6.681,33.251,7.004)
C4: (-6.884,34.057,8.108)
P: (-10.711,39.476,5.234)
C4': (-8.422,38.072,7.217)
C2': (-7.251,37.085,9.039)
C2: (-5.545,32.836,9.358)
N1: (-5.259,31.972,8.382)
N3: (-6.339,33.902,9.330)
N6: (-5.549,31.284,6.190)
N7: (-7.402,33.717,5.915)
N9: (-7.762,35.034,7.701)
O5': (-9.815,38.153,5.235)
O3': (-6.470,39.209,8.092)
OP2: (-11.043,39.772,3.821)
C3': (-7.017,37.936,7.797)
C1': (-8.312,36.117,8.519)
C5': (-8.468,38.156,5.701)
O4': (-9.157,36.902,7.696)
C8: (-8.022,34.773,6.378)
O2': (-7.761,37.809,10.136)
C6: (-5.826,32.153,7.166)
C5: (-6.681,33.251,7.004)
C4: (-6.884,34.057,8.108)
P: (-10.711,39.476,5.234)
C4': (-8.422,38.072,7.217)
C2': (-7.251,37.085,9.039)
C2: (-5.545,32.836,9.358)
N1: (-5.259,31.972,8.382)
N3: (-6.339,33.902,9.330)
N6: (-5.549,31.284,6.190)
N7: (-7.402,33.717,5.915)
N9: (-7.762,35.034,7.701)
O5': (-9.815,38.153,5.235)
O3': (-6.470,39.209,8.092)
Image (generated by PyMOL):