ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2NOK:A14:A13

Extra

PDB:
ATOM 1 O3' G A 13 -5.968 19.788 -7.557 1.00 74.14 O
ATOM 2 P U A 14 -4.656 18.918 -7.182 1.00 76.49 P
ATOM 3 OP1 U A 14 -5.118 17.548 -6.844 1.00 78.17 O
ATOM 4 OP2 U A 14 -3.811 19.637 -6.204 1.00 74.45 O
ATOM 5 O5' U A 14 -3.881 18.848 -8.571 1.00 76.56 O
ATOM 6 C5' U A 14 -4.398 17.998 -9.573 1.00 78.26 C
ATOM 7 C4' U A 14 -3.878 18.427 -10.917 1.00 80.04 C
ATOM 8 O4' U A 14 -3.728 19.853 -10.919 1.00 79.98 O
ATOM 9 C3' U A 14 -2.439 18.072 -11.170 1.00 82.47 C
ATOM 10 O3' U A 14 -2.289 16.662 -11.379 1.00 86.52 O
ATOM 11 C2' U A 14 -2.155 18.958 -12.378 1.00 80.09 C
ATOM 12 O2' U A 14 -2.852 18.508 -13.507 1.00 79.22 O
ATOM 13 C1' U A 14 -2.827 20.239 -11.931 1.00 78.98 C
ATOM 14 N1 U A 14 -1.986 21.296 -11.332 1.00 78.61 N
ATOM 15 C2 U A 14 -1.014 21.951 -12.072 1.00 78.90 C
ATOM 16 O2 U A 14 -0.760 21.701 -13.244 1.00 79.33 O
ATOM 17 N3 U A 14 -0.327 22.916 -11.376 1.00 77.56 N
ATOM 18 C4 U A 14 -0.515 23.284 -10.059 1.00 78.04 C
ATOM 19 O4 U A 14 0.167 24.173 -9.560 1.00 79.18 O
ATOM 20 C5 U A 14 -1.545 22.565 -9.366 1.00 78.28 C
ATOM 21 C6 U A 14 -2.229 21.624 -10.015 1.00 78.10 C
ATOM 22 P C A 15 -0.947 15.934 -10.872 1.00 88.06 P
ATOM 23 OP1 C A 15 -1.185 14.501 -11.132 1.00 88.55 O
ATOM 24 OP2 C A 15 -0.591 16.333 -9.484 1.00 87.03 O
ATOM 25 O5' C A 15 0.123 16.523 -11.916 1.00 87.31 O
TER

ATOM 1 P G B 13 -5.364 23.862 -4.043 1.00 68.50 P
ATOM 2 OP1 G B 13 -5.635 22.902 -2.975 1.00 69.75 O
ATOM 3 OP2 G B 13 -4.049 24.579 -4.141 1.00 66.70 O
ATOM 4 O5' G B 13 -5.513 23.076 -5.437 1.00 68.48 O
ATOM 5 C5' G B 13 -6.739 22.397 -5.726 1.00 69.80 C
ATOM 6 C4' G B 13 -6.831 22.123 -7.217 1.00 71.08 C
ATOM 7 O4' G B 13 -6.485 23.355 -7.905 1.00 70.84 O
ATOM 8 C3' G B 13 -5.794 21.180 -7.825 1.00 72.47 C
ATOM 9 O3' G B 13 -5.968 19.788 -7.557 1.00 74.14 O
ATOM 10 C2' G B 13 -5.911 21.537 -9.302 1.00 71.40 C
ATOM 11 O2' G B 13 -7.117 21.065 -9.850 1.00 72.09 O
ATOM 12 C1' G B 13 -6.036 23.051 -9.227 1.00 68.56 C
ATOM 13 N9 G B 13 -4.894 23.917 -9.580 1.00 67.23 N
ATOM 14 C8 G B 13 -4.220 24.763 -8.735 1.00 67.33 C
ATOM 15 N7 G B 13 -3.286 25.462 -9.332 1.00 66.70 N
ATOM 16 C5 G B 13 -3.356 25.070 -10.664 1.00 66.65 C
ATOM 17 C6 G B 13 -2.575 25.485 -11.775 1.00 67.76 C
ATOM 18 O6 G B 13 -1.637 26.323 -11.780 1.00 67.84 O
ATOM 19 N1 G B 13 -2.969 24.824 -12.955 1.00 67.21 N
ATOM 20 C2 G B 13 -3.977 23.889 -13.048 1.00 67.17 C
ATOM 21 N2 G B 13 -4.212 23.374 -14.274 1.00 66.97 N
ATOM 22 N3 G B 13 -4.709 23.508 -11.998 1.00 67.69 N
ATOM 23 C4 G B 13 -4.352 24.128 -10.840 1.00 66.69 C
ATOM 24 P U B 14 -4.656 18.918 -7.182 1.00 76.49 P
ATOM 25 OP1 U B 14 -5.118 17.548 -6.844 1.00 78.17 O
ATOM 26 OP2 U B 14 -3.811 19.637 -6.204 1.00 74.45 O
ATOM 27 O5' U B 14 -3.881 18.848 -8.571 1.00 76.56 O
TER

Atoms:
C4: (-0.515,23.284,-10.059)
N3: (-0.327,22.916,-11.376)
OP1: (-5.118,17.548,-6.844)
OP2: (-3.811,19.637,-6.204)
C2: (-1.014,21.951,-12.072)
C1': (-2.827,20.239,-11.931)
C3': (-2.439,18.072,-11.170)
O5': (-3.881,18.848,-8.571)
O4': (-3.728,19.853,-10.919)
C5': (-4.398,17.998,-9.573)
P: (-4.656,18.918,-7.182)
C4': (-3.878,18.427,-10.917)
C2': (-2.155,18.958,-12.378)
O2': (-2.852,18.508,-13.507)
N1: (-1.986,21.296,-11.332)
O4: (0.167,24.173,-9.560)
O2: (-0.760,21.701,-13.244)
C6: (-2.229,21.624,-10.015)
C5: (-1.545,22.565,-9.366)
O3': (-2.289,16.662,-11.379)
OP1: (-5.635,22.902,-2.975)
OP2: (-4.049,24.579,-4.141)
C3': (-5.794,21.180,-7.825)
C1': (-6.036,23.051,-9.227)
C5': (-6.739,22.397,-5.726)
O6: (-1.637,26.323,-11.780)
O4': (-6.485,23.355,-7.905)
C8: (-4.220,24.763,-8.735)
C2: (-3.977,23.889,-13.048)
C6: (-2.575,25.485,-11.775)
C5: (-3.356,25.070,-10.664)
C4: (-4.352,24.128,-10.840)
P: (-5.364,23.862,-4.043)
C4': (-6.831,22.123,-7.217)
C2': (-5.911,21.537,-9.302)
O2': (-7.117,21.065,-9.850)
N1: (-2.969,24.824,-12.955)
N2: (-4.212,23.374,-14.274)
N3: (-4.709,23.508,-11.998)
N7: (-3.286,25.462,-9.332)
N9: (-4.894,23.917,-9.580)
O5': (-5.513,23.076,-5.437)
O3': (-5.968,19.788,-7.557)
Image (generated by PyMOL):
PyMOL image
show in jmol