ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUR:R8:R88

Extra

PDB:
ATOM 1 O3' C A 7 -11.651 8.534 22.072 1.00 84.13 O
ATOM 2 P A A 8 -10.820 7.626 21.053 1.00 80.04 P
ATOM 3 OP1 A A 8 -10.548 8.431 19.840 1.00 78.26 O
ATOM 4 OP2 A A 8 -11.540 6.338 20.925 1.00 78.98 O
ATOM 5 O5' A A 8 -9.434 7.390 21.824 1.00 82.52 O
ATOM 6 C5' A A 8 -9.081 6.100 22.326 1.00 84.61 C
ATOM 7 C4' A A 8 -9.375 5.980 23.812 1.00 91.16 C
ATOM 8 O4' A A 8 -10.716 5.469 24.050 1.00 92.92 O
ATOM 9 C3' A A 8 -8.494 4.990 24.554 1.00 92.91 C
ATOM 10 O3' A A 8 -7.217 5.552 24.837 1.00 94.96 O
ATOM 11 C2' A A 8 -9.329 4.741 25.811 1.00 96.53 C
ATOM 12 O2' A A 8 -9.264 5.783 26.769 1.00 99.39 O
ATOM 13 C1' A A 8 -10.730 4.649 25.213 1.00 95.60 C
ATOM 14 N9 A A 8 -11.129 3.271 24.879 1.00 94.93 N
ATOM 15 C8 A A 8 -11.436 2.776 23.639 1.00 91.66 C
ATOM 16 N7 A A 8 -11.760 1.503 23.625 1.00 90.54 N
ATOM 17 C5 A A 8 -11.662 1.123 24.951 1.00 94.31 C
ATOM 18 C6 A A 8 -11.874 -0.113 25.606 1.00 95.64 C
ATOM 19 N6 A A 8 -12.250 -1.230 24.973 1.00 92.99 N
ATOM 20 N1 A A 8 -11.684 -0.160 26.946 1.00 99.72 N
ATOM 21 C2 A A 8 -11.304 0.958 27.586 1.00101.84 C
ATOM 22 N3 A A 8 -11.078 2.174 27.078 1.00101.04 N
ATOM 23 C4 A A 8 -11.272 2.197 25.741 1.00 97.19 C
ATOM 24 P C A 9 -5.913 4.624 24.860 1.00 94.19 P
ATOM 25 OP1 C A 9 -4.794 5.443 25.379 1.00 96.99 O
ATOM 26 OP2 C A 9 -5.805 3.982 23.533 1.00 89.97 O
ATOM 27 O5' C A 9 -6.256 3.487 25.938 1.00 97.56 O
TER

ATOM 1 O3' G B 87 -14.255 -3.243 28.060 1.00 89.87 O
ATOM 2 P A B 88 -14.859 -3.033 29.525 1.00100.00 P
ATOM 3 OP1 A B 88 -13.764 -3.223 30.506 1.00102.66 O
ATOM 4 OP2 A B 88 -16.090 -3.850 29.640 1.00101.81 O
ATOM 5 O5' A B 88 -15.274 -1.484 29.524 1.00102.61 O
ATOM 6 C5' A B 88 -14.465 -0.483 28.905 1.00103.55 C
ATOM 7 C4' A B 88 -14.596 0.873 29.586 1.00109.32 C
ATOM 8 O4' A B 88 -13.953 1.877 28.769 1.00108.13 O
ATOM 9 C3' A B 88 -16.025 1.355 29.856 1.00113.48 C
ATOM 10 O3' A B 88 -16.259 1.534 31.273 1.00120.42 O
ATOM 11 C2' A B 88 -16.200 2.635 29.029 1.00111.83 C
ATOM 12 O2' A B 88 -16.770 3.698 29.766 1.00115.82 O
ATOM 13 C1' A B 88 -14.787 3.001 28.580 1.00109.82 C
ATOM 14 N9 A B 88 -14.693 3.397 27.172 1.00106.53 N
ATOM 15 C8 A B 88 -14.431 4.654 26.703 1.00106.14 C
ATOM 16 N7 A B 88 -14.400 4.740 25.396 1.00102.82 N
ATOM 17 C5 A B 88 -14.657 3.449 24.968 1.00100.38 C
ATOM 18 C6 A B 88 -14.762 2.873 23.680 1.00 97.05 C
ATOM 19 N6 A B 88 -14.604 3.565 22.544 1.00 94.54 N
ATOM 20 N1 A B 88 -15.027 1.548 23.605 1.00 96.20 N
ATOM 21 C2 A B 88 -15.181 0.850 24.739 1.00 98.05 C
ATOM 22 N3 A B 88 -15.107 1.284 25.999 1.00101.25 N
ATOM 23 C4 A B 88 -14.839 2.603 26.051 1.00102.39 C
ATOM 24 P U B 89 -16.199 0.252 32.237 1.00125.17 P
ATOM 25 OP1 U B 89 -14.765 -0.027 32.478 1.00125.80 O
ATOM 26 OP2 U B 89 -17.061 -0.803 31.652 1.00123.40 O
ATOM 27 O5' U B 89 -16.861 0.695 33.628 1.00131.12 O
TER

Atoms:
OP1: (-10.548,8.431,19.840)
OP2: (-11.540,6.338,20.925)
C3': (-8.494,4.990,24.554)
C1': (-10.730,4.649,25.213)
C5': (-9.081,6.100,22.326)
O4': (-10.716,5.469,24.050)
C8: (-11.436,2.776,23.639)
O2': (-9.264,5.783,26.769)
C6: (-11.874,-0.113,25.606)
C5: (-11.662,1.123,24.951)
C4: (-11.272,2.197,25.741)
P: (-10.820,7.626,21.053)
C4': (-9.375,5.980,23.812)
C2': (-9.329,4.741,25.811)
C2: (-11.304,0.958,27.586)
N1: (-11.684,-0.160,26.946)
N3: (-11.078,2.174,27.078)
N6: (-12.250,-1.230,24.973)
N7: (-11.760,1.503,23.625)
N9: (-11.129,3.271,24.879)
O5': (-9.434,7.390,21.824)
O3': (-7.217,5.552,24.837)
OP1: (-13.764,-3.223,30.506)
OP2: (-16.090,-3.850,29.640)
C3': (-16.025,1.355,29.856)
C1': (-14.787,3.001,28.580)
C5': (-14.465,-0.483,28.905)
O4': (-13.953,1.877,28.769)
C8: (-14.431,4.654,26.703)
O2': (-16.770,3.698,29.766)
C6: (-14.762,2.873,23.680)
C5: (-14.657,3.449,24.968)
C4: (-14.839,2.603,26.051)
P: (-14.859,-3.033,29.525)
C4': (-14.596,0.873,29.586)
C2': (-16.200,2.635,29.029)
C2: (-15.181,0.850,24.739)
N1: (-15.027,1.548,23.605)
N3: (-15.107,1.284,25.999)
N6: (-14.604,3.565,22.544)
N7: (-14.400,4.740,25.396)
N9: (-14.693,3.397,27.172)
O5': (-15.274,-1.484,29.524)
O3': (-16.259,1.534,31.273)
Image (generated by PyMOL):
PyMOL image
show in jmol