Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0499:0496
Extra
PDB:
ATOM 1 O3' U A 498 19.697 149.773 65.376 1.00 79.79 O
ATOM 2 P A A 499 18.830 149.433 64.065 1.00 79.04 P
ATOM 3 OP1 A A 499 17.731 150.424 63.936 1.00 79.63 O
ATOM 4 OP2 A A 499 18.496 147.985 64.148 1.00 81.26 O
ATOM 5 O5' A A 499 19.861 149.660 62.869 1.00 73.12 O
ATOM 6 C5' A A 499 20.674 150.850 62.813 1.00 64.88 C
ATOM 7 C4' A A 499 21.683 150.753 61.691 1.00 59.64 C
ATOM 8 O4' A A 499 20.999 150.474 60.440 1.00 57.77 O
ATOM 9 C3' A A 499 22.449 152.041 61.426 1.00 57.07 C
ATOM 10 O3' A A 499 23.571 152.177 62.290 1.00 53.22 O
ATOM 11 C2' A A 499 22.849 151.888 59.967 1.00 56.99 C
ATOM 12 O2' A A 499 23.967 151.051 59.798 1.00 57.39 O
ATOM 13 C1' A A 499 21.607 151.205 59.386 1.00 57.14 C
ATOM 14 N9 A A 499 20.632 152.175 58.882 1.00 56.97 N
ATOM 15 C8 A A 499 19.459 152.577 59.474 1.00 56.86 C
ATOM 16 N7 A A 499 18.819 153.502 58.805 1.00 56.78 N
ATOM 17 C5 A A 499 19.616 153.718 57.691 1.00 57.26 C
ATOM 18 C6 A A 499 19.494 154.590 56.595 1.00 56.99 C
ATOM 19 N6 A A 499 18.486 155.448 56.440 1.00 56.08 N
ATOM 20 N1 A A 499 20.460 154.554 55.654 1.00 57.31 N
ATOM 21 C2 A A 499 21.474 153.700 55.814 1.00 57.26 C
ATOM 22 N3 A A 499 21.703 152.835 56.799 1.00 57.18 N
ATOM 23 C4 A A 499 20.727 152.896 57.718 1.00 56.63 C
ATOM 24 P G A 500 23.717 153.486 63.210 1.00 51.49 P
ATOM 25 OP1 G A 500 24.826 153.239 64.159 1.00 50.40 O
ATOM 26 OP2 G A 500 22.377 153.866 63.738 1.00 49.03 O
ATOM 27 O5' G A 500 24.187 154.605 62.184 1.00 49.16 O
TER
ATOM 1 O3' A B 495 10.449 153.654 57.683 1.00 53.99 O
ATOM 2 P A B 496 11.416 154.674 58.454 1.00 56.13 P
ATOM 3 OP1 A B 496 10.617 155.413 59.473 1.00 53.05 O
ATOM 4 OP2 A B 496 12.172 155.435 57.416 1.00 55.18 O
ATOM 5 O5' A B 496 12.442 153.715 59.207 1.00 55.80 O
ATOM 6 C5' A B 496 11.988 152.724 60.147 1.00 54.87 C
ATOM 7 C4' A B 496 13.118 151.791 60.492 1.00 54.73 C
ATOM 8 O4' A B 496 13.560 151.125 59.286 1.00 54.94 O
ATOM 9 C3' A B 496 14.356 152.479 61.038 1.00 55.70 C
ATOM 10 O3' A B 496 14.239 152.592 62.452 1.00 57.43 O
ATOM 11 C2' A B 496 15.471 151.516 60.648 1.00 55.30 C
ATOM 12 O2' A B 496 15.569 150.428 61.542 1.00 57.87 O
ATOM 13 C1' A B 496 14.966 150.982 59.305 1.00 53.20 C
ATOM 14 N9 A B 496 15.499 151.631 58.109 1.00 50.84 N
ATOM 15 C8 A B 496 15.049 152.775 57.504 1.00 50.30 C
ATOM 16 N7 A B 496 15.687 153.077 56.401 1.00 50.21 N
ATOM 17 C5 A B 496 16.632 152.071 56.276 1.00 50.44 C
ATOM 18 C6 A B 496 17.619 151.811 55.305 1.00 49.91 C
ATOM 19 N6 A B 496 17.801 152.551 54.208 1.00 47.78 N
ATOM 20 N1 A B 496 18.413 150.738 55.495 1.00 49.29 N
ATOM 21 C2 A B 496 18.210 149.974 56.576 1.00 48.55 C
ATOM 22 N3 A B 496 17.306 150.102 57.543 1.00 49.79 N
ATOM 23 C4 A B 496 16.540 151.184 57.334 1.00 50.85 C
ATOM 24 P A B 497 14.321 154.031 63.160 1.00 61.08 P
ATOM 25 OP1 A B 497 13.539 153.943 64.417 1.00 61.79 O
ATOM 26 OP2 A B 497 14.012 155.096 62.173 1.00 59.50 O
ATOM 27 O5' A B 497 15.841 154.157 63.597 1.00 61.18 O
TER
ATOM 2 P A A 499 18.830 149.433 64.065 1.00 79.04 P
ATOM 3 OP1 A A 499 17.731 150.424 63.936 1.00 79.63 O
ATOM 4 OP2 A A 499 18.496 147.985 64.148 1.00 81.26 O
ATOM 5 O5' A A 499 19.861 149.660 62.869 1.00 73.12 O
ATOM 6 C5' A A 499 20.674 150.850 62.813 1.00 64.88 C
ATOM 7 C4' A A 499 21.683 150.753 61.691 1.00 59.64 C
ATOM 8 O4' A A 499 20.999 150.474 60.440 1.00 57.77 O
ATOM 9 C3' A A 499 22.449 152.041 61.426 1.00 57.07 C
ATOM 10 O3' A A 499 23.571 152.177 62.290 1.00 53.22 O
ATOM 11 C2' A A 499 22.849 151.888 59.967 1.00 56.99 C
ATOM 12 O2' A A 499 23.967 151.051 59.798 1.00 57.39 O
ATOM 13 C1' A A 499 21.607 151.205 59.386 1.00 57.14 C
ATOM 14 N9 A A 499 20.632 152.175 58.882 1.00 56.97 N
ATOM 15 C8 A A 499 19.459 152.577 59.474 1.00 56.86 C
ATOM 16 N7 A A 499 18.819 153.502 58.805 1.00 56.78 N
ATOM 17 C5 A A 499 19.616 153.718 57.691 1.00 57.26 C
ATOM 18 C6 A A 499 19.494 154.590 56.595 1.00 56.99 C
ATOM 19 N6 A A 499 18.486 155.448 56.440 1.00 56.08 N
ATOM 20 N1 A A 499 20.460 154.554 55.654 1.00 57.31 N
ATOM 21 C2 A A 499 21.474 153.700 55.814 1.00 57.26 C
ATOM 22 N3 A A 499 21.703 152.835 56.799 1.00 57.18 N
ATOM 23 C4 A A 499 20.727 152.896 57.718 1.00 56.63 C
ATOM 24 P G A 500 23.717 153.486 63.210 1.00 51.49 P
ATOM 25 OP1 G A 500 24.826 153.239 64.159 1.00 50.40 O
ATOM 26 OP2 G A 500 22.377 153.866 63.738 1.00 49.03 O
ATOM 27 O5' G A 500 24.187 154.605 62.184 1.00 49.16 O
TER
ATOM 1 O3' A B 495 10.449 153.654 57.683 1.00 53.99 O
ATOM 2 P A B 496 11.416 154.674 58.454 1.00 56.13 P
ATOM 3 OP1 A B 496 10.617 155.413 59.473 1.00 53.05 O
ATOM 4 OP2 A B 496 12.172 155.435 57.416 1.00 55.18 O
ATOM 5 O5' A B 496 12.442 153.715 59.207 1.00 55.80 O
ATOM 6 C5' A B 496 11.988 152.724 60.147 1.00 54.87 C
ATOM 7 C4' A B 496 13.118 151.791 60.492 1.00 54.73 C
ATOM 8 O4' A B 496 13.560 151.125 59.286 1.00 54.94 O
ATOM 9 C3' A B 496 14.356 152.479 61.038 1.00 55.70 C
ATOM 10 O3' A B 496 14.239 152.592 62.452 1.00 57.43 O
ATOM 11 C2' A B 496 15.471 151.516 60.648 1.00 55.30 C
ATOM 12 O2' A B 496 15.569 150.428 61.542 1.00 57.87 O
ATOM 13 C1' A B 496 14.966 150.982 59.305 1.00 53.20 C
ATOM 14 N9 A B 496 15.499 151.631 58.109 1.00 50.84 N
ATOM 15 C8 A B 496 15.049 152.775 57.504 1.00 50.30 C
ATOM 16 N7 A B 496 15.687 153.077 56.401 1.00 50.21 N
ATOM 17 C5 A B 496 16.632 152.071 56.276 1.00 50.44 C
ATOM 18 C6 A B 496 17.619 151.811 55.305 1.00 49.91 C
ATOM 19 N6 A B 496 17.801 152.551 54.208 1.00 47.78 N
ATOM 20 N1 A B 496 18.413 150.738 55.495 1.00 49.29 N
ATOM 21 C2 A B 496 18.210 149.974 56.576 1.00 48.55 C
ATOM 22 N3 A B 496 17.306 150.102 57.543 1.00 49.79 N
ATOM 23 C4 A B 496 16.540 151.184 57.334 1.00 50.85 C
ATOM 24 P A B 497 14.321 154.031 63.160 1.00 61.08 P
ATOM 25 OP1 A B 497 13.539 153.943 64.417 1.00 61.79 O
ATOM 26 OP2 A B 497 14.012 155.096 62.173 1.00 59.50 O
ATOM 27 O5' A B 497 15.841 154.157 63.597 1.00 61.18 O
TER
Atoms:
OP1: (17.731,150.424,63.936)
OP2: (18.496,147.985,64.148)
C3': (22.449,152.041,61.426)
C1': (21.607,151.205,59.386)
C5': (20.674,150.850,62.813)
O4': (20.999,150.474,60.440)
C8: (19.459,152.577,59.474)
O2': (23.967,151.051,59.798)
C6: (19.494,154.590,56.595)
C5: (19.616,153.718,57.691)
C4: (20.727,152.896,57.718)
P: (18.830,149.433,64.065)
C4': (21.683,150.753,61.691)
C2': (22.849,151.888,59.967)
C2: (21.474,153.700,55.814)
N1: (20.460,154.554,55.654)
N3: (21.703,152.835,56.799)
N6: (18.486,155.448,56.440)
N7: (18.819,153.502,58.805)
N9: (20.632,152.175,58.882)
O5': (19.861,149.660,62.869)
O3': (23.571,152.177,62.290)
OP2: (18.496,147.985,64.148)
C3': (22.449,152.041,61.426)
C1': (21.607,151.205,59.386)
C5': (20.674,150.850,62.813)
O4': (20.999,150.474,60.440)
C8: (19.459,152.577,59.474)
O2': (23.967,151.051,59.798)
C6: (19.494,154.590,56.595)
C5: (19.616,153.718,57.691)
C4: (20.727,152.896,57.718)
P: (18.830,149.433,64.065)
C4': (21.683,150.753,61.691)
C2': (22.849,151.888,59.967)
C2: (21.474,153.700,55.814)
N1: (20.460,154.554,55.654)
N3: (21.703,152.835,56.799)
N6: (18.486,155.448,56.440)
N7: (18.819,153.502,58.805)
N9: (20.632,152.175,58.882)
O5': (19.861,149.660,62.869)
O3': (23.571,152.177,62.290)
OP1: (10.617,155.413,59.473)
OP2: (12.172,155.435,57.416)
C3': (14.356,152.479,61.038)
C1': (14.966,150.982,59.305)
C5': (11.988,152.724,60.147)
O4': (13.560,151.125,59.286)
C8: (15.049,152.775,57.504)
O2': (15.569,150.428,61.542)
C6: (17.619,151.811,55.305)
C5: (16.632,152.071,56.276)
C4: (16.540,151.184,57.334)
P: (11.416,154.674,58.454)
C4': (13.118,151.791,60.492)
C2': (15.471,151.516,60.648)
C2: (18.210,149.974,56.576)
N1: (18.413,150.738,55.495)
N3: (17.306,150.102,57.543)
N6: (17.801,152.551,54.208)
N7: (15.687,153.077,56.401)
N9: (15.499,151.631,58.109)
O5': (12.442,153.715,59.207)
O3': (14.239,152.592,62.452)
OP2: (12.172,155.435,57.416)
C3': (14.356,152.479,61.038)
C1': (14.966,150.982,59.305)
C5': (11.988,152.724,60.147)
O4': (13.560,151.125,59.286)
C8: (15.049,152.775,57.504)
O2': (15.569,150.428,61.542)
C6: (17.619,151.811,55.305)
C5: (16.632,152.071,56.276)
C4: (16.540,151.184,57.334)
P: (11.416,154.674,58.454)
C4': (13.118,151.791,60.492)
C2': (15.471,151.516,60.648)
C2: (18.210,149.974,56.576)
N1: (18.413,150.738,55.495)
N3: (17.306,150.102,57.543)
N6: (17.801,152.551,54.208)
N7: (15.687,153.077,56.401)
N9: (15.499,151.631,58.109)
O5': (12.442,153.715,59.207)
O3': (14.239,152.592,62.452)
Image (generated by PyMOL):