Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02517:02516
Extra
PDB:
ATOM 1 O3' A A2516 41.696 135.488 128.895 1.00 54.14 O
ATOM 2 P A A2517 42.923 134.971 129.784 1.00 53.70 P
ATOM 3 OP1 A A2517 43.631 133.942 128.980 1.00 54.03 O
ATOM 4 OP2 A A2517 42.440 134.641 131.149 1.00 53.24 O
ATOM 5 O5' A A2517 43.842 136.257 129.902 1.00 51.13 O
ATOM 6 C5' A A2517 44.466 136.782 128.736 1.00 49.37 C
ATOM 7 C4' A A2517 45.407 137.883 129.105 1.00 47.11 C
ATOM 8 O4' A A2517 44.646 139.037 129.529 1.00 45.50 O
ATOM 9 C3' A A2517 46.309 137.607 130.287 1.00 46.07 C
ATOM 10 O3' A A2517 47.416 136.780 129.983 1.00 46.03 O
ATOM 11 C2' A A2517 46.709 139.013 130.680 1.00 46.12 C
ATOM 12 O2' A A2517 47.654 139.542 129.770 1.00 43.57 O
ATOM 13 C1' A A2517 45.367 139.734 130.527 1.00 45.87 C
ATOM 14 N9 A A2517 44.578 139.696 131.757 1.00 45.51 N
ATOM 15 C8 A A2517 43.537 138.857 132.075 1.00 46.01 C
ATOM 16 N7 A A2517 43.044 139.056 133.275 1.00 46.65 N
ATOM 17 C5 A A2517 43.813 140.095 133.780 1.00 46.21 C
ATOM 18 C6 A A2517 43.798 140.768 135.014 1.00 46.81 C
ATOM 19 N6 A A2517 42.957 140.479 136.005 1.00 46.54 N
ATOM 20 N1 A A2517 44.694 141.763 135.197 1.00 48.05 N
ATOM 21 C2 A A2517 45.544 142.053 134.197 1.00 48.15 C
ATOM 22 N3 A A2517 45.657 141.489 132.994 1.00 45.07 N
ATOM 23 C4 A A2517 44.754 140.506 132.850 1.00 45.60 C
ATOM 24 P G A2518 47.999 135.822 131.126 1.00 48.08 P
ATOM 25 OP1 G A2518 49.060 134.976 130.534 1.00 48.76 O
ATOM 26 OP2 G A2518 46.842 135.181 131.807 1.00 47.72 O
ATOM 27 O5' G A2518 48.710 136.838 132.120 1.00 47.14 O
TER
ATOM 1 O3' C B2515 36.263 134.262 130.995 1.00 63.84 O
ATOM 2 P A B2516 37.707 133.910 131.587 1.00 65.23 P
ATOM 3 OP1 A B2516 38.001 132.512 131.171 1.00 64.82 O
ATOM 4 OP2 A B2516 37.738 134.274 133.031 1.00 62.19 O
ATOM 5 O5' A B2516 38.662 134.911 130.801 1.00 61.89 O
ATOM 6 C5' A B2516 38.590 135.001 129.369 1.00 58.52 C
ATOM 7 C4' A B2516 39.371 136.189 128.876 1.00 55.12 C
ATOM 8 O4' A B2516 38.698 137.416 129.243 1.00 55.66 O
ATOM 9 C3' A B2516 40.745 136.352 129.478 1.00 53.90 C
ATOM 10 O3' A B2516 41.696 135.488 128.895 1.00 54.14 O
ATOM 11 C2' A B2516 41.026 137.819 129.216 1.00 53.41 C
ATOM 12 O2' A B2516 41.371 138.049 127.865 1.00 50.24 O
ATOM 13 C1' A B2516 39.657 138.426 129.526 1.00 54.32 C
ATOM 14 N9 A B2516 39.512 138.809 130.935 1.00 55.99 N
ATOM 15 C8 A B2516 38.795 138.156 131.914 1.00 57.03 C
ATOM 16 N7 A B2516 38.875 138.721 133.095 1.00 57.77 N
ATOM 17 C5 A B2516 39.690 139.824 132.883 1.00 56.75 C
ATOM 18 C6 A B2516 40.167 140.831 133.746 1.00 55.94 C
ATOM 19 N6 A B2516 39.886 140.890 135.048 1.00 54.43 N
ATOM 20 N1 A B2516 40.957 141.785 133.217 1.00 55.94 N
ATOM 21 C2 A B2516 41.251 141.724 131.913 1.00 56.38 C
ATOM 22 N3 A B2516 40.872 140.830 131.002 1.00 56.38 N
ATOM 23 C4 A B2516 40.083 139.896 131.556 1.00 56.28 C
ATOM 24 P A B2517 42.923 134.971 129.784 1.00 53.70 P
ATOM 25 OP1 A B2517 43.631 133.942 128.980 1.00 54.03 O
ATOM 26 OP2 A B2517 42.440 134.641 131.149 1.00 53.24 O
ATOM 27 O5' A B2517 43.842 136.257 129.902 1.00 51.13 O
TER
ATOM 2 P A A2517 42.923 134.971 129.784 1.00 53.70 P
ATOM 3 OP1 A A2517 43.631 133.942 128.980 1.00 54.03 O
ATOM 4 OP2 A A2517 42.440 134.641 131.149 1.00 53.24 O
ATOM 5 O5' A A2517 43.842 136.257 129.902 1.00 51.13 O
ATOM 6 C5' A A2517 44.466 136.782 128.736 1.00 49.37 C
ATOM 7 C4' A A2517 45.407 137.883 129.105 1.00 47.11 C
ATOM 8 O4' A A2517 44.646 139.037 129.529 1.00 45.50 O
ATOM 9 C3' A A2517 46.309 137.607 130.287 1.00 46.07 C
ATOM 10 O3' A A2517 47.416 136.780 129.983 1.00 46.03 O
ATOM 11 C2' A A2517 46.709 139.013 130.680 1.00 46.12 C
ATOM 12 O2' A A2517 47.654 139.542 129.770 1.00 43.57 O
ATOM 13 C1' A A2517 45.367 139.734 130.527 1.00 45.87 C
ATOM 14 N9 A A2517 44.578 139.696 131.757 1.00 45.51 N
ATOM 15 C8 A A2517 43.537 138.857 132.075 1.00 46.01 C
ATOM 16 N7 A A2517 43.044 139.056 133.275 1.00 46.65 N
ATOM 17 C5 A A2517 43.813 140.095 133.780 1.00 46.21 C
ATOM 18 C6 A A2517 43.798 140.768 135.014 1.00 46.81 C
ATOM 19 N6 A A2517 42.957 140.479 136.005 1.00 46.54 N
ATOM 20 N1 A A2517 44.694 141.763 135.197 1.00 48.05 N
ATOM 21 C2 A A2517 45.544 142.053 134.197 1.00 48.15 C
ATOM 22 N3 A A2517 45.657 141.489 132.994 1.00 45.07 N
ATOM 23 C4 A A2517 44.754 140.506 132.850 1.00 45.60 C
ATOM 24 P G A2518 47.999 135.822 131.126 1.00 48.08 P
ATOM 25 OP1 G A2518 49.060 134.976 130.534 1.00 48.76 O
ATOM 26 OP2 G A2518 46.842 135.181 131.807 1.00 47.72 O
ATOM 27 O5' G A2518 48.710 136.838 132.120 1.00 47.14 O
TER
ATOM 1 O3' C B2515 36.263 134.262 130.995 1.00 63.84 O
ATOM 2 P A B2516 37.707 133.910 131.587 1.00 65.23 P
ATOM 3 OP1 A B2516 38.001 132.512 131.171 1.00 64.82 O
ATOM 4 OP2 A B2516 37.738 134.274 133.031 1.00 62.19 O
ATOM 5 O5' A B2516 38.662 134.911 130.801 1.00 61.89 O
ATOM 6 C5' A B2516 38.590 135.001 129.369 1.00 58.52 C
ATOM 7 C4' A B2516 39.371 136.189 128.876 1.00 55.12 C
ATOM 8 O4' A B2516 38.698 137.416 129.243 1.00 55.66 O
ATOM 9 C3' A B2516 40.745 136.352 129.478 1.00 53.90 C
ATOM 10 O3' A B2516 41.696 135.488 128.895 1.00 54.14 O
ATOM 11 C2' A B2516 41.026 137.819 129.216 1.00 53.41 C
ATOM 12 O2' A B2516 41.371 138.049 127.865 1.00 50.24 O
ATOM 13 C1' A B2516 39.657 138.426 129.526 1.00 54.32 C
ATOM 14 N9 A B2516 39.512 138.809 130.935 1.00 55.99 N
ATOM 15 C8 A B2516 38.795 138.156 131.914 1.00 57.03 C
ATOM 16 N7 A B2516 38.875 138.721 133.095 1.00 57.77 N
ATOM 17 C5 A B2516 39.690 139.824 132.883 1.00 56.75 C
ATOM 18 C6 A B2516 40.167 140.831 133.746 1.00 55.94 C
ATOM 19 N6 A B2516 39.886 140.890 135.048 1.00 54.43 N
ATOM 20 N1 A B2516 40.957 141.785 133.217 1.00 55.94 N
ATOM 21 C2 A B2516 41.251 141.724 131.913 1.00 56.38 C
ATOM 22 N3 A B2516 40.872 140.830 131.002 1.00 56.38 N
ATOM 23 C4 A B2516 40.083 139.896 131.556 1.00 56.28 C
ATOM 24 P A B2517 42.923 134.971 129.784 1.00 53.70 P
ATOM 25 OP1 A B2517 43.631 133.942 128.980 1.00 54.03 O
ATOM 26 OP2 A B2517 42.440 134.641 131.149 1.00 53.24 O
ATOM 27 O5' A B2517 43.842 136.257 129.902 1.00 51.13 O
TER
Atoms:
OP1: (43.631,133.942,128.980)
OP2: (42.440,134.641,131.149)
C3': (46.309,137.607,130.287)
C1': (45.367,139.734,130.527)
C5': (44.466,136.782,128.736)
O4': (44.646,139.037,129.529)
C8: (43.537,138.857,132.075)
O2': (47.654,139.542,129.770)
C6: (43.798,140.768,135.014)
C5: (43.813,140.095,133.780)
C4: (44.754,140.506,132.850)
P: (42.923,134.971,129.784)
C4': (45.407,137.883,129.105)
C2': (46.709,139.013,130.680)
C2: (45.544,142.053,134.197)
N1: (44.694,141.763,135.197)
N3: (45.657,141.489,132.994)
N6: (42.957,140.479,136.005)
N7: (43.044,139.056,133.275)
N9: (44.578,139.696,131.757)
O5': (43.842,136.257,129.902)
O3': (47.416,136.780,129.983)
OP2: (42.440,134.641,131.149)
C3': (46.309,137.607,130.287)
C1': (45.367,139.734,130.527)
C5': (44.466,136.782,128.736)
O4': (44.646,139.037,129.529)
C8: (43.537,138.857,132.075)
O2': (47.654,139.542,129.770)
C6: (43.798,140.768,135.014)
C5: (43.813,140.095,133.780)
C4: (44.754,140.506,132.850)
P: (42.923,134.971,129.784)
C4': (45.407,137.883,129.105)
C2': (46.709,139.013,130.680)
C2: (45.544,142.053,134.197)
N1: (44.694,141.763,135.197)
N3: (45.657,141.489,132.994)
N6: (42.957,140.479,136.005)
N7: (43.044,139.056,133.275)
N9: (44.578,139.696,131.757)
O5': (43.842,136.257,129.902)
O3': (47.416,136.780,129.983)
OP1: (38.001,132.512,131.171)
OP2: (37.738,134.274,133.031)
C3': (40.745,136.352,129.478)
C1': (39.657,138.426,129.526)
C5': (38.590,135.001,129.369)
O4': (38.698,137.416,129.243)
C8: (38.795,138.156,131.914)
O2': (41.371,138.049,127.865)
C6: (40.167,140.831,133.746)
C5: (39.690,139.824,132.883)
C4: (40.083,139.896,131.556)
P: (37.707,133.910,131.587)
C4': (39.371,136.189,128.876)
C2': (41.026,137.819,129.216)
C2: (41.251,141.724,131.913)
N1: (40.957,141.785,133.217)
N3: (40.872,140.830,131.002)
N6: (39.886,140.890,135.048)
N7: (38.875,138.721,133.095)
N9: (39.512,138.809,130.935)
O5': (38.662,134.911,130.801)
O3': (41.696,135.488,128.895)
OP2: (37.738,134.274,133.031)
C3': (40.745,136.352,129.478)
C1': (39.657,138.426,129.526)
C5': (38.590,135.001,129.369)
O4': (38.698,137.416,129.243)
C8: (38.795,138.156,131.914)
O2': (41.371,138.049,127.865)
C6: (40.167,140.831,133.746)
C5: (39.690,139.824,132.883)
C4: (40.083,139.896,131.556)
P: (37.707,133.910,131.587)
C4': (39.371,136.189,128.876)
C2': (41.026,137.819,129.216)
C2: (41.251,141.724,131.913)
N1: (40.957,141.785,133.217)
N3: (40.872,140.830,131.002)
N6: (39.886,140.890,135.048)
N7: (38.875,138.721,133.095)
N9: (39.512,138.809,130.935)
O5': (38.662,134.911,130.801)
O3': (41.696,135.488,128.895)
Image (generated by PyMOL):