Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0425:0424
Extra
PDB:
ATOM 1 O3' A A 424 55.122 114.241 18.852 1.00 43.11 O
ATOM 2 P A A 425 54.931 114.597 20.406 1.00 48.67 P
ATOM 3 OP1 A A 425 53.678 115.402 20.507 1.00 47.26 O
ATOM 4 OP2 A A 425 56.210 115.134 20.972 1.00 46.96 O
ATOM 5 O5' A A 425 54.637 113.185 21.080 1.00 47.75 O
ATOM 6 C5' A A 425 53.395 112.493 20.832 1.00 45.67 C
ATOM 7 C4' A A 425 53.444 111.119 21.444 1.00 44.79 C
ATOM 8 O4' A A 425 54.389 110.290 20.724 1.00 44.09 O
ATOM 9 C3' A A 425 53.951 111.108 22.872 1.00 45.10 C
ATOM 10 O3' A A 425 52.889 111.433 23.760 1.00 48.93 O
ATOM 11 C2' A A 425 54.464 109.683 23.031 1.00 43.97 C
ATOM 12 O2' A A 425 53.425 108.762 23.291 1.00 45.01 O
ATOM 13 C1' A A 425 55.034 109.410 21.633 1.00 43.08 C
ATOM 14 N9 A A 425 56.483 109.589 21.507 1.00 39.12 N
ATOM 15 C8 A A 425 57.205 110.752 21.594 1.00 37.11 C
ATOM 16 N7 A A 425 58.499 110.581 21.458 1.00 36.86 N
ATOM 17 C5 A A 425 58.639 109.216 21.266 1.00 36.05 C
ATOM 18 C6 A A 425 59.764 108.400 21.083 1.00 37.36 C
ATOM 19 N6 A A 425 61.022 108.862 21.082 1.00 38.36 N
ATOM 20 N1 A A 425 59.559 107.074 20.910 1.00 35.81 N
ATOM 21 C2 A A 425 58.304 106.612 20.940 1.00 33.39 C
ATOM 22 N3 A A 425 57.169 107.276 21.124 1.00 35.83 N
ATOM 23 C4 A A 425 57.406 108.591 21.282 1.00 37.49 C
ATOM 24 P C A 426 53.095 112.589 24.853 1.00 49.76 P
ATOM 25 OP1 C A 426 51.800 112.846 25.531 1.00 49.80 O
ATOM 26 OP2 C A 426 53.816 113.714 24.202 1.00 50.84 O
ATOM 27 O5' C A 426 54.099 111.926 25.894 1.00 49.13 O
TER
ATOM 1 O3' A B 423 60.292 116.623 16.477 1.00 45.38 O
ATOM 2 P A B 424 59.580 116.477 17.902 1.00 44.46 P
ATOM 3 OP1 A B 424 58.774 117.697 18.151 1.00 45.75 O
ATOM 4 OP2 A B 424 60.627 116.073 18.872 1.00 45.44 O
ATOM 5 O5' A B 424 58.595 115.241 17.699 1.00 46.50 O
ATOM 6 C5' A B 424 57.402 115.353 16.899 1.00 44.24 C
ATOM 7 C4' A B 424 56.617 114.066 16.983 1.00 43.01 C
ATOM 8 O4' A B 424 57.412 112.995 16.418 1.00 41.00 O
ATOM 9 C3' A B 424 56.322 113.618 18.407 1.00 42.23 C
ATOM 10 O3' A B 424 55.122 114.241 18.852 1.00 43.11 O
ATOM 11 C2' A B 424 56.198 112.102 18.273 1.00 40.79 C
ATOM 12 O2' A B 424 54.923 111.690 17.819 1.00 39.64 O
ATOM 13 C1' A B 424 57.217 111.808 17.166 1.00 39.98 C
ATOM 14 N9 A B 424 58.532 111.306 17.569 1.00 38.17 N
ATOM 15 C8 A B 424 59.644 112.027 17.945 1.00 37.05 C
ATOM 16 N7 A B 424 60.710 111.287 18.147 1.00 35.56 N
ATOM 17 C5 A B 424 60.266 109.992 17.906 1.00 34.45 C
ATOM 18 C6 A B 424 60.923 108.748 17.926 1.00 34.32 C
ATOM 19 N6 A B 424 62.232 108.603 18.165 1.00 33.03 N
ATOM 20 N1 A B 424 60.184 107.641 17.673 1.00 34.98 N
ATOM 21 C2 A B 424 58.882 107.790 17.392 1.00 35.74 C
ATOM 22 N3 A B 424 58.158 108.910 17.312 1.00 37.15 N
ATOM 23 C4 A B 424 58.920 109.986 17.583 1.00 36.05 C
ATOM 24 P A B 425 54.931 114.597 20.406 1.00 48.67 P
ATOM 25 OP1 A B 425 53.678 115.402 20.507 1.00 47.26 O
ATOM 26 OP2 A B 425 56.210 115.134 20.972 1.00 46.96 O
ATOM 27 O5' A B 425 54.637 113.185 21.080 1.00 47.75 O
TER
ATOM 2 P A A 425 54.931 114.597 20.406 1.00 48.67 P
ATOM 3 OP1 A A 425 53.678 115.402 20.507 1.00 47.26 O
ATOM 4 OP2 A A 425 56.210 115.134 20.972 1.00 46.96 O
ATOM 5 O5' A A 425 54.637 113.185 21.080 1.00 47.75 O
ATOM 6 C5' A A 425 53.395 112.493 20.832 1.00 45.67 C
ATOM 7 C4' A A 425 53.444 111.119 21.444 1.00 44.79 C
ATOM 8 O4' A A 425 54.389 110.290 20.724 1.00 44.09 O
ATOM 9 C3' A A 425 53.951 111.108 22.872 1.00 45.10 C
ATOM 10 O3' A A 425 52.889 111.433 23.760 1.00 48.93 O
ATOM 11 C2' A A 425 54.464 109.683 23.031 1.00 43.97 C
ATOM 12 O2' A A 425 53.425 108.762 23.291 1.00 45.01 O
ATOM 13 C1' A A 425 55.034 109.410 21.633 1.00 43.08 C
ATOM 14 N9 A A 425 56.483 109.589 21.507 1.00 39.12 N
ATOM 15 C8 A A 425 57.205 110.752 21.594 1.00 37.11 C
ATOM 16 N7 A A 425 58.499 110.581 21.458 1.00 36.86 N
ATOM 17 C5 A A 425 58.639 109.216 21.266 1.00 36.05 C
ATOM 18 C6 A A 425 59.764 108.400 21.083 1.00 37.36 C
ATOM 19 N6 A A 425 61.022 108.862 21.082 1.00 38.36 N
ATOM 20 N1 A A 425 59.559 107.074 20.910 1.00 35.81 N
ATOM 21 C2 A A 425 58.304 106.612 20.940 1.00 33.39 C
ATOM 22 N3 A A 425 57.169 107.276 21.124 1.00 35.83 N
ATOM 23 C4 A A 425 57.406 108.591 21.282 1.00 37.49 C
ATOM 24 P C A 426 53.095 112.589 24.853 1.00 49.76 P
ATOM 25 OP1 C A 426 51.800 112.846 25.531 1.00 49.80 O
ATOM 26 OP2 C A 426 53.816 113.714 24.202 1.00 50.84 O
ATOM 27 O5' C A 426 54.099 111.926 25.894 1.00 49.13 O
TER
ATOM 1 O3' A B 423 60.292 116.623 16.477 1.00 45.38 O
ATOM 2 P A B 424 59.580 116.477 17.902 1.00 44.46 P
ATOM 3 OP1 A B 424 58.774 117.697 18.151 1.00 45.75 O
ATOM 4 OP2 A B 424 60.627 116.073 18.872 1.00 45.44 O
ATOM 5 O5' A B 424 58.595 115.241 17.699 1.00 46.50 O
ATOM 6 C5' A B 424 57.402 115.353 16.899 1.00 44.24 C
ATOM 7 C4' A B 424 56.617 114.066 16.983 1.00 43.01 C
ATOM 8 O4' A B 424 57.412 112.995 16.418 1.00 41.00 O
ATOM 9 C3' A B 424 56.322 113.618 18.407 1.00 42.23 C
ATOM 10 O3' A B 424 55.122 114.241 18.852 1.00 43.11 O
ATOM 11 C2' A B 424 56.198 112.102 18.273 1.00 40.79 C
ATOM 12 O2' A B 424 54.923 111.690 17.819 1.00 39.64 O
ATOM 13 C1' A B 424 57.217 111.808 17.166 1.00 39.98 C
ATOM 14 N9 A B 424 58.532 111.306 17.569 1.00 38.17 N
ATOM 15 C8 A B 424 59.644 112.027 17.945 1.00 37.05 C
ATOM 16 N7 A B 424 60.710 111.287 18.147 1.00 35.56 N
ATOM 17 C5 A B 424 60.266 109.992 17.906 1.00 34.45 C
ATOM 18 C6 A B 424 60.923 108.748 17.926 1.00 34.32 C
ATOM 19 N6 A B 424 62.232 108.603 18.165 1.00 33.03 N
ATOM 20 N1 A B 424 60.184 107.641 17.673 1.00 34.98 N
ATOM 21 C2 A B 424 58.882 107.790 17.392 1.00 35.74 C
ATOM 22 N3 A B 424 58.158 108.910 17.312 1.00 37.15 N
ATOM 23 C4 A B 424 58.920 109.986 17.583 1.00 36.05 C
ATOM 24 P A B 425 54.931 114.597 20.406 1.00 48.67 P
ATOM 25 OP1 A B 425 53.678 115.402 20.507 1.00 47.26 O
ATOM 26 OP2 A B 425 56.210 115.134 20.972 1.00 46.96 O
ATOM 27 O5' A B 425 54.637 113.185 21.080 1.00 47.75 O
TER
Atoms:
OP1: (53.678,115.402,20.507)
OP2: (56.210,115.134,20.972)
C3': (53.951,111.108,22.872)
C1': (55.034,109.410,21.633)
C5': (53.395,112.493,20.832)
O4': (54.389,110.290,20.724)
C8: (57.205,110.752,21.594)
O2': (53.425,108.762,23.291)
C6: (59.764,108.400,21.083)
C5: (58.639,109.216,21.266)
C4: (57.406,108.591,21.282)
P: (54.931,114.597,20.406)
C4': (53.444,111.119,21.444)
C2': (54.464,109.683,23.031)
C2: (58.304,106.612,20.940)
N1: (59.559,107.074,20.910)
N3: (57.169,107.276,21.124)
N6: (61.022,108.862,21.082)
N7: (58.499,110.581,21.458)
N9: (56.483,109.589,21.507)
O5': (54.637,113.185,21.080)
O3': (52.889,111.433,23.760)
OP2: (56.210,115.134,20.972)
C3': (53.951,111.108,22.872)
C1': (55.034,109.410,21.633)
C5': (53.395,112.493,20.832)
O4': (54.389,110.290,20.724)
C8: (57.205,110.752,21.594)
O2': (53.425,108.762,23.291)
C6: (59.764,108.400,21.083)
C5: (58.639,109.216,21.266)
C4: (57.406,108.591,21.282)
P: (54.931,114.597,20.406)
C4': (53.444,111.119,21.444)
C2': (54.464,109.683,23.031)
C2: (58.304,106.612,20.940)
N1: (59.559,107.074,20.910)
N3: (57.169,107.276,21.124)
N6: (61.022,108.862,21.082)
N7: (58.499,110.581,21.458)
N9: (56.483,109.589,21.507)
O5': (54.637,113.185,21.080)
O3': (52.889,111.433,23.760)
OP1: (58.774,117.697,18.151)
OP2: (60.627,116.073,18.872)
C3': (56.322,113.618,18.407)
C1': (57.217,111.808,17.166)
C5': (57.402,115.353,16.899)
O4': (57.412,112.995,16.418)
C8: (59.644,112.027,17.945)
O2': (54.923,111.690,17.819)
C6: (60.923,108.748,17.926)
C5: (60.266,109.992,17.906)
C4: (58.920,109.986,17.583)
P: (59.580,116.477,17.902)
C4': (56.617,114.066,16.983)
C2': (56.198,112.102,18.273)
C2: (58.882,107.790,17.392)
N1: (60.184,107.641,17.673)
N3: (58.158,108.910,17.312)
N6: (62.232,108.603,18.165)
N7: (60.710,111.287,18.147)
N9: (58.532,111.306,17.569)
O5': (58.595,115.241,17.699)
O3': (55.122,114.241,18.852)
OP2: (60.627,116.073,18.872)
C3': (56.322,113.618,18.407)
C1': (57.217,111.808,17.166)
C5': (57.402,115.353,16.899)
O4': (57.412,112.995,16.418)
C8: (59.644,112.027,17.945)
O2': (54.923,111.690,17.819)
C6: (60.923,108.748,17.926)
C5: (60.266,109.992,17.906)
C4: (58.920,109.986,17.583)
P: (59.580,116.477,17.902)
C4': (56.617,114.066,16.983)
C2': (56.198,112.102,18.273)
C2: (58.882,107.790,17.392)
N1: (60.184,107.641,17.673)
N3: (58.158,108.910,17.312)
N6: (62.232,108.603,18.165)
N7: (60.710,111.287,18.147)
N9: (58.532,111.306,17.569)
O5': (58.595,115.241,17.699)
O3': (55.122,114.241,18.852)
Image (generated by PyMOL):