Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YLS:B29:B28
Extra
PDB:
ATOM 1 O3' A A 28 32.683 29.371 10.585 1.00 24.49 O
ATOM 2 P A A 29 33.089 30.509 11.633 1.00 24.25 P
ATOM 3 OP1 A A 29 32.119 31.601 11.388 1.00 21.16 O
ATOM 4 OP2 A A 29 34.564 30.736 11.603 1.00 24.30 O
ATOM 5 O5' A A 29 32.835 29.825 13.062 1.00 22.14 O
ATOM 6 C5' A A 29 31.598 29.242 13.317 1.00 21.87 C
ATOM 7 C4' A A 29 31.716 28.280 14.454 1.00 21.24 C
ATOM 8 O4' A A 29 32.490 27.136 14.069 1.00 20.35 O
ATOM 9 C3' A A 29 32.451 28.798 15.661 1.00 22.09 C
ATOM 10 O3' A A 29 31.638 29.685 16.370 1.00 23.01 O
ATOM 11 C2' A A 29 32.717 27.484 16.383 1.00 21.57 C
ATOM 12 O2' A A 29 31.565 26.951 17.001 1.00 21.36 O
ATOM 13 C1' A A 29 33.186 26.642 15.203 1.00 21.04 C
ATOM 14 N9 A A 29 34.619 26.782 14.991 1.00 20.54 N
ATOM 15 C8 A A 29 35.259 27.754 14.299 1.00 20.90 C
ATOM 16 N7 A A 29 36.562 27.636 14.325 1.00 20.10 N
ATOM 17 C5 A A 29 36.785 26.528 15.073 1.00 18.82 C
ATOM 18 C6 A A 29 37.964 25.880 15.470 1.00 19.85 C
ATOM 19 N6 A A 29 39.172 26.291 15.126 1.00 21.05 N
ATOM 20 N1 A A 29 37.867 24.783 16.250 1.00 20.46 N
ATOM 21 C2 A A 29 36.641 24.366 16.596 1.00 22.45 C
ATOM 22 N3 A A 29 35.441 24.904 16.272 1.00 23.00 N
ATOM 23 C4 A A 29 35.598 25.995 15.504 1.00 20.56 C
ATOM 24 P U A 30 32.265 30.615 17.476 1.00 22.18 P
ATOM 25 OP1 U A 30 31.136 31.092 18.285 1.00 24.83 O
ATOM 26 OP2 U A 30 33.187 31.563 16.827 1.00 23.82 O
ATOM 27 O5' U A 30 33.134 29.643 18.359 1.00 20.14 O
TER
ATOM 1 O3' C B 27 37.349 28.557 6.846 1.00 27.92 O
ATOM 2 P A B 28 37.014 29.389 8.161 1.00 26.59 P
ATOM 3 OP1 A B 28 36.512 30.712 7.756 1.00 28.94 O
ATOM 4 OP2 A B 28 38.160 29.277 9.094 1.00 27.85 O
ATOM 5 O5' A B 28 35.805 28.568 8.751 1.00 26.22 O
ATOM 6 C5' A B 28 34.532 28.633 8.153 1.00 25.04 C
ATOM 7 C4' A B 28 33.592 27.806 8.987 1.00 25.30 C
ATOM 8 O4' A B 28 34.080 26.445 9.071 1.00 25.49 O
ATOM 9 C3' A B 28 33.540 28.239 10.429 1.00 26.02 C
ATOM 10 O3' A B 28 32.683 29.371 10.585 1.00 24.49 O
ATOM 11 C2' A B 28 33.051 26.977 11.124 1.00 26.04 C
ATOM 12 O2' A B 28 31.633 26.794 11.064 1.00 27.12 O
ATOM 13 C1' A B 28 33.800 25.910 10.345 1.00 24.07 C
ATOM 14 N9 A B 28 35.028 25.494 10.979 1.00 22.28 N
ATOM 15 C8 A B 28 36.308 25.865 10.707 1.00 22.39 C
ATOM 16 N7 A B 28 37.209 25.261 11.478 1.00 22.14 N
ATOM 17 C5 A B 28 36.454 24.467 12.306 1.00 22.65 C
ATOM 18 C6 A B 28 36.787 23.567 13.340 1.00 23.51 C
ATOM 19 N6 A B 28 38.032 23.330 13.749 1.00 23.84 N
ATOM 20 N1 A B 28 35.779 22.914 13.949 1.00 23.92 N
ATOM 21 C2 A B 28 34.527 23.155 13.550 1.00 23.98 C
ATOM 22 N3 A B 28 34.089 23.964 12.582 1.00 23.20 N
ATOM 23 C4 A B 28 35.111 24.599 12.003 1.00 23.15 C
ATOM 24 P A B 29 33.089 30.509 11.633 1.00 24.25 P
ATOM 25 OP1 A B 29 32.119 31.601 11.388 1.00 21.16 O
ATOM 26 OP2 A B 29 34.564 30.736 11.603 1.00 24.30 O
ATOM 27 O5' A B 29 32.835 29.825 13.062 1.00 22.14 O
TER
ATOM 2 P A A 29 33.089 30.509 11.633 1.00 24.25 P
ATOM 3 OP1 A A 29 32.119 31.601 11.388 1.00 21.16 O
ATOM 4 OP2 A A 29 34.564 30.736 11.603 1.00 24.30 O
ATOM 5 O5' A A 29 32.835 29.825 13.062 1.00 22.14 O
ATOM 6 C5' A A 29 31.598 29.242 13.317 1.00 21.87 C
ATOM 7 C4' A A 29 31.716 28.280 14.454 1.00 21.24 C
ATOM 8 O4' A A 29 32.490 27.136 14.069 1.00 20.35 O
ATOM 9 C3' A A 29 32.451 28.798 15.661 1.00 22.09 C
ATOM 10 O3' A A 29 31.638 29.685 16.370 1.00 23.01 O
ATOM 11 C2' A A 29 32.717 27.484 16.383 1.00 21.57 C
ATOM 12 O2' A A 29 31.565 26.951 17.001 1.00 21.36 O
ATOM 13 C1' A A 29 33.186 26.642 15.203 1.00 21.04 C
ATOM 14 N9 A A 29 34.619 26.782 14.991 1.00 20.54 N
ATOM 15 C8 A A 29 35.259 27.754 14.299 1.00 20.90 C
ATOM 16 N7 A A 29 36.562 27.636 14.325 1.00 20.10 N
ATOM 17 C5 A A 29 36.785 26.528 15.073 1.00 18.82 C
ATOM 18 C6 A A 29 37.964 25.880 15.470 1.00 19.85 C
ATOM 19 N6 A A 29 39.172 26.291 15.126 1.00 21.05 N
ATOM 20 N1 A A 29 37.867 24.783 16.250 1.00 20.46 N
ATOM 21 C2 A A 29 36.641 24.366 16.596 1.00 22.45 C
ATOM 22 N3 A A 29 35.441 24.904 16.272 1.00 23.00 N
ATOM 23 C4 A A 29 35.598 25.995 15.504 1.00 20.56 C
ATOM 24 P U A 30 32.265 30.615 17.476 1.00 22.18 P
ATOM 25 OP1 U A 30 31.136 31.092 18.285 1.00 24.83 O
ATOM 26 OP2 U A 30 33.187 31.563 16.827 1.00 23.82 O
ATOM 27 O5' U A 30 33.134 29.643 18.359 1.00 20.14 O
TER
ATOM 1 O3' C B 27 37.349 28.557 6.846 1.00 27.92 O
ATOM 2 P A B 28 37.014 29.389 8.161 1.00 26.59 P
ATOM 3 OP1 A B 28 36.512 30.712 7.756 1.00 28.94 O
ATOM 4 OP2 A B 28 38.160 29.277 9.094 1.00 27.85 O
ATOM 5 O5' A B 28 35.805 28.568 8.751 1.00 26.22 O
ATOM 6 C5' A B 28 34.532 28.633 8.153 1.00 25.04 C
ATOM 7 C4' A B 28 33.592 27.806 8.987 1.00 25.30 C
ATOM 8 O4' A B 28 34.080 26.445 9.071 1.00 25.49 O
ATOM 9 C3' A B 28 33.540 28.239 10.429 1.00 26.02 C
ATOM 10 O3' A B 28 32.683 29.371 10.585 1.00 24.49 O
ATOM 11 C2' A B 28 33.051 26.977 11.124 1.00 26.04 C
ATOM 12 O2' A B 28 31.633 26.794 11.064 1.00 27.12 O
ATOM 13 C1' A B 28 33.800 25.910 10.345 1.00 24.07 C
ATOM 14 N9 A B 28 35.028 25.494 10.979 1.00 22.28 N
ATOM 15 C8 A B 28 36.308 25.865 10.707 1.00 22.39 C
ATOM 16 N7 A B 28 37.209 25.261 11.478 1.00 22.14 N
ATOM 17 C5 A B 28 36.454 24.467 12.306 1.00 22.65 C
ATOM 18 C6 A B 28 36.787 23.567 13.340 1.00 23.51 C
ATOM 19 N6 A B 28 38.032 23.330 13.749 1.00 23.84 N
ATOM 20 N1 A B 28 35.779 22.914 13.949 1.00 23.92 N
ATOM 21 C2 A B 28 34.527 23.155 13.550 1.00 23.98 C
ATOM 22 N3 A B 28 34.089 23.964 12.582 1.00 23.20 N
ATOM 23 C4 A B 28 35.111 24.599 12.003 1.00 23.15 C
ATOM 24 P A B 29 33.089 30.509 11.633 1.00 24.25 P
ATOM 25 OP1 A B 29 32.119 31.601 11.388 1.00 21.16 O
ATOM 26 OP2 A B 29 34.564 30.736 11.603 1.00 24.30 O
ATOM 27 O5' A B 29 32.835 29.825 13.062 1.00 22.14 O
TER
Atoms:
OP1: (32.119,31.601,11.388)
OP2: (34.564,30.736,11.603)
C3': (32.451,28.798,15.661)
C1': (33.186,26.642,15.203)
C5': (31.598,29.242,13.317)
O4': (32.490,27.136,14.069)
C8: (35.259,27.754,14.299)
O2': (31.565,26.951,17.001)
C6: (37.964,25.880,15.470)
C5: (36.785,26.528,15.073)
C4: (35.598,25.995,15.504)
P: (33.089,30.509,11.633)
C4': (31.716,28.280,14.454)
C2': (32.717,27.484,16.383)
C2: (36.641,24.366,16.596)
N1: (37.867,24.783,16.250)
N3: (35.441,24.904,16.272)
N6: (39.172,26.291,15.126)
N7: (36.562,27.636,14.325)
N9: (34.619,26.782,14.991)
O5': (32.835,29.825,13.062)
O3': (31.638,29.685,16.370)
OP2: (34.564,30.736,11.603)
C3': (32.451,28.798,15.661)
C1': (33.186,26.642,15.203)
C5': (31.598,29.242,13.317)
O4': (32.490,27.136,14.069)
C8: (35.259,27.754,14.299)
O2': (31.565,26.951,17.001)
C6: (37.964,25.880,15.470)
C5: (36.785,26.528,15.073)
C4: (35.598,25.995,15.504)
P: (33.089,30.509,11.633)
C4': (31.716,28.280,14.454)
C2': (32.717,27.484,16.383)
C2: (36.641,24.366,16.596)
N1: (37.867,24.783,16.250)
N3: (35.441,24.904,16.272)
N6: (39.172,26.291,15.126)
N7: (36.562,27.636,14.325)
N9: (34.619,26.782,14.991)
O5': (32.835,29.825,13.062)
O3': (31.638,29.685,16.370)
OP1: (36.512,30.712,7.756)
OP2: (38.160,29.277,9.094)
C3': (33.540,28.239,10.429)
C1': (33.800,25.910,10.345)
C5': (34.532,28.633,8.153)
O4': (34.080,26.445,9.071)
C8: (36.308,25.865,10.707)
O2': (31.633,26.794,11.064)
C6: (36.787,23.567,13.340)
C5: (36.454,24.467,12.306)
C4: (35.111,24.599,12.003)
P: (37.014,29.389,8.161)
C4': (33.592,27.806,8.987)
C2': (33.051,26.977,11.124)
C2: (34.527,23.155,13.550)
N1: (35.779,22.914,13.949)
N3: (34.089,23.964,12.582)
N6: (38.032,23.330,13.749)
N7: (37.209,25.261,11.478)
N9: (35.028,25.494,10.979)
O5': (35.805,28.568,8.751)
O3': (32.683,29.371,10.585)
OP2: (38.160,29.277,9.094)
C3': (33.540,28.239,10.429)
C1': (33.800,25.910,10.345)
C5': (34.532,28.633,8.153)
O4': (34.080,26.445,9.071)
C8: (36.308,25.865,10.707)
O2': (31.633,26.794,11.064)
C6: (36.787,23.567,13.340)
C5: (36.454,24.467,12.306)
C4: (35.111,24.599,12.003)
P: (37.014,29.389,8.161)
C4': (33.592,27.806,8.987)
C2': (33.051,26.977,11.124)
C2: (34.527,23.155,13.550)
N1: (35.779,22.914,13.949)
N3: (34.089,23.964,12.582)
N6: (38.032,23.330,13.749)
N7: (37.209,25.261,11.478)
N9: (35.028,25.494,10.979)
O5': (35.805,28.568,8.751)
O3': (32.683,29.371,10.585)
Image (generated by PyMOL):