Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:A21:A20
Extra
PDB:
ATOM 1 O3' A A 20 19.524 -48.698 13.291 1.00 65.59 O
ATOM 2 P A A 21 18.878 -50.151 13.112 1.00 67.44 P
ATOM 3 OP1 A A 21 17.486 -50.047 13.623 1.00 67.22 O
ATOM 4 OP2 A A 21 19.808 -51.155 13.692 1.00 67.87 O
ATOM 5 O5' A A 21 18.894 -50.361 11.519 1.00 66.56 O
ATOM 6 C5' A A 21 18.066 -49.578 10.666 1.00 65.47 C
ATOM 7 C4' A A 21 18.354 -49.898 9.214 1.00 66.53 C
ATOM 8 O4' A A 21 19.757 -49.675 8.935 1.00 66.81 O
ATOM 9 C3' A A 21 18.166 -51.353 8.826 1.00 68.29 C
ATOM 10 O3' A A 21 16.812 -51.655 8.563 1.00 69.03 O
ATOM 11 C2' A A 21 19.045 -51.487 7.586 1.00 68.81 C
ATOM 12 O2' A A 21 18.476 -50.954 6.406 1.00 68.84 O
ATOM 13 C1' A A 21 20.243 -50.662 8.033 1.00 67.73 C
ATOM 14 N9 A A 21 21.275 -51.459 8.697 1.00 67.85 N
ATOM 15 C8 A A 21 21.623 -51.416 10.019 1.00 67.57 C
ATOM 16 N7 A A 21 22.588 -52.238 10.346 1.00 68.23 N
ATOM 17 C5 A A 21 22.895 -52.873 9.158 1.00 69.00 C
ATOM 18 C6 A A 21 23.841 -53.866 8.833 1.00 70.20 C
ATOM 19 N6 A A 21 24.678 -54.403 9.728 1.00 70.62 N
ATOM 20 N1 A A 21 23.896 -54.287 7.549 1.00 71.35 N
ATOM 21 C2 A A 21 23.056 -53.748 6.653 1.00 71.12 C
ATOM 22 N3 A A 21 22.128 -52.807 6.843 1.00 69.96 N
ATOM 23 C4 A A 21 22.097 -52.407 8.129 1.00 68.85 C
ATOM 24 P U A 22 16.236 -53.040 9.114 1.00 70.34 P
ATOM 25 OP1 U A 22 14.783 -53.073 8.814 1.00 70.98 O
ATOM 26 OP2 U A 22 16.677 -53.205 10.518 1.00 70.20 O
ATOM 27 O5' U A 22 17.014 -54.121 8.221 1.00 71.41 O
TER
ATOM 1 O3' U B 19 24.911 -49.557 16.372 1.00 65.88 O
ATOM 2 P A B 20 23.682 -50.506 15.984 1.00 65.59 P
ATOM 3 OP1 A B 20 22.844 -50.622 17.200 1.00 66.13 O
ATOM 4 OP2 A B 20 24.209 -51.728 15.334 1.00 66.90 O
ATOM 5 O5' A B 20 22.900 -49.664 14.879 1.00 64.14 O
ATOM 6 C5' A B 20 22.000 -48.646 15.282 1.00 63.56 C
ATOM 7 C4' A B 20 21.609 -47.789 14.095 1.00 63.34 C
ATOM 8 O4' A B 20 22.793 -47.275 13.436 1.00 62.98 O
ATOM 9 C3' A B 20 20.898 -48.535 12.983 1.00 64.45 C
ATOM 10 O3' A B 20 19.524 -48.698 13.291 1.00 65.59 O
ATOM 11 C2' A B 20 21.153 -47.630 11.784 1.00 63.10 C
ATOM 12 O2' A B 20 20.387 -46.443 11.789 1.00 62.38 O
ATOM 13 C1' A B 20 22.621 -47.311 12.026 1.00 62.22 C
ATOM 14 N9 A B 20 23.546 -48.291 11.451 1.00 61.98 N
ATOM 15 C8 A B 20 24.492 -49.021 12.118 1.00 62.33 C
ATOM 16 N7 A B 20 25.187 -49.828 11.353 1.00 62.61 N
ATOM 17 C5 A B 20 24.661 -49.616 10.095 1.00 62.13 C
ATOM 18 C6 A B 20 24.966 -50.172 8.839 1.00 62.57 C
ATOM 19 N6 A B 20 25.919 -51.088 8.655 1.00 63.08 N
ATOM 20 N1 A B 20 24.251 -49.746 7.775 1.00 62.82 N
ATOM 21 C2 A B 20 23.292 -48.824 7.957 1.00 61.93 C
ATOM 22 N3 A B 20 22.920 -48.227 9.088 1.00 61.16 N
ATOM 23 C4 A B 20 23.649 -48.671 10.131 1.00 61.74 C
ATOM 24 P A B 21 18.878 -50.151 13.112 1.00 67.44 P
ATOM 25 OP1 A B 21 17.486 -50.047 13.623 1.00 67.22 O
ATOM 26 OP2 A B 21 19.808 -51.155 13.692 1.00 67.87 O
ATOM 27 O5' A B 21 18.894 -50.361 11.519 1.00 66.56 O
TER
ATOM 2 P A A 21 18.878 -50.151 13.112 1.00 67.44 P
ATOM 3 OP1 A A 21 17.486 -50.047 13.623 1.00 67.22 O
ATOM 4 OP2 A A 21 19.808 -51.155 13.692 1.00 67.87 O
ATOM 5 O5' A A 21 18.894 -50.361 11.519 1.00 66.56 O
ATOM 6 C5' A A 21 18.066 -49.578 10.666 1.00 65.47 C
ATOM 7 C4' A A 21 18.354 -49.898 9.214 1.00 66.53 C
ATOM 8 O4' A A 21 19.757 -49.675 8.935 1.00 66.81 O
ATOM 9 C3' A A 21 18.166 -51.353 8.826 1.00 68.29 C
ATOM 10 O3' A A 21 16.812 -51.655 8.563 1.00 69.03 O
ATOM 11 C2' A A 21 19.045 -51.487 7.586 1.00 68.81 C
ATOM 12 O2' A A 21 18.476 -50.954 6.406 1.00 68.84 O
ATOM 13 C1' A A 21 20.243 -50.662 8.033 1.00 67.73 C
ATOM 14 N9 A A 21 21.275 -51.459 8.697 1.00 67.85 N
ATOM 15 C8 A A 21 21.623 -51.416 10.019 1.00 67.57 C
ATOM 16 N7 A A 21 22.588 -52.238 10.346 1.00 68.23 N
ATOM 17 C5 A A 21 22.895 -52.873 9.158 1.00 69.00 C
ATOM 18 C6 A A 21 23.841 -53.866 8.833 1.00 70.20 C
ATOM 19 N6 A A 21 24.678 -54.403 9.728 1.00 70.62 N
ATOM 20 N1 A A 21 23.896 -54.287 7.549 1.00 71.35 N
ATOM 21 C2 A A 21 23.056 -53.748 6.653 1.00 71.12 C
ATOM 22 N3 A A 21 22.128 -52.807 6.843 1.00 69.96 N
ATOM 23 C4 A A 21 22.097 -52.407 8.129 1.00 68.85 C
ATOM 24 P U A 22 16.236 -53.040 9.114 1.00 70.34 P
ATOM 25 OP1 U A 22 14.783 -53.073 8.814 1.00 70.98 O
ATOM 26 OP2 U A 22 16.677 -53.205 10.518 1.00 70.20 O
ATOM 27 O5' U A 22 17.014 -54.121 8.221 1.00 71.41 O
TER
ATOM 1 O3' U B 19 24.911 -49.557 16.372 1.00 65.88 O
ATOM 2 P A B 20 23.682 -50.506 15.984 1.00 65.59 P
ATOM 3 OP1 A B 20 22.844 -50.622 17.200 1.00 66.13 O
ATOM 4 OP2 A B 20 24.209 -51.728 15.334 1.00 66.90 O
ATOM 5 O5' A B 20 22.900 -49.664 14.879 1.00 64.14 O
ATOM 6 C5' A B 20 22.000 -48.646 15.282 1.00 63.56 C
ATOM 7 C4' A B 20 21.609 -47.789 14.095 1.00 63.34 C
ATOM 8 O4' A B 20 22.793 -47.275 13.436 1.00 62.98 O
ATOM 9 C3' A B 20 20.898 -48.535 12.983 1.00 64.45 C
ATOM 10 O3' A B 20 19.524 -48.698 13.291 1.00 65.59 O
ATOM 11 C2' A B 20 21.153 -47.630 11.784 1.00 63.10 C
ATOM 12 O2' A B 20 20.387 -46.443 11.789 1.00 62.38 O
ATOM 13 C1' A B 20 22.621 -47.311 12.026 1.00 62.22 C
ATOM 14 N9 A B 20 23.546 -48.291 11.451 1.00 61.98 N
ATOM 15 C8 A B 20 24.492 -49.021 12.118 1.00 62.33 C
ATOM 16 N7 A B 20 25.187 -49.828 11.353 1.00 62.61 N
ATOM 17 C5 A B 20 24.661 -49.616 10.095 1.00 62.13 C
ATOM 18 C6 A B 20 24.966 -50.172 8.839 1.00 62.57 C
ATOM 19 N6 A B 20 25.919 -51.088 8.655 1.00 63.08 N
ATOM 20 N1 A B 20 24.251 -49.746 7.775 1.00 62.82 N
ATOM 21 C2 A B 20 23.292 -48.824 7.957 1.00 61.93 C
ATOM 22 N3 A B 20 22.920 -48.227 9.088 1.00 61.16 N
ATOM 23 C4 A B 20 23.649 -48.671 10.131 1.00 61.74 C
ATOM 24 P A B 21 18.878 -50.151 13.112 1.00 67.44 P
ATOM 25 OP1 A B 21 17.486 -50.047 13.623 1.00 67.22 O
ATOM 26 OP2 A B 21 19.808 -51.155 13.692 1.00 67.87 O
ATOM 27 O5' A B 21 18.894 -50.361 11.519 1.00 66.56 O
TER
Atoms:
OP1: (17.486,-50.047,13.623)
OP2: (19.808,-51.155,13.692)
C3': (18.166,-51.353,8.826)
C1': (20.243,-50.662,8.033)
C5': (18.066,-49.578,10.666)
O4': (19.757,-49.675,8.935)
C8: (21.623,-51.416,10.019)
O2': (18.476,-50.954,6.406)
C6: (23.841,-53.866,8.833)
C5: (22.895,-52.873,9.158)
C4: (22.097,-52.407,8.129)
P: (18.878,-50.151,13.112)
C4': (18.354,-49.898,9.214)
C2': (19.045,-51.487,7.586)
C2: (23.056,-53.748,6.653)
N1: (23.896,-54.287,7.549)
N3: (22.128,-52.807,6.843)
N6: (24.678,-54.403,9.728)
N7: (22.588,-52.238,10.346)
N9: (21.275,-51.459,8.697)
O5': (18.894,-50.361,11.519)
O3': (16.812,-51.655,8.563)
OP2: (19.808,-51.155,13.692)
C3': (18.166,-51.353,8.826)
C1': (20.243,-50.662,8.033)
C5': (18.066,-49.578,10.666)
O4': (19.757,-49.675,8.935)
C8: (21.623,-51.416,10.019)
O2': (18.476,-50.954,6.406)
C6: (23.841,-53.866,8.833)
C5: (22.895,-52.873,9.158)
C4: (22.097,-52.407,8.129)
P: (18.878,-50.151,13.112)
C4': (18.354,-49.898,9.214)
C2': (19.045,-51.487,7.586)
C2: (23.056,-53.748,6.653)
N1: (23.896,-54.287,7.549)
N3: (22.128,-52.807,6.843)
N6: (24.678,-54.403,9.728)
N7: (22.588,-52.238,10.346)
N9: (21.275,-51.459,8.697)
O5': (18.894,-50.361,11.519)
O3': (16.812,-51.655,8.563)
OP1: (22.844,-50.622,17.200)
OP2: (24.209,-51.728,15.334)
C3': (20.898,-48.535,12.983)
C1': (22.621,-47.311,12.026)
C5': (22.000,-48.646,15.282)
O4': (22.793,-47.275,13.436)
C8: (24.492,-49.021,12.118)
O2': (20.387,-46.443,11.789)
C6: (24.966,-50.172,8.839)
C5: (24.661,-49.616,10.095)
C4: (23.649,-48.671,10.131)
P: (23.682,-50.506,15.984)
C4': (21.609,-47.789,14.095)
C2': (21.153,-47.630,11.784)
C2: (23.292,-48.824,7.957)
N1: (24.251,-49.746,7.775)
N3: (22.920,-48.227,9.088)
N6: (25.919,-51.088,8.655)
N7: (25.187,-49.828,11.353)
N9: (23.546,-48.291,11.451)
O5': (22.900,-49.664,14.879)
O3': (19.524,-48.698,13.291)
OP2: (24.209,-51.728,15.334)
C3': (20.898,-48.535,12.983)
C1': (22.621,-47.311,12.026)
C5': (22.000,-48.646,15.282)
O4': (22.793,-47.275,13.436)
C8: (24.492,-49.021,12.118)
O2': (20.387,-46.443,11.789)
C6: (24.966,-50.172,8.839)
C5: (24.661,-49.616,10.095)
C4: (23.649,-48.671,10.131)
P: (23.682,-50.506,15.984)
C4': (21.609,-47.789,14.095)
C2': (21.153,-47.630,11.784)
C2: (23.292,-48.824,7.957)
N1: (24.251,-49.746,7.775)
N3: (22.920,-48.227,9.088)
N6: (25.919,-51.088,8.655)
N7: (25.187,-49.828,11.353)
N9: (23.546,-48.291,11.451)
O5': (22.900,-49.664,14.879)
O3': (19.524,-48.698,13.291)
Image (generated by PyMOL):