ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1JJ2:0424:0423

Extra

PDB:
ATOM 1 O3' A A 423 60.634 117.314 16.433 1.00 37.01 O
ATOM 2 P A A 424 59.832 117.188 17.815 1.00 37.97 P
ATOM 3 OP1 A A 424 59.013 118.416 17.937 1.00 39.42 O
ATOM 4 OP2 A A 424 60.774 116.826 18.899 1.00 40.50 O
ATOM 5 O5' A A 424 58.879 115.933 17.586 1.00 40.69 O
ATOM 6 C5' A A 424 57.710 116.010 16.748 1.00 36.73 C
ATOM 7 C4' A A 424 56.889 114.757 16.913 1.00 37.04 C
ATOM 8 O4' A A 424 57.598 113.633 16.340 1.00 35.60 O
ATOM 9 C3' A A 424 56.639 114.361 18.362 1.00 36.65 C
ATOM 10 O3' A A 424 55.493 115.049 18.845 1.00 39.88 O
ATOM 11 C2' A A 424 56.428 112.857 18.266 1.00 33.98 C
ATOM 12 O2' A A 424 55.119 112.553 17.838 1.00 31.52 O
ATOM 13 C1' A A 424 57.410 112.484 17.150 1.00 33.70 C
ATOM 14 N9 A A 424 58.738 112.034 17.565 1.00 33.43 N
ATOM 15 C8 A A 424 59.814 112.819 17.907 1.00 31.28 C
ATOM 16 N7 A A 424 60.911 112.140 18.127 1.00 32.22 N
ATOM 17 C5 A A 424 60.529 110.817 17.941 1.00 31.54 C
ATOM 18 C6 A A 424 61.243 109.606 18.013 1.00 31.53 C
ATOM 19 N6 A A 424 62.549 109.529 18.272 1.00 31.64 N
ATOM 20 N1 A A 424 60.562 108.463 17.795 1.00 31.13 N
ATOM 21 C2 A A 424 59.257 108.542 17.511 1.00 31.18 C
ATOM 22 N3 A A 424 58.481 109.617 17.400 1.00 31.31 N
ATOM 23 C4 A A 424 59.186 110.737 17.627 1.00 31.54 C
ATOM 24 P A A 425 55.310 115.297 20.416 1.00 44.28 P
ATOM 25 OP1 A A 425 54.085 116.122 20.576 1.00 44.31 O
ATOM 26 OP2 A A 425 56.594 115.758 21.014 1.00 43.68 O
ATOM 27 O5' A A 425 54.991 113.844 20.984 1.00 45.45 O
TER

ATOM 1 O3' U B 422 66.548 115.656 15.822 1.00 32.48 O
ATOM 2 P A B 423 65.523 115.363 17.020 1.00 32.53 P
ATOM 3 OP1 A B 423 65.712 116.387 18.063 1.00 33.59 O
ATOM 4 OP2 A B 423 65.652 113.927 17.370 1.00 34.36 O
ATOM 5 O5' A B 423 64.084 115.600 16.389 1.00 31.51 O
ATOM 6 C5' A B 423 63.745 116.825 15.710 1.00 31.32 C
ATOM 7 C4' A B 423 62.437 116.642 14.985 1.00 32.01 C
ATOM 8 O4' A B 423 62.597 115.573 14.020 1.00 32.87 O
ATOM 9 C3' A B 423 61.312 116.183 15.898 1.00 34.28 C
ATOM 10 O3' A B 423 60.634 117.314 16.433 1.00 37.01 O
ATOM 11 C2' A B 423 60.430 115.353 14.976 1.00 34.19 C
ATOM 12 O2' A B 423 59.555 116.139 14.198 1.00 37.26 O
ATOM 13 C1' A B 423 61.468 114.716 14.054 1.00 32.96 C
ATOM 14 N9 A B 423 61.925 113.387 14.457 1.00 34.69 N
ATOM 15 C8 A B 423 63.133 113.060 15.029 1.00 34.31 C
ATOM 16 N7 A B 423 63.298 111.777 15.221 1.00 33.60 N
ATOM 17 C5 A B 423 62.116 111.217 14.762 1.00 34.17 C
ATOM 18 C6 A B 423 61.676 109.890 14.677 1.00 34.06 C
ATOM 19 N6 A B 423 62.406 108.842 15.060 1.00 34.02 N
ATOM 20 N1 A B 423 60.448 109.671 14.172 1.00 36.96 N
ATOM 21 C2 A B 423 59.719 110.725 13.776 1.00 37.71 C
ATOM 22 N3 A B 423 60.026 112.018 13.798 1.00 35.37 N
ATOM 23 C4 A B 423 61.253 112.199 14.306 1.00 34.36 C
ATOM 24 P A B 424 59.832 117.188 17.815 1.00 37.97 P
ATOM 25 OP1 A B 424 59.013 118.416 17.937 1.00 39.42 O
ATOM 26 OP2 A B 424 60.774 116.826 18.899 1.00 40.50 O
ATOM 27 O5' A B 424 58.879 115.933 17.586 1.00 40.69 O
TER

Atoms:
OP1: (59.013,118.416,17.937)
OP2: (60.774,116.826,18.899)
C3': (56.639,114.361,18.362)
C1': (57.410,112.484,17.150)
C5': (57.710,116.010,16.748)
O4': (57.598,113.633,16.340)
C8: (59.814,112.819,17.907)
O2': (55.119,112.553,17.838)
C6: (61.243,109.606,18.013)
C5: (60.529,110.817,17.941)
C4: (59.186,110.737,17.627)
P: (59.832,117.188,17.815)
C4': (56.889,114.757,16.913)
C2': (56.428,112.857,18.266)
C2: (59.257,108.542,17.511)
N1: (60.562,108.463,17.795)
N3: (58.481,109.617,17.400)
N6: (62.549,109.529,18.272)
N7: (60.911,112.140,18.127)
N9: (58.738,112.034,17.565)
O5': (58.879,115.933,17.586)
O3': (55.493,115.049,18.845)
OP1: (65.712,116.387,18.063)
OP2: (65.652,113.927,17.370)
C3': (61.312,116.183,15.898)
C1': (61.468,114.716,14.054)
C5': (63.745,116.825,15.710)
O4': (62.597,115.573,14.020)
C8: (63.133,113.060,15.029)
O2': (59.555,116.139,14.198)
C6: (61.676,109.890,14.677)
C5: (62.116,111.217,14.762)
C4: (61.253,112.199,14.306)
P: (65.523,115.363,17.020)
C4': (62.437,116.642,14.985)
C2': (60.430,115.353,14.976)
C2: (59.719,110.725,13.776)
N1: (60.448,109.671,14.172)
N3: (60.026,112.018,13.798)
N6: (62.406,108.842,15.060)
N7: (63.298,111.777,15.221)
N9: (61.925,113.387,14.457)
O5': (64.084,115.600,16.389)
O3': (60.634,117.314,16.433)
Image (generated by PyMOL):
PyMOL image
show in jmol