ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A973:A972

Extra

PDB:
ATOM 1 O3' A A 972 43.747 63.171 109.055 1.00 42.41 O
ATOM 2 P A A 973 42.992 63.454 107.674 1.00 44.49 P
ATOM 3 OP1 A A 973 41.888 62.474 107.662 1.00 42.77 O
ATOM 4 OP2 A A 973 43.958 63.467 106.553 1.00 44.44 O
ATOM 5 O5' A A 973 42.423 64.933 107.866 1.00 43.12 O
ATOM 6 C5' A A 973 41.559 65.242 108.980 1.00 42.59 C
ATOM 7 C4' A A 973 41.615 66.715 109.334 1.00 42.78 C
ATOM 8 O4' A A 973 42.912 67.059 109.881 1.00 43.98 O
ATOM 9 C3' A A 973 41.396 67.719 108.214 1.00 42.79 C
ATOM 10 O3' A A 973 40.012 67.932 107.991 1.00 45.27 O
ATOM 11 C2' A A 973 42.008 68.971 108.825 1.00 43.60 C
ATOM 12 O2' A A 973 41.176 69.559 109.807 1.00 41.28 O
ATOM 13 C1' A A 973 43.247 68.381 109.495 1.00 43.65 C
ATOM 14 N9 A A 973 44.325 68.315 108.509 1.00 42.96 N
ATOM 15 C8 A A 973 44.799 67.239 107.804 1.00 44.22 C
ATOM 16 N7 A A 973 45.746 67.540 106.955 1.00 43.39 N
ATOM 17 C5 A A 973 45.918 68.901 107.122 1.00 43.04 C
ATOM 18 C6 A A 973 46.784 69.827 106.505 1.00 43.11 C
ATOM 19 N6 A A 973 47.667 69.495 105.559 1.00 42.46 N
ATOM 20 N1 A A 973 46.705 71.118 106.895 1.00 42.31 N
ATOM 21 C2 A A 973 45.806 71.438 107.834 1.00 43.03 C
ATOM 22 N3 A A 973 44.940 70.657 108.481 1.00 42.95 N
ATOM 23 C4 A A 973 45.053 69.388 108.076 1.00 42.48 C
ATOM 24 P C A 974 39.418 68.051 106.494 1.00 46.90 P
ATOM 25 OP1 C A 974 38.320 69.034 106.604 1.00 43.79 O
ATOM 26 OP2 C A 974 39.146 66.698 105.923 1.00 45.40 O
ATOM 27 O5' C A 974 40.556 68.753 105.639 1.00 44.32 O
TER

ATOM 1 O3' A B 971 48.097 59.792 110.149 1.00 41.63 O
ATOM 2 P A B 972 47.836 59.969 108.578 1.00 40.78 P
ATOM 3 OP1 A B 972 46.464 59.483 108.300 1.00 41.47 O
ATOM 4 OP2 A B 972 48.981 59.444 107.794 1.00 38.94 O
ATOM 5 O5' A B 972 47.833 61.545 108.404 1.00 41.40 O
ATOM 6 C5' A B 972 46.619 62.250 108.150 1.00 39.75 C
ATOM 7 C4' A B 972 46.033 62.713 109.439 1.00 40.35 C
ATOM 8 O4' A B 972 47.070 63.329 110.227 1.00 41.73 O
ATOM 9 C3' A B 972 44.977 63.781 109.311 1.00 40.85 C
ATOM 10 O3' A B 972 43.747 63.171 109.055 1.00 42.41 O
ATOM 11 C2' A B 972 45.028 64.425 110.682 1.00 42.21 C
ATOM 12 O2' A B 972 44.418 63.599 111.652 1.00 41.77 O
ATOM 13 C1' A B 972 46.541 64.449 110.917 1.00 42.44 C
ATOM 14 N9 A B 972 47.151 65.649 110.341 1.00 42.41 N
ATOM 15 C8 A B 972 48.151 65.723 109.400 1.00 40.78 C
ATOM 16 N7 A B 972 48.484 66.946 109.080 1.00 40.04 N
ATOM 17 C5 A B 972 47.657 67.733 109.866 1.00 40.48 C
ATOM 18 C6 A B 972 47.542 69.115 110.006 1.00 40.44 C
ATOM 19 N6 A B 972 48.286 69.984 109.323 1.00 40.00 N
ATOM 20 N1 A B 972 46.626 69.585 110.881 1.00 41.05 N
ATOM 21 C2 A B 972 45.876 68.708 111.559 1.00 41.19 C
ATOM 22 N3 A B 972 45.892 67.383 111.514 1.00 42.42 N
ATOM 23 C4 A B 972 46.823 66.951 110.639 1.00 41.97 C
ATOM 24 P A B 973 42.992 63.454 107.674 1.00 44.49 P
ATOM 25 OP1 A B 973 41.888 62.474 107.662 1.00 42.77 O
ATOM 26 OP2 A B 973 43.958 63.467 106.553 1.00 44.44 O
ATOM 27 O5' A B 973 42.423 64.933 107.866 1.00 43.12 O
TER

Atoms:
OP1: (41.888,62.474,107.662)
OP2: (43.958,63.467,106.553)
C3': (41.396,67.719,108.214)
C1': (43.247,68.381,109.495)
C5': (41.559,65.242,108.980)
O4': (42.912,67.059,109.881)
C8: (44.799,67.239,107.804)
O2': (41.176,69.559,109.807)
C6: (46.784,69.827,106.505)
C5: (45.918,68.901,107.122)
C4: (45.053,69.388,108.076)
P: (42.992,63.454,107.674)
C4': (41.615,66.715,109.334)
C2': (42.008,68.971,108.825)
C2: (45.806,71.438,107.834)
N1: (46.705,71.118,106.895)
N3: (44.940,70.657,108.481)
N6: (47.667,69.495,105.559)
N7: (45.746,67.540,106.955)
N9: (44.325,68.315,108.509)
O5': (42.423,64.933,107.866)
O3': (40.012,67.932,107.991)
OP1: (46.464,59.483,108.300)
OP2: (48.981,59.444,107.794)
C3': (44.977,63.781,109.311)
C1': (46.541,64.449,110.917)
C5': (46.619,62.250,108.150)
O4': (47.070,63.329,110.227)
C8: (48.151,65.723,109.400)
O2': (44.418,63.599,111.652)
C6: (47.542,69.115,110.006)
C5: (47.657,67.733,109.866)
C4: (46.823,66.951,110.639)
P: (47.836,59.969,108.578)
C4': (46.033,62.713,109.439)
C2': (45.028,64.425,110.682)
C2: (45.876,68.708,111.559)
N1: (46.626,69.585,110.881)
N3: (45.892,67.383,111.514)
N6: (48.286,69.984,109.323)
N7: (48.484,66.946,109.080)
N9: (47.151,65.649,110.341)
O5': (47.833,61.545,108.404)
O3': (43.747,63.171,109.055)
Image (generated by PyMOL):
PyMOL image
show in jmol