ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3BNR:D15:D14

Extra

PDB:
ATOM 1 O3' A A 14 -10.892 -13.865 7.639 1.00 40.46 O
ATOM 2 P A A 15 -11.511 -15.262 8.134 1.00 43.14 P
ATOM 3 OP1 A A 15 -11.006 -16.314 7.222 1.00 44.65 O
ATOM 4 OP2 A A 15 -12.972 -15.103 8.330 1.00 40.88 O
ATOM 5 O5' A A 15 -10.858 -15.488 9.568 1.00 42.40 O
ATOM 6 C5' A A 15 -9.459 -15.686 9.717 1.00 40.60 C
ATOM 7 C4' A A 15 -9.088 -15.679 11.180 1.00 39.20 C
ATOM 8 O4' A A 15 -9.283 -14.346 11.734 1.00 37.55 O
ATOM 9 C3' A A 15 -9.904 -16.584 12.094 1.00 38.62 C
ATOM 10 O3' A A 15 -9.384 -17.908 12.108 1.00 41.60 O
ATOM 11 C2' A A 15 -9.666 -15.924 13.441 1.00 36.83 C
ATOM 12 O2' A A 15 -8.362 -16.182 13.922 1.00 39.17 O
ATOM 13 C1' A A 15 -9.784 -14.451 13.060 1.00 34.32 C
ATOM 14 N9 A A 15 -11.173 -13.996 13.071 1.00 32.55 N
ATOM 15 C8 A A 15 -12.018 -13.807 12.004 1.00 28.43 C
ATOM 16 N7 A A 15 -13.217 -13.401 12.346 1.00 29.04 N
ATOM 17 C5 A A 15 -13.157 -13.312 13.732 1.00 27.37 C
ATOM 18 C6 A A 15 -14.107 -12.929 14.702 1.00 29.41 C
ATOM 19 N6 A A 15 -15.346 -12.526 14.410 1.00 28.21 N
ATOM 20 N1 A A 15 -13.730 -12.964 15.999 1.00 27.60 N
ATOM 21 C2 A A 15 -12.474 -13.339 16.291 1.00 28.84 C
ATOM 22 N3 A A 15 -11.489 -13.703 15.469 1.00 27.02 N
ATOM 23 C4 A A 15 -11.903 -13.673 14.191 1.00 29.76 C
ATOM 24 P G A 16 -10.385 -19.160 12.242 1.00 45.53 P
ATOM 25 OP1 G A 16 -9.507 -20.347 12.399 1.00 45.81 O
ATOM 26 OP2 G A 16 -11.375 -19.115 11.131 1.00 46.25 O
ATOM 27 O5' G A 16 -11.183 -18.915 13.600 1.00 43.94 O
TER

ATOM 1 O3' C B 13 -15.376 -9.853 8.684 1.00 35.85 O
ATOM 2 P A B 14 -15.212 -11.106 7.694 1.00 37.83 P
ATOM 3 OP1 A B 14 -15.363 -10.591 6.308 1.00 39.54 O
ATOM 4 OP2 A B 14 -16.072 -12.206 8.168 1.00 36.98 O
ATOM 5 O5' A B 14 -13.697 -11.547 7.881 1.00 38.02 O
ATOM 6 C5' A B 14 -12.746 -11.364 6.843 1.00 37.45 C
ATOM 7 C4' A B 14 -11.360 -11.495 7.408 1.00 38.56 C
ATOM 8 O4' A B 14 -11.073 -10.330 8.230 1.00 37.75 O
ATOM 9 C3' A B 14 -11.202 -12.675 8.350 1.00 38.87 C
ATOM 10 O3' A B 14 -10.892 -13.865 7.639 1.00 40.46 O
ATOM 11 C2' A B 14 -10.075 -12.212 9.261 1.00 37.85 C
ATOM 12 O2' A B 14 -8.804 -12.353 8.669 1.00 38.47 O
ATOM 13 C1' A B 14 -10.407 -10.728 9.416 1.00 36.24 C
ATOM 14 N9 A B 14 -11.287 -10.436 10.546 1.00 33.36 N
ATOM 15 C8 A B 14 -12.603 -10.049 10.493 1.00 32.39 C
ATOM 16 N7 A B 14 -13.144 -9.859 11.667 1.00 31.59 N
ATOM 17 C5 A B 14 -12.117 -10.143 12.558 1.00 29.36 C
ATOM 18 C6 A B 14 -12.056 -10.135 13.962 1.00 27.40 C
ATOM 19 N6 A B 14 -13.092 -9.831 14.745 1.00 23.39 N
ATOM 20 N1 A B 14 -10.878 -10.460 14.540 1.00 28.48 N
ATOM 21 C2 A B 14 -9.845 -10.778 13.752 1.00 28.29 C
ATOM 22 N3 A B 14 -9.783 -10.827 12.424 1.00 31.61 N
ATOM 23 C4 A B 14 -10.967 -10.494 11.881 1.00 30.41 C
ATOM 24 P A B 15 -11.511 -15.262 8.134 1.00 43.14 P
ATOM 25 OP1 A B 15 -11.006 -16.314 7.222 1.00 44.65 O
ATOM 26 OP2 A B 15 -12.972 -15.103 8.330 1.00 40.88 O
ATOM 27 O5' A B 15 -10.858 -15.488 9.568 1.00 42.40 O
TER

Atoms:
OP1: (-11.006,-16.314,7.222)
OP2: (-12.972,-15.103,8.330)
C3': (-9.904,-16.584,12.094)
C1': (-9.784,-14.451,13.060)
C5': (-9.459,-15.686,9.717)
O4': (-9.283,-14.346,11.734)
C8: (-12.018,-13.807,12.004)
O2': (-8.362,-16.182,13.922)
C6: (-14.107,-12.929,14.702)
C5: (-13.157,-13.312,13.732)
C4: (-11.903,-13.673,14.191)
P: (-11.511,-15.262,8.134)
C4': (-9.088,-15.679,11.180)
C2': (-9.666,-15.924,13.441)
C2: (-12.474,-13.339,16.291)
N1: (-13.730,-12.964,15.999)
N3: (-11.489,-13.703,15.469)
N6: (-15.346,-12.526,14.410)
N7: (-13.217,-13.401,12.346)
N9: (-11.173,-13.996,13.071)
O5': (-10.858,-15.488,9.568)
O3': (-9.384,-17.908,12.108)
OP1: (-15.363,-10.591,6.308)
OP2: (-16.072,-12.206,8.168)
C3': (-11.202,-12.675,8.350)
C1': (-10.407,-10.728,9.416)
C5': (-12.746,-11.364,6.843)
O4': (-11.073,-10.330,8.230)
C8: (-12.603,-10.049,10.493)
O2': (-8.804,-12.353,8.669)
C6: (-12.056,-10.135,13.962)
C5: (-12.117,-10.143,12.558)
C4: (-10.967,-10.494,11.881)
P: (-15.212,-11.106,7.694)
C4': (-11.360,-11.495,7.408)
C2': (-10.075,-12.212,9.261)
C2: (-9.845,-10.778,13.752)
N1: (-10.878,-10.460,14.540)
N3: (-9.783,-10.827,12.424)
N6: (-13.092,-9.831,14.745)
N7: (-13.144,-9.859,11.667)
N9: (-11.287,-10.436,10.546)
O5': (-13.697,-11.547,7.881)
O3': (-10.892,-13.865,7.639)
Image (generated by PyMOL):
PyMOL image
show in jmol