ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3LQX:B27:B26

Extra

PDB:
ATOM 1 O3' A A 26 11.464 -0.938 9.091 1.00 30.13 O
ATOM 2 P A A 27 12.515 -0.446 10.203 1.00 30.51 P
ATOM 3 OP1 A A 27 11.816 0.541 11.074 1.00 30.50 O
ATOM 4 OP2 A A 27 13.784 -0.069 9.530 1.00 30.31 O
ATOM 5 O5' A A 27 12.790 -1.748 11.078 1.00 30.45 O
ATOM 6 C5' A A 27 11.746 -2.358 11.833 1.00 30.47 C
ATOM 7 C4' A A 27 12.225 -3.667 12.410 1.00 30.55 C
ATOM 8 O4' A A 27 12.420 -4.629 11.342 1.00 30.29 O
ATOM 9 C3' A A 27 13.569 -3.581 13.110 1.00 30.72 C
ATOM 10 O3' A A 27 13.390 -3.183 14.462 1.00 31.45 O
ATOM 11 C2' A A 27 14.099 -5.003 12.976 1.00 30.43 C
ATOM 12 O2' A A 27 13.569 -5.880 13.948 1.00 30.22 O
ATOM 13 C1' A A 27 13.597 -5.381 11.579 1.00 30.08 C
ATOM 14 N9 A A 27 14.544 -5.077 10.502 1.00 29.72 N
ATOM 15 C8 A A 27 14.827 -3.840 9.965 1.00 29.54 C
ATOM 16 N7 A A 27 15.701 -3.875 8.990 1.00 29.38 N
ATOM 17 C5 A A 27 16.022 -5.220 8.874 1.00 29.23 C
ATOM 18 C6 A A 27 16.892 -5.912 8.010 1.00 29.06 C
ATOM 19 N6 A A 27 17.626 -5.314 7.069 1.00 28.76 N
ATOM 20 N1 A A 27 16.980 -7.255 8.148 1.00 28.93 N
ATOM 21 C2 A A 27 16.244 -7.848 9.096 1.00 29.12 C
ATOM 22 N3 A A 27 15.394 -7.306 9.971 1.00 29.22 N
ATOM 23 C4 A A 27 15.325 -5.973 9.804 1.00 29.42 C
ATOM 24 P G A 28 14.485 -2.249 15.169 1.00 32.15 P
ATOM 25 OP1 G A 28 13.984 -1.966 16.542 1.00 32.25 O
ATOM 26 OP2 G A 28 14.804 -1.121 14.250 1.00 31.97 O
ATOM 27 O5' G A 28 15.753 -3.205 15.303 1.00 32.16 O
TER

ATOM 1 O3' A B 25 12.286 -1.251 2.851 1.00 29.18 O
ATOM 2 P A B 26 13.406 -0.777 3.898 1.00 29.54 P
ATOM 3 OP1 A B 26 13.414 0.717 3.911 1.00 29.58 O
ATOM 4 OP2 A B 26 14.659 -1.506 3.568 1.00 29.37 O
ATOM 5 O5' A B 26 12.870 -1.266 5.320 1.00 29.43 O
ATOM 6 C5' A B 26 11.640 -0.762 5.849 1.00 29.51 C
ATOM 7 C4' A B 26 11.054 -1.731 6.854 1.00 29.57 C
ATOM 8 O4' A B 26 10.991 -3.048 6.251 1.00 29.38 O
ATOM 9 C3' A B 26 11.839 -1.939 8.143 1.00 29.70 C
ATOM 10 O3' A B 26 11.464 -0.938 9.091 1.00 30.13 O
ATOM 11 C2' A B 26 11.378 -3.327 8.584 1.00 29.47 C
ATOM 12 O2' A B 26 10.118 -3.323 9.228 1.00 29.37 O
ATOM 13 C1' A B 26 11.207 -4.037 7.242 1.00 29.27 C
ATOM 14 N9 A B 26 12.313 -4.897 6.813 1.00 28.95 N
ATOM 15 C8 A B 26 13.272 -4.640 5.860 1.00 28.90 C
ATOM 16 N7 A B 26 14.072 -5.652 5.627 1.00 28.68 N
ATOM 17 C5 A B 26 13.628 -6.634 6.499 1.00 28.61 C
ATOM 18 C6 A B 26 14.041 -7.958 6.722 1.00 28.45 C
ATOM 19 N6 A B 26 15.024 -8.552 6.040 1.00 28.27 N
ATOM 20 N1 A B 26 13.393 -8.666 7.674 1.00 28.28 N
ATOM 21 C2 A B 26 12.393 -8.081 8.340 1.00 28.36 C
ATOM 22 N3 A B 26 11.900 -6.853 8.209 1.00 28.49 N
ATOM 23 C4 A B 26 12.565 -6.173 7.259 1.00 28.75 C
ATOM 24 P A B 27 12.515 -0.446 10.203 1.00 30.51 P
ATOM 25 OP1 A B 27 11.816 0.541 11.074 1.00 30.50 O
ATOM 26 OP2 A B 27 13.784 -0.069 9.530 1.00 30.31 O
ATOM 27 O5' A B 27 12.790 -1.748 11.078 1.00 30.45 O
TER

Atoms:
OP1: (11.816,0.541,11.074)
OP2: (13.784,-0.069,9.530)
C3': (13.569,-3.581,13.110)
C1': (13.597,-5.381,11.579)
C5': (11.746,-2.358,11.833)
O4': (12.420,-4.629,11.342)
C8: (14.827,-3.840,9.965)
O2': (13.569,-5.880,13.948)
C6: (16.892,-5.912,8.010)
C5: (16.022,-5.220,8.874)
C4: (15.325,-5.973,9.804)
P: (12.515,-0.446,10.203)
C4': (12.225,-3.667,12.410)
C2': (14.099,-5.003,12.976)
C2: (16.244,-7.848,9.096)
N1: (16.980,-7.255,8.148)
N3: (15.394,-7.306,9.971)
N6: (17.626,-5.314,7.069)
N7: (15.701,-3.875,8.990)
N9: (14.544,-5.077,10.502)
O5': (12.790,-1.748,11.078)
O3': (13.390,-3.183,14.462)
OP1: (13.414,0.717,3.911)
OP2: (14.659,-1.506,3.568)
C3': (11.839,-1.939,8.143)
C1': (11.207,-4.037,7.242)
C5': (11.640,-0.762,5.849)
O4': (10.991,-3.048,6.251)
C8: (13.272,-4.640,5.860)
O2': (10.118,-3.323,9.228)
C6: (14.041,-7.958,6.722)
C5: (13.628,-6.634,6.499)
C4: (12.565,-6.173,7.259)
P: (13.406,-0.777,3.898)
C4': (11.054,-1.731,6.854)
C2': (11.378,-3.327,8.584)
C2: (12.393,-8.081,8.340)
N1: (13.393,-8.666,7.674)
N3: (11.900,-6.853,8.209)
N6: (15.024,-8.552,6.040)
N7: (14.072,-5.652,5.627)
N9: (12.313,-4.897,6.813)
O5': (12.870,-1.266,5.320)
O3': (11.464,-0.938,9.091)
Image (generated by PyMOL):
PyMOL image
show in jmol