Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0654:0653
Extra
PDB:
ATOM 1 O3' A A 653 44.986 100.587 34.127 1.00 40.97 O
ATOM 2 P A A 654 44.347 101.802 33.298 1.00 44.80 P
ATOM 3 OP1 A A 654 44.182 102.905 34.268 1.00 44.51 O
ATOM 4 OP2 A A 654 43.170 101.335 32.521 1.00 43.89 O
ATOM 5 O5' A A 654 45.504 102.189 32.268 1.00 43.00 O
ATOM 6 C5' A A 654 46.784 102.643 32.741 1.00 40.11 C
ATOM 7 C4' A A 654 47.851 102.392 31.705 1.00 41.19 C
ATOM 8 O4' A A 654 47.938 100.965 31.442 1.00 41.60 O
ATOM 9 C3' A A 654 47.626 103.001 30.328 1.00 41.67 C
ATOM 10 O3' A A 654 47.998 104.373 30.274 1.00 41.45 O
ATOM 11 C2' A A 654 48.523 102.129 29.459 1.00 40.69 C
ATOM 12 O2' A A 654 49.891 102.454 29.607 1.00 41.30 O
ATOM 13 C1' A A 654 48.278 100.750 30.078 1.00 41.14 C
ATOM 14 N9 A A 654 47.168 100.040 29.436 1.00 40.03 N
ATOM 15 C8 A A 654 45.835 100.128 29.745 1.00 37.60 C
ATOM 16 N7 A A 654 45.067 99.385 28.992 1.00 36.70 N
ATOM 17 C5 A A 654 45.951 98.765 28.125 1.00 38.68 C
ATOM 18 C6 A A 654 45.753 97.861 27.072 1.00 38.65 C
ATOM 19 N6 A A 654 44.556 97.405 26.717 1.00 37.76 N
ATOM 20 N1 A A 654 46.840 97.437 26.392 1.00 38.04 N
ATOM 21 C2 A A 654 48.044 97.899 26.760 1.00 39.50 C
ATOM 22 N3 A A 654 48.356 98.752 27.735 1.00 39.44 N
ATOM 23 C4 A A 654 47.249 99.153 28.387 1.00 38.82 C
ATOM 24 P C A 655 46.936 105.474 29.759 1.00 43.77 P
ATOM 25 OP1 C A 655 47.650 106.776 29.790 1.00 44.38 O
ATOM 26 OP2 C A 655 45.649 105.326 30.496 1.00 42.17 O
ATOM 27 O5' C A 655 46.661 105.093 28.237 1.00 41.36 O
TER
ATOM 1 O3' U B 652 40.221 96.887 34.354 1.00 41.38 O
ATOM 2 P A B 653 40.758 98.286 33.780 1.00 41.76 P
ATOM 3 OP1 A B 653 40.371 99.309 34.783 1.00 40.84 O
ATOM 4 OP2 A B 653 40.305 98.435 32.372 1.00 40.49 O
ATOM 5 O5' A B 653 42.341 98.100 33.749 1.00 39.40 O
ATOM 6 C5' A B 653 43.117 98.156 34.958 1.00 38.67 C
ATOM 7 C4' A B 653 44.594 98.260 34.640 1.00 40.18 C
ATOM 8 O4' A B 653 45.116 97.009 34.117 1.00 39.11 O
ATOM 9 C3' A B 653 44.976 99.281 33.583 1.00 40.62 C
ATOM 10 O3' A B 653 44.986 100.587 34.127 1.00 40.97 O
ATOM 11 C2' A B 653 46.365 98.807 33.180 1.00 41.50 C
ATOM 12 O2' A B 653 47.357 99.155 34.123 1.00 40.70 O
ATOM 13 C1' A B 653 46.185 97.287 33.220 1.00 41.75 C
ATOM 14 N9 A B 653 45.890 96.685 31.916 1.00 40.77 N
ATOM 15 C8 A B 653 44.679 96.264 31.427 1.00 43.04 C
ATOM 16 N7 A B 653 44.752 95.693 30.250 1.00 41.40 N
ATOM 17 C5 A B 653 46.100 95.749 29.937 1.00 40.79 C
ATOM 18 C6 A B 653 46.832 95.288 28.829 1.00 40.15 C
ATOM 19 N6 A B 653 46.290 94.615 27.815 1.00 40.13 N
ATOM 20 N1 A B 653 48.161 95.534 28.807 1.00 40.56 N
ATOM 21 C2 A B 653 48.706 96.186 29.841 1.00 39.94 C
ATOM 22 N3 A B 653 48.125 96.644 30.948 1.00 39.48 N
ATOM 23 C4 A B 653 46.807 96.388 30.937 1.00 39.60 C
ATOM 24 P A B 654 44.347 101.802 33.298 1.00 44.80 P
ATOM 25 OP1 A B 654 44.182 102.905 34.268 1.00 44.51 O
ATOM 26 OP2 A B 654 43.170 101.335 32.521 1.00 43.89 O
ATOM 27 O5' A B 654 45.504 102.189 32.268 1.00 43.00 O
TER
ATOM 2 P A A 654 44.347 101.802 33.298 1.00 44.80 P
ATOM 3 OP1 A A 654 44.182 102.905 34.268 1.00 44.51 O
ATOM 4 OP2 A A 654 43.170 101.335 32.521 1.00 43.89 O
ATOM 5 O5' A A 654 45.504 102.189 32.268 1.00 43.00 O
ATOM 6 C5' A A 654 46.784 102.643 32.741 1.00 40.11 C
ATOM 7 C4' A A 654 47.851 102.392 31.705 1.00 41.19 C
ATOM 8 O4' A A 654 47.938 100.965 31.442 1.00 41.60 O
ATOM 9 C3' A A 654 47.626 103.001 30.328 1.00 41.67 C
ATOM 10 O3' A A 654 47.998 104.373 30.274 1.00 41.45 O
ATOM 11 C2' A A 654 48.523 102.129 29.459 1.00 40.69 C
ATOM 12 O2' A A 654 49.891 102.454 29.607 1.00 41.30 O
ATOM 13 C1' A A 654 48.278 100.750 30.078 1.00 41.14 C
ATOM 14 N9 A A 654 47.168 100.040 29.436 1.00 40.03 N
ATOM 15 C8 A A 654 45.835 100.128 29.745 1.00 37.60 C
ATOM 16 N7 A A 654 45.067 99.385 28.992 1.00 36.70 N
ATOM 17 C5 A A 654 45.951 98.765 28.125 1.00 38.68 C
ATOM 18 C6 A A 654 45.753 97.861 27.072 1.00 38.65 C
ATOM 19 N6 A A 654 44.556 97.405 26.717 1.00 37.76 N
ATOM 20 N1 A A 654 46.840 97.437 26.392 1.00 38.04 N
ATOM 21 C2 A A 654 48.044 97.899 26.760 1.00 39.50 C
ATOM 22 N3 A A 654 48.356 98.752 27.735 1.00 39.44 N
ATOM 23 C4 A A 654 47.249 99.153 28.387 1.00 38.82 C
ATOM 24 P C A 655 46.936 105.474 29.759 1.00 43.77 P
ATOM 25 OP1 C A 655 47.650 106.776 29.790 1.00 44.38 O
ATOM 26 OP2 C A 655 45.649 105.326 30.496 1.00 42.17 O
ATOM 27 O5' C A 655 46.661 105.093 28.237 1.00 41.36 O
TER
ATOM 1 O3' U B 652 40.221 96.887 34.354 1.00 41.38 O
ATOM 2 P A B 653 40.758 98.286 33.780 1.00 41.76 P
ATOM 3 OP1 A B 653 40.371 99.309 34.783 1.00 40.84 O
ATOM 4 OP2 A B 653 40.305 98.435 32.372 1.00 40.49 O
ATOM 5 O5' A B 653 42.341 98.100 33.749 1.00 39.40 O
ATOM 6 C5' A B 653 43.117 98.156 34.958 1.00 38.67 C
ATOM 7 C4' A B 653 44.594 98.260 34.640 1.00 40.18 C
ATOM 8 O4' A B 653 45.116 97.009 34.117 1.00 39.11 O
ATOM 9 C3' A B 653 44.976 99.281 33.583 1.00 40.62 C
ATOM 10 O3' A B 653 44.986 100.587 34.127 1.00 40.97 O
ATOM 11 C2' A B 653 46.365 98.807 33.180 1.00 41.50 C
ATOM 12 O2' A B 653 47.357 99.155 34.123 1.00 40.70 O
ATOM 13 C1' A B 653 46.185 97.287 33.220 1.00 41.75 C
ATOM 14 N9 A B 653 45.890 96.685 31.916 1.00 40.77 N
ATOM 15 C8 A B 653 44.679 96.264 31.427 1.00 43.04 C
ATOM 16 N7 A B 653 44.752 95.693 30.250 1.00 41.40 N
ATOM 17 C5 A B 653 46.100 95.749 29.937 1.00 40.79 C
ATOM 18 C6 A B 653 46.832 95.288 28.829 1.00 40.15 C
ATOM 19 N6 A B 653 46.290 94.615 27.815 1.00 40.13 N
ATOM 20 N1 A B 653 48.161 95.534 28.807 1.00 40.56 N
ATOM 21 C2 A B 653 48.706 96.186 29.841 1.00 39.94 C
ATOM 22 N3 A B 653 48.125 96.644 30.948 1.00 39.48 N
ATOM 23 C4 A B 653 46.807 96.388 30.937 1.00 39.60 C
ATOM 24 P A B 654 44.347 101.802 33.298 1.00 44.80 P
ATOM 25 OP1 A B 654 44.182 102.905 34.268 1.00 44.51 O
ATOM 26 OP2 A B 654 43.170 101.335 32.521 1.00 43.89 O
ATOM 27 O5' A B 654 45.504 102.189 32.268 1.00 43.00 O
TER
Atoms:
OP1: (44.182,102.905,34.268)
OP2: (43.170,101.335,32.521)
C3': (47.626,103.001,30.328)
C1': (48.278,100.750,30.078)
C5': (46.784,102.643,32.741)
O4': (47.938,100.965,31.442)
C8: (45.835,100.128,29.745)
O2': (49.891,102.454,29.607)
C6: (45.753,97.861,27.072)
C5: (45.951,98.765,28.125)
C4: (47.249,99.153,28.387)
P: (44.347,101.802,33.298)
C4': (47.851,102.392,31.705)
C2': (48.523,102.129,29.459)
C2: (48.044,97.899,26.760)
N1: (46.840,97.437,26.392)
N3: (48.356,98.752,27.735)
N6: (44.556,97.405,26.717)
N7: (45.067,99.385,28.992)
N9: (47.168,100.040,29.436)
O5': (45.504,102.189,32.268)
O3': (47.998,104.373,30.274)
OP2: (43.170,101.335,32.521)
C3': (47.626,103.001,30.328)
C1': (48.278,100.750,30.078)
C5': (46.784,102.643,32.741)
O4': (47.938,100.965,31.442)
C8: (45.835,100.128,29.745)
O2': (49.891,102.454,29.607)
C6: (45.753,97.861,27.072)
C5: (45.951,98.765,28.125)
C4: (47.249,99.153,28.387)
P: (44.347,101.802,33.298)
C4': (47.851,102.392,31.705)
C2': (48.523,102.129,29.459)
C2: (48.044,97.899,26.760)
N1: (46.840,97.437,26.392)
N3: (48.356,98.752,27.735)
N6: (44.556,97.405,26.717)
N7: (45.067,99.385,28.992)
N9: (47.168,100.040,29.436)
O5': (45.504,102.189,32.268)
O3': (47.998,104.373,30.274)
OP1: (40.371,99.309,34.783)
OP2: (40.305,98.435,32.372)
C3': (44.976,99.281,33.583)
C1': (46.185,97.287,33.220)
C5': (43.117,98.156,34.958)
O4': (45.116,97.009,34.117)
C8: (44.679,96.264,31.427)
O2': (47.357,99.155,34.123)
C6: (46.832,95.288,28.829)
C5: (46.100,95.749,29.937)
C4: (46.807,96.388,30.937)
P: (40.758,98.286,33.780)
C4': (44.594,98.260,34.640)
C2': (46.365,98.807,33.180)
C2: (48.706,96.186,29.841)
N1: (48.161,95.534,28.807)
N3: (48.125,96.644,30.948)
N6: (46.290,94.615,27.815)
N7: (44.752,95.693,30.250)
N9: (45.890,96.685,31.916)
O5': (42.341,98.100,33.749)
O3': (44.986,100.587,34.127)
OP2: (40.305,98.435,32.372)
C3': (44.976,99.281,33.583)
C1': (46.185,97.287,33.220)
C5': (43.117,98.156,34.958)
O4': (45.116,97.009,34.117)
C8: (44.679,96.264,31.427)
O2': (47.357,99.155,34.123)
C6: (46.832,95.288,28.829)
C5: (46.100,95.749,29.937)
C4: (46.807,96.388,30.937)
P: (40.758,98.286,33.780)
C4': (44.594,98.260,34.640)
C2': (46.365,98.807,33.180)
C2: (48.706,96.186,29.841)
N1: (48.161,95.534,28.807)
N3: (48.125,96.644,30.948)
N6: (46.290,94.615,27.815)
N7: (44.752,95.693,30.250)
N9: (45.890,96.685,31.916)
O5': (42.341,98.100,33.749)
O3': (44.986,100.587,34.127)
Image (generated by PyMOL):